RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 MKRN1Q9UHC7 482 aaKnown RBP17.23■□□□□ 0.35
NPC1-207ENST00000588867 FLT1P17948 1338 aa17.22■□□□□ 0.35
NPC1-207ENST00000588867 CDK5RAP2Q96SN8 1893 aa17.22■□□□□ 0.35
NPC1-207ENST00000588867 WDHD1O75717 1129 aaPredicted RBP17.22■□□□□ 0.35
NPC1-207ENST00000588867 POLR3DP05423 398 aaPredicted RBP17.22■□□□□ 0.35
NPC1-207ENST00000588867 PSMA5P28066 241 aa17.22■□□□□ 0.35
NPC1-207ENST00000588867 NEK4P51957 841 aa17.22■□□□□ 0.35
NPC1-207ENST00000588867 AMOTL1Q8IY63 956 aa17.22■□□□□ 0.35
NPC1-207ENST00000588867 H7C1D1 291 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 CYP2D6P10635 497 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 CPA1P15085 419 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 MMP14P50281 582 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 ZNF280AP59817 542 aaPredicted RBP17.21■□□□□ 0.35
NPC1-207ENST00000588867 NFIAQ12857 509 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 DPY19L2Q6NUT2 758 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 STOX1Q6ZVD7 989 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 SAMD7Q7Z3H4 446 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 IL17RAQ96F46 866 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 NEK1Q96PY6 1258 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 DDX4Q9NQI0 724 aaKnown RBP17.21■□□□□ 0.35
NPC1-207ENST00000588867 ARPP21Q9UBL0 812 aaPredicted RBP17.21■□□□□ 0.35
NPC1-207ENST00000588867 CLRN2A0PK11 232 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 MYO1BO43795 1136 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 TCP10Q12799 353 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 TBC1D10CQ8IV04 446 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 MTMR14Q8NCE2 650 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 NBPF3Q9H094 633 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 INCENPQ9NQS7 918 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 TMOD2Q9NZR1 351 aa17.21■□□□□ 0.35
NPC1-207ENST00000588867 ECM29Q5VYK3 1845 aa17.2■□□□□ 0.34
NPC1-207ENST00000588867 DCAF8L1A6NGE4 600 aa17.2■□□□□ 0.34
NPC1-207ENST00000588867 SMIM22K7EJ46 135 aa17.2■□□□□ 0.34
NPC1-207ENST00000588867 NBPF9Q3BBW0 867 aa17.2■□□□□ 0.34
NPC1-207ENST00000588867 TBC1D10BQ4KMP7 808 aaPredicted RBP17.2■□□□□ 0.34
NPC1-207ENST00000588867 SBK1Q52WX2 424 aa17.2■□□□□ 0.34
NPC1-207ENST00000588867 BLOC1S2Q6QNY1 142 aa17.2■□□□□ 0.34
NPC1-207ENST00000588867 GPRC5DQ9NZD1 345 aa17.2■□□□□ 0.34
NPC1-207ENST00000588867 WNT10BO00744 389 aa17.2■□□□□ 0.34
NPC1-207ENST00000588867 EGFRP00533 1210 aa17.2■□□□□ 0.34
NPC1-207ENST00000588867 EVX2Q03828 476 aa17.2■□□□□ 0.34
NPC1-207ENST00000588867 TRDNQ13061 729 aa17.2■□□□□ 0.34
NPC1-207ENST00000588867 MFSD6Q6ZSS7 791 aa17.2■□□□□ 0.34
NPC1-207ENST00000588867 TM6SF1Q9BZW5 370 aa17.2■□□□□ 0.34
NPC1-207ENST00000588867 VEZTQ9HBM0 779 aa17.2■□□□□ 0.34
NPC1-207ENST00000588867 ZSWIM6Q9HCJ5 1215 aa17.2■□□□□ 0.34
NPC1-207ENST00000588867 TOMM22Q9NS69 142 aa17.2■□□□□ 0.34
NPC1-207ENST00000588867 ZNF70Q9UC06 446 aaPredicted RBP17.2■□□□□ 0.34
NPC1-207ENST00000588867 CYP46A1Q9Y6A2 500 aa17.2■□□□□ 0.34
NPC1-207ENST00000588867 NAV1Q8NEY1 1877 aa17.19■□□□□ 0.34
NPC1-207ENST00000588867 AKNAD1Q5T1N1 836 aa17.19■□□□□ 0.34
NPC1-207ENST00000588867 C12orf60Q5U649 245 aa17.19■□□□□ 0.34
NPC1-207ENST00000588867 IDI2Q9BXS1 227 aa17.19■□□□□ 0.34
NPC1-207ENST00000588867 MYH1P12882 1939 aa17.19■□□□□ 0.34
NPC1-207ENST00000588867 TCP10L2B9ZVM9 353 aa17.18■□□□□ 0.34
NPC1-207ENST00000588867 SLC3A2P08195 630 aaKnown RBP17.18■□□□□ 0.34
NPC1-207ENST00000588867 LMOD1P29536 600 aaPredicted RBP17.18■□□□□ 0.34
NPC1-207ENST00000588867 EPS15P42566 896 aa17.18■□□□□ 0.34
NPC1-207ENST00000588867 PLCD1P51178 756 aa17.18■□□□□ 0.34
NPC1-207ENST00000588867 COL9A3Q14050 684 aaPredicted RBP17.18■□□□□ 0.34
NPC1-207ENST00000588867 KIF4BQ2VIQ3 1234 aa17.18■□□□□ 0.34
NPC1-207ENST00000588867 RRP12Q5JTH9 1297 aaKnown RBP17.18■□□□□ 0.34
NPC1-207ENST00000588867 RUFY3Q7L099 469 aa17.18■□□□□ 0.34
NPC1-207ENST00000588867 RALYLQ86SE5 291 aaKnown RBP17.18■□□□□ 0.34
NPC1-207ENST00000588867 NCOA7Q8NI08 942 aa17.18■□□□□ 0.34
NPC1-207ENST00000588867 OSBPL5Q9H0X9 879 aaPredicted RBP17.18■□□□□ 0.34
NPC1-207ENST00000588867 FAM198AQ9UFP1 575 aa17.18■□□□□ 0.34
NPC1-207ENST00000588867 ANAPC4Q9UJX5 808 aa17.18■□□□□ 0.34
NPC1-207ENST00000588867 LAMA4Q16363 1823 aa17.18■□□□□ 0.34
NPC1-207ENST00000588867 FOCADQ5VW36 1801 aa17.18■□□□□ 0.34
NPC1-207ENST00000588867 ST18O60284 1047 aa17.18■□□□□ 0.34
NPC1-207ENST00000588867 SPDYE2Q495Y8 402 aa17.18■□□□□ 0.34
NPC1-207ENST00000588867 ZFPM1Q8IX07 1006 aa17.18■□□□□ 0.34
NPC1-207ENST00000588867 ZBED3Q96IU2 234 aaPredicted RBP17.18■□□□□ 0.34
NPC1-207ENST00000588867 TCEANC2Q96MN5 208 aa17.18■□□□□ 0.34
NPC1-207ENST00000588867 HMGB1P09429 215 aaKnown RBP17.17■□□□□ 0.34
NPC1-207ENST00000588867 ZSCAN29Q8IWY8 852 aaPredicted RBP17.17■□□□□ 0.34
NPC1-207ENST00000588867 STAG1Q8WVM7 1258 aa17.17■□□□□ 0.34
NPC1-207ENST00000588867 RNF41Q9H4P4 317 aaPredicted RBP17.17■□□□□ 0.34
NPC1-207ENST00000588867 PDRG1Q9NUG6 133 aa17.17■□□□□ 0.34
NPC1-207ENST00000588867 TACC3Q9Y6A5 838 aa17.17■□□□□ 0.34
NPC1-207ENST00000588867 NEDD4P46934 1319 aa17.16■□□□□ 0.34
NPC1-207ENST00000588867 RPS6KB1P23443 525 aa17.16■□□□□ 0.34
NPC1-207ENST00000588867 CHST3Q7LGC8 479 aa17.16■□□□□ 0.34
NPC1-207ENST00000588867 TTC6Q86TZ1 520 aa17.16■□□□□ 0.34
NPC1-207ENST00000588867 DYNLL2Q96FJ2 89 aa17.16■□□□□ 0.34
NPC1-207ENST00000588867 B4E1Z4 1266 aa17.16■□□□□ 0.34
NPC1-207ENST00000588867 PRDM1O75626 825 aa17.16■□□□□ 0.34
NPC1-207ENST00000588867 DHX32Q7L7V1 743 aaKnown RBP17.16■□□□□ 0.34
NPC1-207ENST00000588867 CNNM2Q9H8M5 875 aa17.16■□□□□ 0.34
NPC1-207ENST00000588867 ZC3H4Q9UPT8 1303 aaKnown RBP17.15■□□□□ 0.34
NPC1-207ENST00000588867 ENTPD3O75355 529 aa17.15■□□□□ 0.34
NPC1-207ENST00000588867 CD2BP2O95400 341 aaKnown RBP17.15■□□□□ 0.34
NPC1-207ENST00000588867 PDE4BQ07343 736 aa17.15■□□□□ 0.34
NPC1-207ENST00000588867 NOL8Q76FK4 1167 aaKnown RBP17.15■□□□□ 0.34
NPC1-207ENST00000588867 KRT23Q9C075 422 aa17.15■□□□□ 0.34
NPC1-207ENST00000588867 LAMB1P07942 1786 aa17.15■□□□□ 0.34
NPC1-207ENST00000588867 GLTPD2A6NH11 291 aa17.14■□□□□ 0.34
NPC1-207ENST00000588867 NPM3O75607 178 aaKnown RBP17.14■□□□□ 0.34
NPC1-207ENST00000588867 HLA-DOAP06340 250 aa17.14■□□□□ 0.34
NPC1-207ENST00000588867 FGD1P98174 961 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms