RNA–Protein interactions for RNA: ENST00000577840.5

CUEDC1-207, Transcript of CUE domain containing 1, humanhuman

TSL 5 BASIC

Gene CUEDC1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-207ENST00000577840 EPB41L4AQ9HCS5 686 aaPredicted RBP18.34■□□□□ 0.53
CUEDC1-207ENST00000577840 RBM19Q9Y4C8 960 aaKnown RBP18.34■□□□□ 0.53
CUEDC1-207ENST00000577840 SNX14Q9Y5W7 946 aa18.34■□□□□ 0.53
CUEDC1-207ENST00000577840 ADAMTSL1Q8N6G6 1762 aa18.34■□□□□ 0.53
CUEDC1-207ENST00000577840 ECM29Q5VYK3 1845 aa18.33■□□□□ 0.53
CUEDC1-207ENST00000577840 SPDYE2BA6NHP3 402 aa18.33■□□□□ 0.52
CUEDC1-207ENST00000577840 SLC3A2P08195 630 aaKnown RBP18.33■□□□□ 0.52
CUEDC1-207ENST00000577840 CYP21A2P08686 494 aa18.33■□□□□ 0.52
CUEDC1-207ENST00000577840 SPDYE6P0CI01 402 aa18.33■□□□□ 0.52
CUEDC1-207ENST00000577840 ANP32AP39687 249 aaKnown RBP18.33■□□□□ 0.52
CUEDC1-207ENST00000577840 MAPKAPK5Q8IW41 473 aa18.33■□□□□ 0.52
CUEDC1-207ENST00000577840 MCM9Q9NXL9 1143 aa18.33■□□□□ 0.52
CUEDC1-207ENST00000577840 NAV1Q8NEY1 1877 aa18.33■□□□□ 0.52
CUEDC1-207ENST00000577840 BAZ2AQ9UIF9 1905 aaKnown RBP18.32■□□□□ 0.52
CUEDC1-207ENST00000577840 MINDY4BA8MYZ0 360 aa18.32■□□□□ 0.52
CUEDC1-207ENST00000577840 DDNO94850 711 aaPredicted RBP18.32■□□□□ 0.52
CUEDC1-207ENST00000577840 POLR3DP05423 398 aaPredicted RBP18.32■□□□□ 0.52
CUEDC1-207ENST00000577840 HAND2P61296 217 aa18.32■□□□□ 0.52
CUEDC1-207ENST00000577840 PICALMQ13492 652 aa18.32■□□□□ 0.52
CUEDC1-207ENST00000577840 RABEP1Q15276 862 aa18.32■□□□□ 0.52
CUEDC1-207ENST00000577840 TSGA10IPQ3SY00 556 aa18.32■□□□□ 0.52
CUEDC1-207ENST00000577840 PRMT6Q96LA8 375 aaPredicted RBP18.32■□□□□ 0.52
CUEDC1-207ENST00000577840 TDRD3Q9H7E2 651 aaKnown RBP18.32■□□□□ 0.52
CUEDC1-207ENST00000577840 GPRC5DQ9NZD1 345 aa18.32■□□□□ 0.52
CUEDC1-207ENST00000577840 PALD1Q9ULE6 856 aa18.32■□□□□ 0.52
CUEDC1-207ENST00000577840 CDK5RAP2Q96SN8 1893 aa18.31■□□□□ 0.52
CUEDC1-207ENST00000577840 FLT1P17948 1338 aa18.31■□□□□ 0.52
CUEDC1-207ENST00000577840 LAMA4Q16363 1823 aa18.31■□□□□ 0.52
CUEDC1-207ENST00000577840 FOCADQ5VW36 1801 aa18.31■□□□□ 0.52
CUEDC1-207ENST00000577840 USP17L12C9JPN9 530 aa18.31■□□□□ 0.52
CUEDC1-207ENST00000577840 USP17L21D6R901 530 aa18.31■□□□□ 0.52
CUEDC1-207ENST00000577840 PPARAQ07869 468 aa18.31■□□□□ 0.52
CUEDC1-207ENST00000577840 TRDNQ13061 729 aa18.31■□□□□ 0.52
CUEDC1-207ENST00000577840 SBK1Q52WX2 424 aa18.31■□□□□ 0.52
CUEDC1-207ENST00000577840 RBM26Q5T8P6 1007 aaKnown RBP18.31■□□□□ 0.52
CUEDC1-207ENST00000577840 RASEFQ8IZ41 740 aa18.31■□□□□ 0.52
CUEDC1-207ENST00000577840 IL27Q8NEV9 243 aa18.31■□□□□ 0.52
CUEDC1-207ENST00000577840 IDI2Q9BXS1 227 aa18.31■□□□□ 0.52
CUEDC1-207ENST00000577840 RNF41Q9H4P4 317 aaPredicted RBP18.31■□□□□ 0.52
CUEDC1-207ENST00000577840 PCDHAC2Q9Y5I4 1007 aa18.31■□□□□ 0.52
CUEDC1-207ENST00000577840 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
CUEDC1-207ENST00000577840 WDHD1O75717 1129 aaPredicted RBP18.3■□□□□ 0.52
CUEDC1-207ENST00000577840 KIF4BQ2VIQ3 1234 aa18.3■□□□□ 0.52
CUEDC1-207ENST00000577840 CTR9Q6PD62 1173 aa18.3■□□□□ 0.52
CUEDC1-207ENST00000577840 IL17RAQ96F46 866 aa18.3■□□□□ 0.52
CUEDC1-207ENST00000577840 JAKMIP1Q96N16 626 aaKnown RBP18.3■□□□□ 0.52
CUEDC1-207ENST00000577840 ZNF70Q9UC06 446 aaPredicted RBP18.3■□□□□ 0.52
CUEDC1-207ENST00000577840 MYH1P12882 1939 aa18.29■□□□□ 0.52
CUEDC1-207ENST00000577840 FOXN1O15353 648 aa18.29■□□□□ 0.52
CUEDC1-207ENST00000577840 HMGB1P09429 215 aaKnown RBP18.29■□□□□ 0.52
CUEDC1-207ENST00000577840 SPDYE2Q495Y8 402 aa18.29■□□□□ 0.52
CUEDC1-207ENST00000577840 RALYLQ86SE5 291 aaKnown RBP18.29■□□□□ 0.52
CUEDC1-207ENST00000577840 TTC6Q86TZ1 520 aa18.29■□□□□ 0.52
CUEDC1-207ENST00000577840 NEK1Q96PY6 1258 aa18.29■□□□□ 0.52
CUEDC1-207ENST00000577840 TM6SF1Q9BZW5 370 aa18.29■□□□□ 0.52
CUEDC1-207ENST00000577840 MKRN1Q9UHC7 482 aaKnown RBP18.29■□□□□ 0.52
CUEDC1-207ENST00000577840 SAP30BPQ9UHR5 308 aaKnown RBP18.29■□□□□ 0.52
CUEDC1-207ENST00000577840 LAMB1P07942 1786 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 SHTN1A0MZ66 631 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 CLRN2A0PK11 232 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 GLTPD2A6NH11 291 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 E7EWF7 191 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 WNT10BO00744 389 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 ENTPD3O75355 529 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 HLA-DOAP06340 250 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 PCP11498 1178 aaKnown RBP18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 TNNI2P48788 182 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 TBC1D10BQ4KMP7 808 aaPredicted RBP18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 AKNAD1Q5T1N1 836 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 BLOC1S2Q6QNY1 142 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 MFSD6Q6ZSS7 791 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 SAMD7Q7Z3H4 446 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 NCOA7Q8NI08 942 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 ZBED3Q96IU2 234 aaPredicted RBP18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 OSBPL5Q9H0X9 879 aaPredicted RBP18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 DHX36Q9H2U1 1008 aaKnown RBP18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 CNNM2Q9H8M5 875 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 VEZTQ9HBM0 779 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 ZNF287Q9HBT7 754 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 ANAPC4Q9UJX5 808 aa18.28■□□□□ 0.52
CUEDC1-207ENST00000577840 ST18O60284 1047 aa18.27■□□□□ 0.52
CUEDC1-207ENST00000577840 VEGFAP15692 232 aaPredicted RBP18.27■□□□□ 0.52
CUEDC1-207ENST00000577840 CASTP20810 708 aaKnown RBP18.27■□□□□ 0.52
CUEDC1-207ENST00000577840 CACNB3P54284 484 aa18.27■□□□□ 0.52
CUEDC1-207ENST00000577840 CTDSPL2Q05D32 466 aa18.27■□□□□ 0.52
CUEDC1-207ENST00000577840 PDE4BQ07343 736 aa18.27■□□□□ 0.52
CUEDC1-207ENST00000577840 TNFAIP1Q13829 316 aa18.27■□□□□ 0.52
CUEDC1-207ENST00000577840 C12orf60Q5U649 245 aa18.27■□□□□ 0.52
CUEDC1-207ENST00000577840 STAG1Q8WVM7 1258 aa18.27■□□□□ 0.52
CUEDC1-207ENST00000577840 KIF2CQ99661 725 aa18.27■□□□□ 0.52
CUEDC1-207ENST00000577840 KRT23Q9C075 422 aa18.27■□□□□ 0.52
CUEDC1-207ENST00000577840 DDX4Q9NQI0 724 aaKnown RBP18.27■□□□□ 0.52
CUEDC1-207ENST00000577840 TOMM22Q9NS69 142 aa18.27■□□□□ 0.52
CUEDC1-207ENST00000577840 CYP46A1Q9Y6A2 500 aa18.27■□□□□ 0.52
CUEDC1-207ENST00000577840 TCP10L2B9ZVM9 353 aa18.26■□□□□ 0.51
CUEDC1-207ENST00000577840 EPS15P42566 896 aa18.26■□□□□ 0.51
CUEDC1-207ENST00000577840 NEK4P51957 841 aa18.26■□□□□ 0.51
CUEDC1-207ENST00000577840 TCP10Q12799 353 aa18.26■□□□□ 0.51
CUEDC1-207ENST00000577840 NFIAQ12857 509 aa18.26■□□□□ 0.51
CUEDC1-207ENST00000577840 NBPF9Q3BBW0 867 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms