RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 LGR6Q9HBX8 967 aa6.51□□□□□ -1.37
ATXN3-227ENST00000554491 RAD18Q9NS91 495 aa6.51□□□□□ -1.37
ATXN3-227ENST00000554491 ZC3H7BQ9UGR2 993 aaKnown RBP6.51□□□□□ -1.37
ATXN3-227ENST00000554491 BRPF3Q9ULD4 1205 aa6.51□□□□□ -1.37
ATXN3-227ENST00000554491 KDM5BQ9UGL1 1544 aa6.5□□□□□ -1.37
ATXN3-227ENST00000554491 ASPAP45381 313 aa6.5□□□□□ -1.37
ATXN3-227ENST00000554491 ARHGAP4P98171 946 aa6.5□□□□□ -1.37
ATXN3-227ENST00000554491 MAP7Q14244 749 aa6.5□□□□□ -1.37
ATXN3-227ENST00000554491 FBXL18Q96ME1 805 aa6.5□□□□□ -1.37
ATXN3-227ENST00000554491 ANP32EQ9BTT0 268 aa6.5□□□□□ -1.37
ATXN3-227ENST00000554491 EHD4Q9H223 541 aa6.5□□□□□ -1.37
ATXN3-227ENST00000554491 NPHS2Q9NP85 383 aa6.5□□□□□ -1.37
ATXN3-227ENST00000554491 PAK6Q9NQU5 681 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-227ENST00000554491 C1GALT1Q9NS00 363 aa6.5□□□□□ -1.37
ATXN3-227ENST00000554491 EGFL7Q9UHF1 273 aa6.5□□□□□ -1.37
ATXN3-227ENST00000554491 MAGI3Q5TCQ9 1506 aa6.5□□□□□ -1.37
ATXN3-227ENST00000554491 PTPRGP23470 1445 aa6.5□□□□□ -1.37
ATXN3-227ENST00000554491 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-227ENST00000554491 AOC2O75106 756 aa6.49□□□□□ -1.37
ATXN3-227ENST00000554491 ITPKAP23677 461 aa6.49□□□□□ -1.37
ATXN3-227ENST00000554491 DUSP27Q5VZP5 1158 aa6.49□□□□□ -1.37
ATXN3-227ENST00000554491 SEZ6L2Q6UXD5 910 aa6.49□□□□□ -1.37
ATXN3-227ENST00000554491 GLYCTKQ8IVS8 523 aa6.49□□□□□ -1.37
ATXN3-227ENST00000554491 FLCNQ8NFG4 579 aa6.49□□□□□ -1.37
ATXN3-227ENST00000554491 WDR18Q9BV38 432 aa6.49□□□□□ -1.37
ATXN3-227ENST00000554491 GSX1Q9H4S2 264 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-227ENST00000554491 PPP1R9AQ9ULJ8 1098 aa6.49□□□□□ -1.37
ATXN3-227ENST00000554491 DAGLAQ9Y4D2 1042 aa6.49□□□□□ -1.37
ATXN3-227ENST00000554491 WDR7Q9Y4E6 1490 aa6.48□□□□□ -1.37
ATXN3-227ENST00000554491 PDE3AQ14432 1141 aa6.48□□□□□ -1.37
ATXN3-227ENST00000554491 HP1BP3Q5SSJ5 553 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-227ENST00000554491 ABCB6Q9NP58 842 aa6.48□□□□□ -1.37
ATXN3-227ENST00000554491 PREX1Q8TCU6 1659 aa6.47□□□□□ -1.37
ATXN3-227ENST00000554491 CPNE3O75131 537 aaKnown RBP6.47□□□□□ -1.37
ATXN3-227ENST00000554491 ZNF157P51786 506 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-227ENST00000554491 OGFOD2Q6N063 350 aa6.47□□□□□ -1.37
ATXN3-227ENST00000554491 WDR89Q96FK6 387 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-227ENST00000554491 TNIKQ9UKE5 1360 aa6.46□□□□□ -1.37
ATXN3-227ENST00000554491 ARHGEF40Q8TER5 1519 aa6.46□□□□□ -1.37
ATXN3-227ENST00000554491 NDUFB5O43674 189 aa6.46□□□□□ -1.38
ATXN3-227ENST00000554491 ITGB5P18084 799 aa6.46□□□□□ -1.38
ATXN3-227ENST00000554491 LIG1P18858 919 aa6.46□□□□□ -1.38
ATXN3-227ENST00000554491 CYP27A1Q02318 531 aa6.46□□□□□ -1.38
ATXN3-227ENST00000554491 FAAP100Q0VG06 881 aa6.46□□□□□ -1.38
ATXN3-227ENST00000554491 OGFOD3Q6PK18 319 aa6.46□□□□□ -1.38
ATXN3-227ENST00000554491 ZNF574Q6ZN55 896 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-227ENST00000554491 WFDC3Q8IUB2 231 aa6.46□□□□□ -1.38
ATXN3-227ENST00000554491 DDX54Q8TDD1 881 aaKnown RBP6.46□□□□□ -1.38
ATXN3-227ENST00000554491 FAM129BQ96TA1 746 aa6.46□□□□□ -1.38
ATXN3-227ENST00000554491 UACAQ9BZF9 1416 aa6.46□□□□□ -1.38
ATXN3-227ENST00000554491 ZC3H12CQ9C0D7 883 aaKnown RBP6.46□□□□□ -1.38
ATXN3-227ENST00000554491 CCDC86Q9H6F5 360 aaKnown RBP6.46□□□□□ -1.38
ATXN3-227ENST00000554491 ZFYVE1Q9HBF4 777 aa6.46□□□□□ -1.38
ATXN3-227ENST00000554491 ARID1BQ8NFD5 2236 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-227ENST00000554491 ARAP3Q8WWN8 1544 aa6.45□□□□□ -1.38
ATXN3-227ENST00000554491 IQGAP2Q13576 1575 aa6.45□□□□□ -1.38
ATXN3-227ENST00000554491 FRMPD1Q5SYB0 1578 aa6.45□□□□□ -1.38
ATXN3-227ENST00000554491 FER1L4A9Z1Z3 1794 aa6.45□□□□□ -1.38
ATXN3-227ENST00000554491 STRCQ7RTU9 1775 aa6.45□□□□□ -1.38
ATXN3-227ENST00000554491 GPR182O15218 404 aa6.45□□□□□ -1.38
ATXN3-227ENST00000554491 IGHA2P01877 340 aa6.45□□□□□ -1.38
ATXN3-227ENST00000554491 NEFLP07196 543 aa6.45□□□□□ -1.38
ATXN3-227ENST00000554491 AP3B2Q13367 1082 aa6.45□□□□□ -1.38
ATXN3-227ENST00000554491 SPRED2Q7Z698 418 aa6.45□□□□□ -1.38
ATXN3-227ENST00000554491 BCL7CQ8WUZ0 217 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-227ENST00000554491 CCDC74AQ96AQ1 378 aa6.45□□□□□ -1.38
ATXN3-227ENST00000554491 CARMIL2Q6F5E8 1435 aa6.44□□□□□ -1.38
ATXN3-227ENST00000554491 TMEM238LA0A1B0GVL6 79 aa6.44□□□□□ -1.38
ATXN3-227ENST00000554491 EIF1AYO14602 144 aaKnown RBP6.44□□□□□ -1.38
ATXN3-227ENST00000554491 TMPRSS2O15393 492 aa6.44□□□□□ -1.38
ATXN3-227ENST00000554491 HSPA2P54652 639 aa6.44□□□□□ -1.38
ATXN3-227ENST00000554491 PTPN12Q05209 780 aaKnown RBP6.44□□□□□ -1.38
ATXN3-227ENST00000554491 CDK5R2Q13319 367 aa6.44□□□□□ -1.38
ATXN3-227ENST00000554491 PDE3BQ13370 1112 aa6.44□□□□□ -1.38
ATXN3-227ENST00000554491 PRPF40BQ6NWY9 871 aaKnown RBP6.44□□□□□ -1.38
ATXN3-227ENST00000554491 AGBL5Q8NDL9 886 aa6.44□□□□□ -1.38
ATXN3-227ENST00000554491 NIF3L1Q9GZT8 377 aa6.44□□□□□ -1.38
ATXN3-227ENST00000554491 USTQ9Y2C2 406 aa6.44□□□□□ -1.38
ATXN3-227ENST00000554491 TTC37Q6PGP7 1564 aa6.44□□□□□ -1.38
ATXN3-227ENST00000554491 ZNF862O60290 1169 aa6.43□□□□□ -1.38
ATXN3-227ENST00000554491 GADD45BO75293 160 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-227ENST00000554491 GRM2Q14416 872 aa6.43□□□□□ -1.38
ATXN3-227ENST00000554491 FAM181AQ8N9Y4 354 aa6.43□□□□□ -1.38
ATXN3-227ENST00000554491 GLIS3Q8NEA6 775 aa6.43□□□□□ -1.38
ATXN3-227ENST00000554491 EPS8L3Q8TE67 593 aaKnown RBP6.43□□□□□ -1.38
ATXN3-227ENST00000554491 PKNOX2Q96KN3 472 aa6.43□□□□□ -1.38
ATXN3-227ENST00000554491 CRIM1Q9NZV1 1036 aa6.43□□□□□ -1.38
ATXN3-227ENST00000554491 SLC5A6Q9Y289 635 aa6.43□□□□□ -1.38
ATXN3-227ENST00000554491 U3KQE9 123 aa6.43□□□□□ -1.38
ATXN3-227ENST00000554491 MED1Q15648 1581 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-227ENST00000554491 CD109Q6YHK3 1445 aa6.42□□□□□ -1.38
ATXN3-227ENST00000554491 IQSEC2Q5JU85 1478 aa6.42□□□□□ -1.38
ATXN3-227ENST00000554491 FAM87AP0C7U9 286 aa6.42□□□□□ -1.38
ATXN3-227ENST00000554491 BNIP3Q12983 259 aa6.42□□□□□ -1.38
ATXN3-227ENST00000554491 FZD5Q13467 585 aa6.42□□□□□ -1.38
ATXN3-227ENST00000554491 RPS26P11Q5JNZ5 115 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-227ENST00000554491 B4GALNT3Q6L9W6 998 aa6.42□□□□□ -1.38
ATXN3-227ENST00000554491 TMC1Q8TDI8 760 aa6.42□□□□□ -1.38
ATXN3-227ENST00000554491 ASIC4Q96FT7 647 aa6.42□□□□□ -1.38
ATXN3-227ENST00000554491 DISC1Q9NRI5 854 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms