RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 MRPL50Q8N5N7 158 aaKnown RBP18.92■□□□□ 0.62
SF3A2-204ENST00000589118 SLAIN1Q8ND83 568 aa18.92■□□□□ 0.62
SF3A2-204ENST00000589118 WDR66Q8TBY9 1149 aa18.92■□□□□ 0.62
SF3A2-204ENST00000589118 USP44Q9H0E7 712 aa18.92■□□□□ 0.62
SF3A2-204ENST00000589118 EYA2O00167 538 aa18.91■□□□□ 0.62
SF3A2-204ENST00000589118 CXCL11O14625 94 aa18.91■□□□□ 0.62
SF3A2-204ENST00000589118 SLC5A1P13866 664 aa18.91■□□□□ 0.62
SF3A2-204ENST00000589118 PTPRAP18433 802 aa18.91■□□□□ 0.62
SF3A2-204ENST00000589118 RGS3P49796 1198 aa18.91■□□□□ 0.62
SF3A2-204ENST00000589118 ATG9AQ7Z3C6 839 aa18.91■□□□□ 0.62
SF3A2-204ENST00000589118 PAWRQ96IZ0 340 aaKnown RBP18.91■□□□□ 0.62
SF3A2-204ENST00000589118 SIL1Q9H173 461 aa18.91■□□□□ 0.62
SF3A2-204ENST00000589118 AFG3L2Q9Y4W6 797 aa18.91■□□□□ 0.62
SF3A2-204ENST00000589118 ATRNL1Q5VV63 1379 aa18.91■□□□□ 0.62
SF3A2-204ENST00000589118 A0A0G2JLL6 359 aaPredicted RBP18.9■□□□□ 0.62
SF3A2-204ENST00000589118 PRRT2Q7Z6L0 340 aaPredicted RBP18.9■□□□□ 0.62
SF3A2-204ENST00000589118 LPIN2Q92539 896 aa18.9■□□□□ 0.62
SF3A2-204ENST00000589118 DDTLA6NHG4 134 aaPredicted RBP18.89■□□□□ 0.61
SF3A2-204ENST00000589118 TRIM75PA6NK02 468 aa18.89■□□□□ 0.61
SF3A2-204ENST00000589118 TNPO2O14787 897 aaKnown RBP18.89■□□□□ 0.61
SF3A2-204ENST00000589118 LDHBP07195 334 aaKnown RBP18.89■□□□□ 0.61
SF3A2-204ENST00000589118 SCYL3Q8IZE3 742 aa18.89■□□□□ 0.61
SF3A2-204ENST00000589118 ANKRD13CQ8N6S4 541 aa18.89■□□□□ 0.61
SF3A2-204ENST00000589118 DOCK1Q14185 1865 aa18.88■□□□□ 0.61
SF3A2-204ENST00000589118 FAM196BA6NMK8 535 aa18.88■□□□□ 0.61
SF3A2-204ENST00000589118 PHKA1P46020 1223 aa18.88■□□□□ 0.61
SF3A2-204ENST00000589118 TRIM32Q13049 653 aa18.88■□□□□ 0.61
SF3A2-204ENST00000589118 TREML2Q5T2D2 321 aa18.88■□□□□ 0.61
SF3A2-204ENST00000589118 ZSCAN29Q8IWY8 852 aaPredicted RBP18.88■□□□□ 0.61
SF3A2-204ENST00000589118 DDX4Q9NQI0 724 aaKnown RBP18.88■□□□□ 0.61
SF3A2-204ENST00000589118 PICK1Q9NRD5 415 aa18.88■□□□□ 0.61
SF3A2-204ENST00000589118 ZMYND8Q9ULU4 1186 aaPredicted RBP18.88■□□□□ 0.61
SF3A2-204ENST00000589118 KIF16BQ96L93 1317 aa18.88■□□□□ 0.61
SF3A2-204ENST00000589118 ADORA1P30542 326 aa18.87■□□□□ 0.61
SF3A2-204ENST00000589118 PICALMQ13492 652 aa18.87■□□□□ 0.61
SF3A2-204ENST00000589118 Q7L0L9 218 aa18.87■□□□□ 0.61
SF3A2-204ENST00000589118 FASTKD5Q7L8L6 764 aaKnown RBP18.87■□□□□ 0.61
SF3A2-204ENST00000589118 FAM9BQ8IZU0 186 aa18.87■□□□□ 0.61
SF3A2-204ENST00000589118 SYN1P17600 705 aa18.86■□□□□ 0.61
SF3A2-204ENST00000589118 ATP2B3Q16720 1220 aa18.86■□□□□ 0.61
SF3A2-204ENST00000589118 C7orf61Q8IZ16 206 aa18.86■□□□□ 0.61
SF3A2-204ENST00000589118 SMCR8Q8TEV9 937 aaPredicted RBP18.86■□□□□ 0.61
SF3A2-204ENST00000589118 PAK6Q9NQU5 681 aaPredicted RBP18.86■□□□□ 0.61
SF3A2-204ENST00000589118 LRRFIP2Q9Y608 721 aaKnown RBP18.86■□□□□ 0.61
SF3A2-204ENST00000589118 COL6A3P12111 3177 aa18.85■□□□□ 0.61
SF3A2-204ENST00000589118 PEX10O60683 326 aa18.85■□□□□ 0.61
SF3A2-204ENST00000589118 PXYLP1Q8TE99 480 aa18.85■□□□□ 0.61
SF3A2-204ENST00000589118 CRISPLD2Q9H0B8 497 aa18.85■□□□□ 0.61
SF3A2-204ENST00000589118 PA2G4Q9UQ80 394 aaKnown RBP18.85■□□□□ 0.61
SF3A2-204ENST00000589118 LAMA3Q16787 3333 aa18.84■□□□□ 0.61
SF3A2-204ENST00000589118 SSH1Q8WYL5 1049 aa18.84■□□□□ 0.61
SF3A2-204ENST00000589118 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.84■□□□□ 0.61
SF3A2-204ENST00000589118 PLXNB2O15031 1838 aa18.84■□□□□ 0.61
SF3A2-204ENST00000589118 ENTPD3O75355 529 aa18.83■□□□□ 0.6
SF3A2-204ENST00000589118 IRF5Q13568 498 aa18.83■□□□□ 0.6
SF3A2-204ENST00000589118 IDI2Q9BXS1 227 aa18.83■□□□□ 0.6
SF3A2-204ENST00000589118 ABCF2Q9UG63 623 aa18.83■□□□□ 0.6
SF3A2-204ENST00000589118 DDX60LQ5H9U9 1706 aaKnown RBP18.83■□□□□ 0.6
SF3A2-204ENST00000589118 RFX7Q2KHR2 1363 aa18.82■□□□□ 0.6
SF3A2-204ENST00000589118 ATAD5Q96QE3 1844 aa18.82■□□□□ 0.6
SF3A2-204ENST00000589118 MAP3K10Q02779 954 aa18.82■□□□□ 0.6
SF3A2-204ENST00000589118 RRP1BQ14684 758 aaKnown RBP18.82■□□□□ 0.6
SF3A2-204ENST00000589118 GDF15Q99988 308 aa18.82■□□□□ 0.6
SF3A2-204ENST00000589118 CEP126Q9P2H0 1117 aa18.82■□□□□ 0.6
SF3A2-204ENST00000589118 GAKO14976 1311 aa18.81■□□□□ 0.6
SF3A2-204ENST00000589118 SALL1Q9NSC2 1324 aa18.81■□□□□ 0.6
SF3A2-204ENST00000589118 CTNND1O60716 968 aaKnown RBP18.81■□□□□ 0.6
SF3A2-204ENST00000589118 BTDP43251 543 aa18.81■□□□□ 0.6
SF3A2-204ENST00000589118 MNX1P50219 401 aaPredicted RBP18.81■□□□□ 0.6
SF3A2-204ENST00000589118 TIMM10P62072 90 aa18.81■□□□□ 0.6
SF3A2-204ENST00000589118 CCDC102BQ68D86 513 aa18.81■□□□□ 0.6
SF3A2-204ENST00000589118 NECAB2Q7Z6G3 386 aa18.81■□□□□ 0.6
SF3A2-204ENST00000589118 COA7Q96BR5 231 aa18.81■□□□□ 0.6
SF3A2-204ENST00000589118 GNL3LQ9NVN8 582 aaKnown RBP18.81■□□□□ 0.6
SF3A2-204ENST00000589118 DENND2AQ9ULE3 1009 aa18.81■□□□□ 0.6
SF3A2-204ENST00000589118 AGTPBP1Q9UPW5 1226 aa18.81■□□□□ 0.6
SF3A2-204ENST00000589118 SLC45A1Q9Y2W3 748 aa18.81■□□□□ 0.6
SF3A2-204ENST00000589118 A0A1W2PPC1 479 aa18.8■□□□□ 0.6
SF3A2-204ENST00000589118 SPP2Q13103 211 aa18.8■□□□□ 0.6
SF3A2-204ENST00000589118 ZNF384Q8TF68 577 aa18.8■□□□□ 0.6
SF3A2-204ENST00000589118 GJD2Q9UKL4 321 aa18.8■□□□□ 0.6
SF3A2-204ENST00000589118 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.8■□□□□ 0.6
SF3A2-204ENST00000589118 PTPRCP08575 1304 aa18.79■□□□□ 0.6
SF3A2-204ENST00000589118 RASGRF1Q13972 1273 aa18.79■□□□□ 0.6
SF3A2-204ENST00000589118 DZIP1Q86YF9 867 aaKnown RBP18.79■□□□□ 0.6
SF3A2-204ENST00000589118 DEFB123Q8N688 67 aa18.79■□□□□ 0.6
SF3A2-204ENST00000589118 LOC285556D6RIA3 1793 aa18.78■□□□□ 0.6
SF3A2-204ENST00000589118 HMGCS2P54868 508 aa18.78■□□□□ 0.6
SF3A2-204ENST00000589118 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.78■□□□□ 0.6
SF3A2-204ENST00000589118 ZNF521Q96K83 1311 aa18.77■□□□□ 0.6
SF3A2-204ENST00000589118 CYP2B6P20813 491 aa18.77■□□□□ 0.6
SF3A2-204ENST00000589118 MAGEA10P43363 369 aaPredicted RBP18.77■□□□□ 0.6
SF3A2-204ENST00000589118 RHBDL3P58872 404 aa18.77■□□□□ 0.6
SF3A2-204ENST00000589118 MECOMQ03112 1051 aa18.77■□□□□ 0.6
SF3A2-204ENST00000589118 TBC1D9Q6ZT07 1266 aa18.77■□□□□ 0.6
SF3A2-204ENST00000589118 CIAO1O76071 339 aa18.76■□□□□ 0.59
SF3A2-204ENST00000589118 HMGCRP04035 888 aa18.76■□□□□ 0.59
SF3A2-204ENST00000589118 BMP8BP34820 402 aa18.76■□□□□ 0.59
SF3A2-204ENST00000589118 FAM110CQ1W6H9 321 aa18.76■□□□□ 0.59
SF3A2-204ENST00000589118 PI16Q6UXB8 463 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms