RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 TEX11Q8IYF3 940 aa18.39■□□□□ 0.53
PDXDC1-209ENST00000563667 TRPM4Q8TD43 1214 aa18.39■□□□□ 0.53
PDXDC1-209ENST00000563667 USP40Q9NVE5 1235 aa18.39■□□□□ 0.53
PDXDC1-209ENST00000563667 ADAMTSL1Q8N6G6 1762 aa18.38■□□□□ 0.53
PDXDC1-209ENST00000563667 TMEM88BA6NKF7 163 aa18.38■□□□□ 0.53
PDXDC1-209ENST00000563667 TBC1D10BQ4KMP7 808 aaPredicted RBP18.38■□□□□ 0.53
PDXDC1-209ENST00000563667 SAMD7Q7Z3H4 446 aa18.38■□□□□ 0.53
PDXDC1-209ENST00000563667 OGFOD1Q8N543 542 aa18.38■□□□□ 0.53
PDXDC1-209ENST00000563667 AGBL3Q8NEM8 1001 aa18.38■□□□□ 0.53
PDXDC1-209ENST00000563667 TGFBRAP1Q8WUH2 860 aa18.38■□□□□ 0.53
PDXDC1-209ENST00000563667 MRIQ9BWK5 157 aa18.38■□□□□ 0.53
PDXDC1-209ENST00000563667 ATP8A2Q9NTI2 1148 aa18.38■□□□□ 0.53
PDXDC1-209ENST00000563667 SERPINA10Q9UK55 444 aa18.38■□□□□ 0.53
PDXDC1-209ENST00000563667 TAF6LQ9Y6J9 622 aa18.38■□□□□ 0.53
PDXDC1-209ENST00000563667 MINDY4BA8MYZ0 360 aa18.37■□□□□ 0.53
PDXDC1-209ENST00000563667 USP17L8P0C7I0 530 aa18.37■□□□□ 0.53
PDXDC1-209ENST00000563667 PSMA5P28066 241 aa18.37■□□□□ 0.53
PDXDC1-209ENST00000563667 NEK4P51957 841 aa18.37■□□□□ 0.53
PDXDC1-209ENST00000563667 ADCK5Q3MIX3 580 aa18.37■□□□□ 0.53
PDXDC1-209ENST00000563667 CFAP100Q494V2 611 aa18.37■□□□□ 0.53
PDXDC1-209ENST00000563667 GIMAP6Q6P9H5 292 aa18.37■□□□□ 0.53
PDXDC1-209ENST00000563667 ZDHHC15Q96MV8 337 aa18.37■□□□□ 0.53
PDXDC1-209ENST00000563667 GMLQ99445 158 aa18.37■□□□□ 0.53
PDXDC1-209ENST00000563667 ZMYM6O95789 1325 aa18.37■□□□□ 0.53
PDXDC1-209ENST00000563667 ZNF646O15015 1829 aaPredicted RBP18.37■□□□□ 0.53
PDXDC1-209ENST00000563667 PSME4Q14997 1843 aa18.37■□□□□ 0.53
PDXDC1-209ENST00000563667 CASTP20810 708 aaKnown RBP18.36■□□□□ 0.53
PDXDC1-209ENST00000563667 HIRAP54198 1017 aaPredicted RBP18.36■□□□□ 0.53
PDXDC1-209ENST00000563667 RHBDL3P58872 404 aa18.36■□□□□ 0.53
PDXDC1-209ENST00000563667 TSGA10IPQ3SY00 556 aa18.36■□□□□ 0.53
PDXDC1-209ENST00000563667 MAPKAPK5Q8IW41 473 aa18.36■□□□□ 0.53
PDXDC1-209ENST00000563667 IL17RAQ96F46 866 aa18.36■□□□□ 0.53
PDXDC1-209ENST00000563667 UPF3BQ9BZI7 483 aaKnown RBP18.36■□□□□ 0.53
PDXDC1-209ENST00000563667 DCP1AQ9NPI6 582 aaPredicted RBP18.36■□□□□ 0.53
PDXDC1-209ENST00000563667 MKRN1Q9UHC7 482 aaKnown RBP18.36■□□□□ 0.53
PDXDC1-209ENST00000563667 PCDHAC2Q9Y5I4 1007 aa18.36■□□□□ 0.53
PDXDC1-209ENST00000563667 E7EWF7 191 aa18.35■□□□□ 0.53
PDXDC1-209ENST00000563667 TRAF5O00463 557 aa18.35■□□□□ 0.53
PDXDC1-209ENST00000563667 ST18O60284 1047 aa18.35■□□□□ 0.53
PDXDC1-209ENST00000563667 CTDSPL2Q05D32 466 aa18.35■□□□□ 0.53
PDXDC1-209ENST00000563667 BECN1Q14457 450 aa18.35■□□□□ 0.53
PDXDC1-209ENST00000563667 DLGAP5Q15398 846 aa18.35■□□□□ 0.53
PDXDC1-209ENST00000563667 KIF4BQ2VIQ3 1234 aa18.35■□□□□ 0.53
PDXDC1-209ENST00000563667 APOBEC3HQ6NTF7 200 aaKnown RBP18.35■□□□□ 0.53
PDXDC1-209ENST00000563667 CDC42EP5Q6NZY7 148 aa18.35■□□□□ 0.53
PDXDC1-209ENST00000563667 ZC3H15Q8WU90 426 aaKnown RBP18.35■□□□□ 0.53
PDXDC1-209ENST00000563667 NEK1Q96PY6 1258 aa18.35■□□□□ 0.53
PDXDC1-209ENST00000563667 TM6SF1Q9BZW5 370 aa18.35■□□□□ 0.53
PDXDC1-209ENST00000563667 MCM9Q9NXL9 1143 aa18.35■□□□□ 0.53
PDXDC1-209ENST00000563667 DAXXQ9UER7 740 aaPredicted RBP18.35■□□□□ 0.53
PDXDC1-209ENST00000563667 CYP46A1Q9Y6A2 500 aa18.35■□□□□ 0.53
PDXDC1-209ENST00000563667 USP17L12C9JPN9 530 aa18.34■□□□□ 0.53
PDXDC1-209ENST00000563667 USP17L21D6R901 530 aa18.34■□□□□ 0.53
PDXDC1-209ENST00000563667 CPA1P15085 419 aa18.34■□□□□ 0.53
PDXDC1-209ENST00000563667 FMR1Q06787 632 aaKnown RBP eCLIP18.34■□□□□ 0.53
PDXDC1-209ENST00000563667 PPARAQ07869 468 aa18.34■□□□□ 0.53
PDXDC1-209ENST00000563667 CTR9Q6PD62 1173 aa18.34■□□□□ 0.53
PDXDC1-209ENST00000563667 BLOC1S2Q6QNY1 142 aa18.34■□□□□ 0.53
PDXDC1-209ENST00000563667 STOX1Q6ZVD7 989 aa18.34■□□□□ 0.53
PDXDC1-209ENST00000563667 HSCBQ8IWL3 235 aa18.34■□□□□ 0.53
PDXDC1-209ENST00000563667 AMOTL1Q8IY63 956 aa18.34■□□□□ 0.53
PDXDC1-209ENST00000563667 STK11IPQ8N1F8 1099 aa18.34■□□□□ 0.53
PDXDC1-209ENST00000563667 GLIS2Q9BZE0 524 aaPredicted RBP18.34■□□□□ 0.53
PDXDC1-209ENST00000563667 SAP30BPQ9UHR5 308 aaKnown RBP18.34■□□□□ 0.53
PDXDC1-209ENST00000563667 ABT1Q9ULW3 272 aaKnown RBP18.34■□□□□ 0.53
PDXDC1-209ENST00000563667 CYP2D7A0A087X1C5 515 aa18.33■□□□□ 0.52
PDXDC1-209ENST00000563667 POLR3DP05423 398 aaPredicted RBP18.33■□□□□ 0.52
PDXDC1-209ENST00000563667 PICALMQ13492 652 aa18.33■□□□□ 0.52
PDXDC1-209ENST00000563667 TBC1D10CQ8IV04 446 aa18.33■□□□□ 0.52
PDXDC1-209ENST00000563667 DCPSQ96C86 337 aaKnown RBP18.33■□□□□ 0.52
PDXDC1-209ENST00000563667 ZSWIM6Q9HCJ5 1215 aa18.33■□□□□ 0.52
PDXDC1-209ENST00000563667 ARPP21Q9UBL0 812 aaPredicted RBP18.33■□□□□ 0.52
PDXDC1-209ENST00000563667 EGFRP00533 1210 aa18.32■□□□□ 0.52
PDXDC1-209ENST00000563667 CYP2D6P10635 497 aa18.32■□□□□ 0.52
PDXDC1-209ENST00000563667 TRDNQ13061 729 aa18.32■□□□□ 0.52
PDXDC1-209ENST00000563667 SLC4A8Q2Y0W8 1093 aa18.32■□□□□ 0.52
PDXDC1-209ENST00000563667 RUFY3Q7L099 469 aa18.32■□□□□ 0.52
PDXDC1-209ENST00000563667 CDC37L1Q7L3B6 337 aa18.32■□□□□ 0.52
PDXDC1-209ENST00000563667 RALYLQ86SE5 291 aaKnown RBP18.32■□□□□ 0.52
PDXDC1-209ENST00000563667 PRMT6Q96LA8 375 aaPredicted RBP18.32■□□□□ 0.52
PDXDC1-209ENST00000563667 IPO9Q96P70 1041 aaKnown RBP18.32■□□□□ 0.52
PDXDC1-209ENST00000563667 TDRD3Q9H7E2 651 aaKnown RBP18.32■□□□□ 0.52
PDXDC1-209ENST00000563667 ZNF408Q9H9D4 720 aa18.32■□□□□ 0.52
PDXDC1-209ENST00000563667 TOMM22Q9NS69 142 aa18.32■□□□□ 0.52
PDXDC1-209ENST00000563667 PDRG1Q9NUG6 133 aa18.32■□□□□ 0.52
PDXDC1-209ENST00000563667 PGAP2Q9UHJ9 254 aa18.32■□□□□ 0.52
PDXDC1-209ENST00000563667 FLT1P17948 1338 aa18.31■□□□□ 0.52
PDXDC1-209ENST00000563667 SLC3A2P08195 630 aaKnown RBP18.31■□□□□ 0.52
PDXDC1-209ENST00000563667 HMGB1P09429 215 aaKnown RBP18.31■□□□□ 0.52
PDXDC1-209ENST00000563667 SBK1Q52WX2 424 aa18.31■□□□□ 0.52
PDXDC1-209ENST00000563667 AKNAD1Q5T1N1 836 aa18.31■□□□□ 0.52
PDXDC1-209ENST00000563667 MFSD6Q6ZSS7 791 aa18.31■□□□□ 0.52
PDXDC1-209ENST00000563667 USP48Q86UV5 1035 aa18.31■□□□□ 0.52
PDXDC1-209ENST00000563667 JMYQ8N9B5 988 aa18.31■□□□□ 0.52
PDXDC1-209ENST00000563667 NCOA7Q8NI08 942 aa18.31■□□□□ 0.52
PDXDC1-209ENST00000563667 SNX21Q969T3 373 aa18.31■□□□□ 0.52
PDXDC1-209ENST00000563667 NBPF3Q9H094 633 aa18.31■□□□□ 0.52
PDXDC1-209ENST00000563667 TMOD2Q9NZR1 351 aa18.31■□□□□ 0.52
PDXDC1-209ENST00000563667 SPDYE2BA6NHP3 402 aa18.3■□□□□ 0.52
PDXDC1-209ENST00000563667 WDHD1O75717 1129 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms