RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 ARID4AP29374 1257 aaPredicted RBP19.43■□□□□ 0.7
CMTM3-213ENST00000566756 NDUFA8P51970 172 aa19.43■□□□□ 0.7
CMTM3-213ENST00000566756 KIF23Q02241 960 aaPredicted RBP19.43■□□□□ 0.7
CMTM3-213ENST00000566756 C3orf67Q6ZVT6 689 aa19.43■□□□□ 0.7
CMTM3-213ENST00000566756 ANKRD18AQ8IVF6 992 aa19.43■□□□□ 0.7
CMTM3-213ENST00000566756 PROM2Q8N271 834 aa19.43■□□□□ 0.7
CMTM3-213ENST00000566756 GPHNQ9NQX3 736 aaPredicted RBP19.43■□□□□ 0.7
CMTM3-213ENST00000566756 ANGEL1Q9UNK9 670 aaKnown RBP19.43■□□□□ 0.7
CMTM3-213ENST00000566756 CLIC4Q9Y696 253 aa19.43■□□□□ 0.7
CMTM3-213ENST00000566756 COL4A1P02462 1669 aa19.42■□□□□ 0.7
CMTM3-213ENST00000566756 NEDD4P46934 1319 aa19.42■□□□□ 0.7
CMTM3-213ENST00000566756 MCAMP43121 646 aa19.42■□□□□ 0.7
CMTM3-213ENST00000566756 ANO1Q5XXA6 986 aa19.42■□□□□ 0.7
CMTM3-213ENST00000566756 TMEM87BQ96K49 555 aa19.42■□□□□ 0.7
CMTM3-213ENST00000566756 NFIXQ14938 502 aa19.41■□□□□ 0.7
CMTM3-213ENST00000566756 ZRSR1Q15695 479 aaKnown RBP19.41■□□□□ 0.7
CMTM3-213ENST00000566756 ALX1Q15699 326 aa19.41■□□□□ 0.7
CMTM3-213ENST00000566756 TPD52L1Q16890 204 aaPredicted RBP19.41■□□□□ 0.7
CMTM3-213ENST00000566756 CCDC102BQ68D86 513 aa19.41■□□□□ 0.7
CMTM3-213ENST00000566756 AOPEPQ8N6M6 819 aa19.41■□□□□ 0.7
CMTM3-213ENST00000566756 C16orf45Q96MC5 204 aaPredicted RBP19.41■□□□□ 0.7
CMTM3-213ENST00000566756 RGPD3A6NKT7 1758 aaPredicted RBP19.41■□□□□ 0.7
CMTM3-213ENST00000566756 RGPD4Q7Z3J3 1758 aa19.41■□□□□ 0.7
CMTM3-213ENST00000566756 EP400Q96L91 3159 aa19.41■□□□□ 0.7
CMTM3-213ENST00000566756 A0A1B0GVL5 298 aa19.41■□□□□ 0.7
CMTM3-213ENST00000566756 CHRNDQ07001 517 aa19.41■□□□□ 0.7
CMTM3-213ENST00000566756 SLC39A14Q15043 492 aa19.41■□□□□ 0.7
CMTM3-213ENST00000566756 AXDND1Q5T1B0 1012 aaPredicted RBP19.41■□□□□ 0.7
CMTM3-213ENST00000566756 CPLX2Q6PUV4 134 aaKnown RBP19.41■□□□□ 0.7
CMTM3-213ENST00000566756 HELBQ8NG08 1087 aaPredicted RBP19.41■□□□□ 0.7
CMTM3-213ENST00000566756 TSC1Q92574 1164 aa19.41■□□□□ 0.7
CMTM3-213ENST00000566756 FAM237AA0A1B0GTK4 181 aa19.4■□□□□ 0.7
CMTM3-213ENST00000566756 KIF2AO00139 706 aaPredicted RBP19.4■□□□□ 0.7
CMTM3-213ENST00000566756 SH2B2O14492 632 aaPredicted RBP19.4■□□□□ 0.7
CMTM3-213ENST00000566756 PPP6R2O75170 966 aa19.4■□□□□ 0.7
CMTM3-213ENST00000566756 GYS1P13807 737 aa19.4■□□□□ 0.7
CMTM3-213ENST00000566756 KCNJ6P48051 423 aa19.4■□□□□ 0.7
CMTM3-213ENST00000566756 NLRP12P59046 1061 aa19.4■□□□□ 0.7
CMTM3-213ENST00000566756 TPM4P67936 248 aa19.4■□□□□ 0.7
CMTM3-213ENST00000566756 ZMYND15Q9H091 742 aa19.4■□□□□ 0.7
CMTM3-213ENST00000566756 SLC3A2P08195 630 aaKnown RBP19.39■□□□□ 0.7
CMTM3-213ENST00000566756 CCZ1BP86790 482 aa19.39■□□□□ 0.7
CMTM3-213ENST00000566756 CCZ1P86791 482 aaPredicted RBP19.39■□□□□ 0.7
CMTM3-213ENST00000566756 NYAP1Q6ZVC0 841 aa19.39■□□□□ 0.7
CMTM3-213ENST00000566756 PDCL2Q8N4E4 241 aa19.39■□□□□ 0.7
CMTM3-213ENST00000566756 JMYQ8N9B5 988 aa19.39■□□□□ 0.7
CMTM3-213ENST00000566756 NBPF3Q9H094 633 aa19.39■□□□□ 0.7
CMTM3-213ENST00000566756 CCDC69A6NI79 296 aa19.39■□□□□ 0.69
CMTM3-213ENST00000566756 ZNF202O95125 648 aa19.39■□□□□ 0.69
CMTM3-213ENST00000566756 POLR3DP05423 398 aaPredicted RBP19.39■□□□□ 0.69
CMTM3-213ENST00000566756 SKILP12757 684 aa19.39■□□□□ 0.69
CMTM3-213ENST00000566756 TNS1Q9HBL0 1735 aaKnown RBP19.38■□□□□ 0.69
CMTM3-213ENST00000566756 DOCK2Q92608 1830 aa19.38■□□□□ 0.69
CMTM3-213ENST00000566756 IKBKBO14920 756 aa19.38■□□□□ 0.69
CMTM3-213ENST00000566756 PHKA1P46020 1223 aa19.38■□□□□ 0.69
CMTM3-213ENST00000566756 SLC9C2Q5TAH2 1124 aa19.38■□□□□ 0.69
CMTM3-213ENST00000566756 CEP135Q66GS9 1140 aa19.38■□□□□ 0.69
CMTM3-213ENST00000566756 OTUD7BQ6GQQ9 843 aa19.38■□□□□ 0.69
CMTM3-213ENST00000566756 SGMS1Q86VZ5 419 aa19.38■□□□□ 0.69
CMTM3-213ENST00000566756 CCDC112Q8NEF3 446 aa19.38■□□□□ 0.69
CMTM3-213ENST00000566756 MYO5AQ9Y4I1 1855 aaKnown RBP19.38■□□□□ 0.69
CMTM3-213ENST00000566756 TNRC6CQ9HCJ0 1690 aaKnown RBP19.38■□□□□ 0.69
CMTM3-213ENST00000566756 KIF28PB7ZC32 967 aa19.37■□□□□ 0.69
CMTM3-213ENST00000566756 TM4SF1P30408 202 aa19.37■□□□□ 0.69
CMTM3-213ENST00000566756 METAP2P50579 478 aaKnown RBP eCLIP19.37■□□□□ 0.69
CMTM3-213ENST00000566756 RPS8P62241 208 aaKnown RBP19.37■□□□□ 0.69
CMTM3-213ENST00000566756 UBE4AQ14139 1066 aa19.37■□□□□ 0.69
CMTM3-213ENST00000566756 CCDC150Q8NCX0 1101 aa19.37■□□□□ 0.69
CMTM3-213ENST00000566756 NID2Q14112 1375 aa19.37■□□□□ 0.69
CMTM3-213ENST00000566756 STK36Q9NRP7 1315 aa19.37■□□□□ 0.69
CMTM3-213ENST00000566756 PI16Q6UXB8 463 aa19.37■□□□□ 0.69
CMTM3-213ENST00000566756 CELF1Q92879 486 aaKnown RBP19.37■□□□□ 0.69
CMTM3-213ENST00000566756 HPSEQ9Y251 543 aa19.37■□□□□ 0.69
CMTM3-213ENST00000566756 MYO1BO43795 1136 aa19.36■□□□□ 0.69
CMTM3-213ENST00000566756 APBA3O96018 575 aa19.36■□□□□ 0.69
CMTM3-213ENST00000566756 TUBB4AP04350 444 aa19.36■□□□□ 0.69
CMTM3-213ENST00000566756 PFKFB1P16118 471 aa19.36■□□□□ 0.69
CMTM3-213ENST00000566756 PTPN14Q15678 1187 aa19.36■□□□□ 0.69
CMTM3-213ENST00000566756 DPCR1Q3MIW9 517 aa19.36■□□□□ 0.69
CMTM3-213ENST00000566756 APOA5Q6Q788 366 aa19.36■□□□□ 0.69
CMTM3-213ENST00000566756 NBPF11Q86T75 865 aa19.36■□□□□ 0.69
CMTM3-213ENST00000566756 TBC1D10CQ8IV04 446 aa19.36■□□□□ 0.69
CMTM3-213ENST00000566756 ELOA2Q8IYF1 753 aaPredicted RBP19.36■□□□□ 0.69
CMTM3-213ENST00000566756 CNBD1Q8NA66 436 aa19.36■□□□□ 0.69
CMTM3-213ENST00000566756 ALG1Q9BT22 464 aa19.36■□□□□ 0.69
CMTM3-213ENST00000566756 RGS17Q9UGC6 210 aaPredicted RBP19.36■□□□□ 0.69
CMTM3-213ENST00000566756 TUBE1Q9UJT0 475 aa19.36■□□□□ 0.69
CMTM3-213ENST00000566756 MINPP1Q9UNW1 487 aa19.36■□□□□ 0.69
CMTM3-213ENST00000566756 TIAM2Q8IVF5 1701 aa19.36■□□□□ 0.69
CMTM3-213ENST00000566756 TCRBV5S4A2TA0A5A2 114 aa19.35■□□□□ 0.69
CMTM3-213ENST00000566756 PPFIA3O75145 1194 aa19.35■□□□□ 0.69
CMTM3-213ENST00000566756 LIFRP42702 1097 aa19.35■□□□□ 0.69
CMTM3-213ENST00000566756 PIH1D3Q9NQM4 214 aaKnown RBP19.35■□□□□ 0.69
CMTM3-213ENST00000566756 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.35■□□□□ 0.69
CMTM3-213ENST00000566756 PDE6AP16499 860 aa19.35■□□□□ 0.69
CMTM3-213ENST00000566756 U2AF2P26368 475 aaKnown RBP eCLIP19.35■□□□□ 0.69
CMTM3-213ENST00000566756 NCBP1Q09161 790 aaKnown RBP19.35■□□□□ 0.69
CMTM3-213ENST00000566756 PPP4R3BQ5MIZ7 849 aa19.35■□□□□ 0.69
CMTM3-213ENST00000566756 CYB5R4Q7L1T6 521 aa19.35■□□□□ 0.69
CMTM3-213ENST00000566756 CCAR2Q8N163 923 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms