RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 SLC51AQ86UW1 340 aa19.99■□□□□ 0.79
SREBF1-218ENST00000578469 TBC1D22AQ8WUA7 517 aa19.99■□□□□ 0.79
SREBF1-218ENST00000578469 EYA3Q99504 573 aa19.99■□□□□ 0.79
SREBF1-218ENST00000578469 RIOK1Q9BRS2 568 aaKnown RBP19.99■□□□□ 0.79
SREBF1-218ENST00000578469 ZC3H12CQ9C0D7 883 aaKnown RBP19.99■□□□□ 0.79
SREBF1-218ENST00000578469 COA1Q9GZY4 146 aa19.99■□□□□ 0.79
SREBF1-218ENST00000578469 EPB41L4AQ9HCS5 686 aaPredicted RBP19.99■□□□□ 0.79
SREBF1-218ENST00000578469 MAST2Q6P0Q8 1798 aa19.98■□□□□ 0.79
SREBF1-218ENST00000578469 DDX11L8A8MPP1 907 aa19.98■□□□□ 0.79
SREBF1-218ENST00000578469 PRKAB2O43741 272 aa19.98■□□□□ 0.79
SREBF1-218ENST00000578469 PDIA4P13667 645 aaKnown RBP19.98■□□□□ 0.79
SREBF1-218ENST00000578469 PRDX5P30044 214 aa19.98■□□□□ 0.79
SREBF1-218ENST00000578469 COL9A3Q14050 684 aaPredicted RBP19.98■□□□□ 0.79
SREBF1-218ENST00000578469 GIMAP6Q6P9H5 292 aa19.98■□□□□ 0.79
SREBF1-218ENST00000578469 ADGRA1Q86SQ6 560 aa19.98■□□□□ 0.79
SREBF1-218ENST00000578469 FBXL16Q8N461 479 aa19.98■□□□□ 0.79
SREBF1-218ENST00000578469 BRF1Q92994 677 aa19.98■□□□□ 0.79
SREBF1-218ENST00000578469 NOL10Q9BSC4 688 aaKnown RBP19.98■□□□□ 0.79
SREBF1-218ENST00000578469 AGXT2Q9BYV1 514 aa19.98■□□□□ 0.79
SREBF1-218ENST00000578469 CRNKL1Q9BZJ0 848 aaKnown RBP19.98■□□□□ 0.79
SREBF1-218ENST00000578469 CNNM2Q9H8M5 875 aa19.98■□□□□ 0.79
SREBF1-218ENST00000578469 GJA3Q9Y6H8 435 aa19.98■□□□□ 0.79
SREBF1-218ENST00000578469 WDR33Q9C0J8 1336 aaKnown RBP19.98■□□□□ 0.79
SREBF1-218ENST00000578469 PRC1O43663 620 aa19.97■□□□□ 0.79
SREBF1-218ENST00000578469 MB21D2Q8IYB1 491 aaPredicted RBP19.97■□□□□ 0.79
SREBF1-218ENST00000578469 NECAB1Q8N987 351 aa19.97■□□□□ 0.79
SREBF1-218ENST00000578469 BEGAINQ9BUH8 593 aa19.97■□□□□ 0.79
SREBF1-218ENST00000578469 RNF41Q9H4P4 317 aaPredicted RBP19.97■□□□□ 0.79
SREBF1-218ENST00000578469 JAG2Q9Y219 1238 aa19.97■□□□□ 0.79
SREBF1-218ENST00000578469 G3V3G9 751 aa19.96■□□□□ 0.79
SREBF1-218ENST00000578469 GOLGA6L22H0YM25 854 aa19.96■□□□□ 0.79
SREBF1-218ENST00000578469 DYNLL1P63167 89 aaKnown RBP19.96■□□□□ 0.79
SREBF1-218ENST00000578469 DCAF8Q5TAQ9 597 aa19.96■□□□□ 0.79
SREBF1-218ENST00000578469 CLEC17AQ6ZS10 378 aa19.96■□□□□ 0.79
SREBF1-218ENST00000578469 PAXIP1Q6ZW49 1069 aaPredicted RBP19.96■□□□□ 0.79
SREBF1-218ENST00000578469 TBC1D10CQ8IV04 446 aa19.96■□□□□ 0.79
SREBF1-218ENST00000578469 SLF2Q8IX21 1173 aa19.96■□□□□ 0.79
SREBF1-218ENST00000578469 LRRC2Q9BYS8 371 aa19.96■□□□□ 0.79
SREBF1-218ENST00000578469 KRT23Q9C075 422 aa19.96■□□□□ 0.79
SREBF1-218ENST00000578469 LAMA4Q16363 1823 aa19.96■□□□□ 0.79
SREBF1-218ENST00000578469 RIMBP2O15034 1052 aa19.95■□□□□ 0.78
SREBF1-218ENST00000578469 BRD1O95696 1058 aa19.95■□□□□ 0.78
SREBF1-218ENST00000578469 BAG3O95817 575 aa19.95■□□□□ 0.78
SREBF1-218ENST00000578469 HSPA8P11142 646 aaKnown RBP19.95■□□□□ 0.78
SREBF1-218ENST00000578469 ECE1P42892 770 aa19.95■□□□□ 0.78
SREBF1-218ENST00000578469 AKNAD1Q5T1N1 836 aa19.95■□□□□ 0.78
SREBF1-218ENST00000578469 MFSD6Q6ZSS7 791 aa19.95■□□□□ 0.78
SREBF1-218ENST00000578469 CERS3Q8IU89 383 aa19.95■□□□□ 0.78
SREBF1-218ENST00000578469 LARGE2Q8N3Y3 721 aa19.95■□□□□ 0.78
SREBF1-218ENST00000578469 ZNF384Q8TF68 577 aa19.95■□□□□ 0.78
SREBF1-218ENST00000578469 ZNF274Q96GC6 653 aaPredicted RBP19.95■□□□□ 0.78
SREBF1-218ENST00000578469 LTBP1Q14766 1721 aa19.95■□□□□ 0.78
SREBF1-218ENST00000578469 FAM205AQ6ZU69 1335 aa19.95■□□□□ 0.78
SREBF1-218ENST00000578469 SNED1Q8TER0 1413 aa19.94■□□□□ 0.78
SREBF1-218ENST00000578469 PFKFB2O60825 505 aa19.94■□□□□ 0.78
SREBF1-218ENST00000578469 GJB2P29033 226 aa19.94■□□□□ 0.78
SREBF1-218ENST00000578469 STK3Q13188 491 aa19.94■□□□□ 0.78
SREBF1-218ENST00000578469 SDR42E1Q8WUS8 393 aa19.94■□□□□ 0.78
SREBF1-218ENST00000578469 GTF3C6Q969F1 213 aa19.94■□□□□ 0.78
SREBF1-218ENST00000578469 NBPF3Q9H094 633 aa19.94■□□□□ 0.78
SREBF1-218ENST00000578469 ATP8A2Q9NTI2 1148 aa19.94■□□□□ 0.78
SREBF1-218ENST00000578469 AATFQ9NY61 560 aaKnown RBP eCLIP19.94■□□□□ 0.78
SREBF1-218ENST00000578469 PDCP20941 246 aa19.93■□□□□ 0.78
SREBF1-218ENST00000578469 PPARAQ07869 468 aa19.93■□□□□ 0.78
SREBF1-218ENST00000578469 APOBRQ0VD83 1088 aa19.93■□□□□ 0.78
SREBF1-218ENST00000578469 CHST3Q7LGC8 479 aa19.93■□□□□ 0.78
SREBF1-218ENST00000578469 STAG1Q8WVM7 1258 aa19.93■□□□□ 0.78
SREBF1-218ENST00000578469 ABHD8Q96I13 439 aa19.93■□□□□ 0.78
SREBF1-218ENST00000578469 TMEM87BQ96K49 555 aa19.93■□□□□ 0.78
SREBF1-218ENST00000578469 LLPHQ9BRT6 129 aaKnown RBP19.93■□□□□ 0.78
SREBF1-218ENST00000578469 ANAPC4Q9UJX5 808 aa19.93■□□□□ 0.78
SREBF1-218ENST00000578469 THSD7BQ9C0I4 1608 aa19.92■□□□□ 0.78
SREBF1-218ENST00000578469 BAG4O95429 457 aaKnown RBP19.92■□□□□ 0.78
SREBF1-218ENST00000578469 EVCP57679 992 aa19.92■□□□□ 0.78
SREBF1-218ENST00000578469 CTDSPL2Q05D32 466 aa19.92■□□□□ 0.78
SREBF1-218ENST00000578469 ST3GAL1Q11201 340 aa19.92■□□□□ 0.78
SREBF1-218ENST00000578469 PKP1Q13835 747 aa19.92■□□□□ 0.78
SREBF1-218ENST00000578469 USP50Q70EL3 339 aaPredicted RBP19.92■□□□□ 0.78
SREBF1-218ENST00000578469 NIM1KQ8IY84 436 aa19.92■□□□□ 0.78
SREBF1-218ENST00000578469 NAP1L2Q9ULW6 460 aaPredicted RBP19.92■□□□□ 0.78
SREBF1-218ENST00000578469 SUGT1Q9Y2Z0 365 aa19.92■□□□□ 0.78
SREBF1-218ENST00000578469 MINDY4BA8MYZ0 360 aa19.91■□□□□ 0.78
SREBF1-218ENST00000578469 B4E1Z4 1266 aa19.91■□□□□ 0.78
SREBF1-218ENST00000578469 PCP11498 1178 aaKnown RBP19.91■□□□□ 0.78
SREBF1-218ENST00000578469 PPP4CP60510 307 aa19.91■□□□□ 0.78
SREBF1-218ENST00000578469 MFSD14BQ5SR56 506 aa19.91■□□□□ 0.78
SREBF1-218ENST00000578469 CAPNS2Q96L46 248 aa19.91■□□□□ 0.78
SREBF1-218ENST00000578469 ZDHHC9Q9Y397 364 aa19.91■□□□□ 0.78
SREBF1-218ENST00000578469 KIF3AQ9Y496 699 aa19.91■□□□□ 0.78
SREBF1-218ENST00000578469 STX6O43752 255 aa19.9■□□□□ 0.78
SREBF1-218ENST00000578469 SLC3A2P08195 630 aaKnown RBP19.9■□□□□ 0.78
SREBF1-218ENST00000578469 SCNN1DP51172 638 aa19.9■□□□□ 0.78
SREBF1-218ENST00000578469 ANTXR2P58335 489 aa19.9■□□□□ 0.78
SREBF1-218ENST00000578469 GTF2IP78347 998 aa19.9■□□□□ 0.78
SREBF1-218ENST00000578469 GRM1Q13255 1194 aa19.9■□□□□ 0.78
SREBF1-218ENST00000578469 SUPT20HQ8NEM7 779 aa19.9■□□□□ 0.78
SREBF1-218ENST00000578469 MTA3Q9BTC8 594 aa19.9■□□□□ 0.78
SREBF1-218ENST00000578469 TOMM22Q9NS69 142 aa19.9■□□□□ 0.78
SREBF1-218ENST00000578469 ANGEL1Q9UNK9 670 aaKnown RBP19.9■□□□□ 0.78
SREBF1-218ENST00000578469 MROH7-TTC4A0A0A0MT08 1334 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms