RNA–Protein interactions for RNA: ENST00000592991.1

LDLRAD4-218, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 1,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-218ENST00000592991 NKX2-3Q8TAU0 364 aa30.38■■■□□ 2.45
LDLRAD4-218ENST00000592991 SNX21Q969T3 373 aa30.38■■■□□ 2.45
LDLRAD4-218ENST00000592991 CYP46A1Q9Y6A2 500 aa30.38■■■□□ 2.45
LDLRAD4-218ENST00000592991 GJA3Q9Y6H8 435 aa30.38■■■□□ 2.45
LDLRAD4-218ENST00000592991 DDX60LQ5H9U9 1706 aaKnown RBP30.38■■■□□ 2.45
LDLRAD4-218ENST00000592991 PPARAQ07869 468 aa30.37■■■□□ 2.45
LDLRAD4-218ENST00000592991 TNIP1Q15025 636 aa30.37■■■□□ 2.45
LDLRAD4-218ENST00000592991 RUFY3Q7L099 469 aa30.37■■■□□ 2.45
LDLRAD4-218ENST00000592991 HSCBQ8IWL3 235 aa30.37■■■□□ 2.45
LDLRAD4-218ENST00000592991 AGBL3Q8NEM8 1001 aa30.37■■■□□ 2.45
LDLRAD4-218ENST00000592991 MRIQ9BWK5 157 aa30.37■■■□□ 2.45
LDLRAD4-218ENST00000592991 MCM9Q9NXL9 1143 aa30.37■■■□□ 2.45
LDLRAD4-218ENST00000592991 SAP30BPQ9UHR5 308 aaKnown RBP30.37■■■□□ 2.45
LDLRAD4-218ENST00000592991 FLT1P17948 1338 aa30.37■■■□□ 2.45
LDLRAD4-218ENST00000592991 ST18O60284 1047 aa30.36■■■□□ 2.45
LDLRAD4-218ENST00000592991 CERS3Q8IU89 383 aa30.36■■■□□ 2.45
LDLRAD4-218ENST00000592991 TTC14Q96N46 770 aa30.36■■■□□ 2.45
LDLRAD4-218ENST00000592991 NEDD4P46934 1319 aa30.36■■■□□ 2.45
LDLRAD4-218ENST00000592991 RPS6KB1P23443 525 aa30.36■■■□□ 2.45
LDLRAD4-218ENST00000592991 CACNB3P54284 484 aa30.36■■■□□ 2.45
LDLRAD4-218ENST00000592991 PICALMQ13492 652 aa30.36■■■□□ 2.45
LDLRAD4-218ENST00000592991 BECN1Q14457 450 aa30.36■■■□□ 2.45
LDLRAD4-218ENST00000592991 MYH1P12882 1939 aa30.35■■■□□ 2.45
LDLRAD4-218ENST00000592991 WDHD1O75717 1129 aaPredicted RBP30.35■■■□□ 2.45
LDLRAD4-218ENST00000592991 GPR162Q16538 588 aa30.35■■■□□ 2.45
LDLRAD4-218ENST00000592991 LARP6Q9BRS8 491 aaKnown RBP30.35■■■□□ 2.45
LDLRAD4-218ENST00000592991 DDX4Q9NQI0 724 aaKnown RBP30.35■■■□□ 2.45
LDLRAD4-218ENST00000592991 PDRG1Q9NUG6 133 aa30.35■■■□□ 2.45
LDLRAD4-218ENST00000592991 PRMT6Q96LA8 375 aaPredicted RBP30.34■■■□□ 2.45
LDLRAD4-218ENST00000592991 RNF181Q9P0P0 153 aa30.34■■■□□ 2.45
LDLRAD4-218ENST00000592991 HDAC9Q9UKV0 1011 aa30.34■■■□□ 2.45
LDLRAD4-218ENST00000592991 CHST3Q7LGC8 479 aa30.33■■■□□ 2.45
LDLRAD4-218ENST00000592991 LRRC2Q9BYS8 371 aa30.33■■■□□ 2.45
LDLRAD4-218ENST00000592991 GMPSP49915 693 aaPredicted RBP30.33■■■□□ 2.45
LDLRAD4-218ENST00000592991 AK2P54819 239 aa30.33■■■□□ 2.45
LDLRAD4-218ENST00000592991 NFIAQ12857 509 aa30.33■■■□□ 2.45
LDLRAD4-218ENST00000592991 OGFOD1Q8N543 542 aa30.33■■■□□ 2.45
LDLRAD4-218ENST00000592991 TDRD3Q9H7E2 651 aaKnown RBP30.33■■■□□ 2.45
LDLRAD4-218ENST00000592991 ARPP21Q9UBL0 812 aaPredicted RBP30.33■■■□□ 2.45
LDLRAD4-218ENST00000592991 AKNAD1Q5T1N1 836 aa30.31■■■□□ 2.44
LDLRAD4-218ENST00000592991 ANAPC4Q9UJX5 808 aa30.31■■■□□ 2.44
LDLRAD4-218ENST00000592991 B4E1Z4 1266 aa30.3■■■□□ 2.44
LDLRAD4-218ENST00000592991 SBK1Q52WX2 424 aa30.3■■■□□ 2.44
LDLRAD4-218ENST00000592991 MB21D2Q8IYB1 491 aaPredicted RBP30.3■■■□□ 2.44
LDLRAD4-218ENST00000592991 NCOA7Q8NI08 942 aa30.3■■■□□ 2.44
LDLRAD4-218ENST00000592991 STAG1Q8WVM7 1258 aa30.3■■■□□ 2.44
LDLRAD4-218ENST00000592991 SPDYE2BA6NHP3 402 aa30.29■■■□□ 2.44
LDLRAD4-218ENST00000592991 K7ELQ4 463 aaPredicted RBP30.29■■■□□ 2.44
LDLRAD4-218ENST00000592991 SPDYE6P0CI01 402 aa30.29■■■□□ 2.44
LDLRAD4-218ENST00000592991 DLGAP5Q15398 846 aa30.29■■■□□ 2.44
LDLRAD4-218ENST00000592991 RRP12Q5JTH9 1297 aaKnown RBP30.29■■■□□ 2.44
LDLRAD4-218ENST00000592991 C9orf131Q5VYM1 1079 aa30.29■■■□□ 2.44
LDLRAD4-218ENST00000592991 RALYLQ86SE5 291 aaKnown RBP30.29■■■□□ 2.44
LDLRAD4-218ENST00000592991 PLCD1P51178 756 aa30.29■■■□□ 2.44
LDLRAD4-218ENST00000592991 C12orf60Q5U649 245 aa30.29■■■□□ 2.44
LDLRAD4-218ENST00000592991 MFSD6Q6ZSS7 791 aa30.29■■■□□ 2.44
LDLRAD4-218ENST00000592991 SPRYD3Q8NCJ5 442 aa30.29■■■□□ 2.44
LDLRAD4-218ENST00000592991 TOMM22Q9NS69 142 aa30.29■■■□□ 2.44
LDLRAD4-218ENST00000592991 PRDM1O75626 825 aa30.28■■■□□ 2.44
LDLRAD4-218ENST00000592991 POLR3DP05423 398 aaPredicted RBP30.28■■■□□ 2.44
LDLRAD4-218ENST00000592991 ANTXR2P58335 489 aa30.28■■■□□ 2.44
LDLRAD4-218ENST00000592991 DHX32Q7L7V1 743 aaKnown RBP30.28■■■□□ 2.44
LDLRAD4-218ENST00000592991 DYNLL2Q96FJ2 89 aa30.28■■■□□ 2.44
LDLRAD4-218ENST00000592991 CLRN2A0PK11 232 aa30.27■■■□□ 2.44
LDLRAD4-218ENST00000592991 EGFRP00533 1210 aa30.27■■■□□ 2.44
LDLRAD4-218ENST00000592991 RPS12P25398 132 aaKnown RBP30.27■■■□□ 2.44
LDLRAD4-218ENST00000592991 TRDNQ13061 729 aa30.27■■■□□ 2.44
LDLRAD4-218ENST00000592991 CYB5R4Q7L1T6 521 aa30.27■■■□□ 2.44
LDLRAD4-218ENST00000592991 ZFPM1Q8IX07 1006 aa30.27■■■□□ 2.44
LDLRAD4-218ENST00000592991 MICALL2Q8IY33 904 aa30.27■■■□□ 2.44
LDLRAD4-218ENST00000592991 DAXXQ9UER7 740 aaPredicted RBP30.27■■■□□ 2.44
LDLRAD4-218ENST00000592991 EXOSC10Q01780 885 aaKnown RBP30.26■■■□□ 2.44
LDLRAD4-218ENST00000592991 TCP10Q12799 353 aa30.26■■■□□ 2.44
LDLRAD4-218ENST00000592991 TOB2Q14106 344 aaPredicted RBP30.26■■■□□ 2.44
LDLRAD4-218ENST00000592991 Q6ZUG5 572 aa30.26■■■□□ 2.44
LDLRAD4-218ENST00000592991 MYOZ2Q9NPC6 264 aa30.26■■■□□ 2.44
LDLRAD4-218ENST00000592991 HMGB1P09429 215 aaKnown RBP30.25■■■□□ 2.43
LDLRAD4-218ENST00000592991 RBM26Q5T8P6 1007 aaKnown RBP30.25■■■□□ 2.43
LDLRAD4-218ENST00000592991 OSBPL5Q9H0X9 879 aaPredicted RBP30.25■■■□□ 2.43
LDLRAD4-218ENST00000592991 GPHNQ9NQX3 736 aaPredicted RBP30.25■■■□□ 2.43
LDLRAD4-218ENST00000592991 FAM198AQ9UFP1 575 aa30.25■■■□□ 2.43
LDLRAD4-218ENST00000592991 PRC1O43663 620 aa30.25■■■□□ 2.43
LDLRAD4-218ENST00000592991 ZNF280AP59817 542 aaPredicted RBP30.25■■■□□ 2.43
LDLRAD4-218ENST00000592991 CNOT7Q9UIV1 285 aaKnown RBP30.25■■■□□ 2.43
LDLRAD4-218ENST00000592991 KDM4AO75164 1064 aa30.24■■■□□ 2.43
LDLRAD4-218ENST00000592991 AMOTL1Q8IY63 956 aa30.24■■■□□ 2.43
LDLRAD4-218ENST00000592991 SLC44A5Q8NCS7 719 aa30.24■■■□□ 2.43
LDLRAD4-218ENST00000592991 RNF41Q9H4P4 317 aaPredicted RBP30.24■■■□□ 2.43
LDLRAD4-218ENST00000592991 NBPF9Q3BBW0 867 aa30.23■■■□□ 2.43
LDLRAD4-218ENST00000592991 SAMD7Q7Z3H4 446 aa30.23■■■□□ 2.43
LDLRAD4-218ENST00000592991 ZBED3Q96IU2 234 aaPredicted RBP30.23■■■□□ 2.43
LDLRAD4-218ENST00000592991 ZNF70Q9UC06 446 aaPredicted RBP30.23■■■□□ 2.43
LDLRAD4-218ENST00000592991 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.23■■■□□ 2.43
LDLRAD4-218ENST00000592991 ROBO3Q96MS0 1386 aa30.23■■■□□ 2.43
LDLRAD4-218ENST00000592991 LARGE1O95461 756 aa30.22■■■□□ 2.43
LDLRAD4-218ENST00000592991 MCM5P33992 734 aa30.22■■■□□ 2.43
LDLRAD4-218ENST00000592991 MTMR14Q8NCE2 650 aa30.22■■■□□ 2.43
LDLRAD4-218ENST00000592991 DPF2Q92785 391 aa30.22■■■□□ 2.43
LDLRAD4-218ENST00000592991 TMX3Q96JJ7 454 aa30.22■■■□□ 2.43
LDLRAD4-218ENST00000592991 IDI2Q9BXS1 227 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms