RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 DACT2Q5SW24 774 aa11.06□□□□□ -0.64
PRIM1-208ENST00000552590 LCE2CQ5TA81 110 aa11.06□□□□□ -0.64
PRIM1-208ENST00000552590 C17orf99Q6UX52 265 aa11.06□□□□□ -0.64
PRIM1-208ENST00000552590 MCM10Q7L590 875 aa11.06□□□□□ -0.64
PRIM1-208ENST00000552590 MIS18AQ9NYP9 233 aa11.06□□□□□ -0.64
PRIM1-208ENST00000552590 FAM205AQ6ZU69 1335 aa11.05□□□□□ -0.64
PRIM1-208ENST00000552590 SH3TC1Q8TE82 1336 aa11.05□□□□□ -0.64
PRIM1-208ENST00000552590 COL1A1P02452 1464 aaPredicted RBP11.05□□□□□ -0.64
PRIM1-208ENST00000552590 XIRP2A4UGR9 3374 aa11.05□□□□□ -0.64
PRIM1-208ENST00000552590 AXIN1O15169 862 aa11.05□□□□□ -0.64
PRIM1-208ENST00000552590 DIAPH1O60610 1272 aaKnown RBP11.05□□□□□ -0.64
PRIM1-208ENST00000552590 ELNP15502 786 aa11.05□□□□□ -0.64
PRIM1-208ENST00000552590 SLC4A3P48751 1232 aa11.05□□□□□ -0.64
PRIM1-208ENST00000552590 PODNQ7Z5L7 613 aa11.05□□□□□ -0.64
PRIM1-208ENST00000552590 ADAMTS19Q8TE59 1207 aa11.05□□□□□ -0.64
PRIM1-208ENST00000552590 ZBED3Q96IU2 234 aaPredicted RBP11.05□□□□□ -0.64
PRIM1-208ENST00000552590 C1QTNF1Q9BXJ1 281 aa11.05□□□□□ -0.64
PRIM1-208ENST00000552590 TTYH1Q9H313 450 aaPredicted RBP11.05□□□□□ -0.64
PRIM1-208ENST00000552590 PANK3Q9H999 370 aa11.05□□□□□ -0.64
PRIM1-208ENST00000552590 MYO9BQ13459 2157 aa11.05□□□□□ -0.64
PRIM1-208ENST00000552590 BTBD19C9JJ37 291 aa11.04□□□□□ -0.64
PRIM1-208ENST00000552590 INHAP05111 366 aa11.04□□□□□ -0.64
PRIM1-208ENST00000552590 RPS8P62241 208 aaKnown RBP11.04□□□□□ -0.64
PRIM1-208ENST00000552590 HELBQ8NG08 1087 aaPredicted RBP11.04□□□□□ -0.64
PRIM1-208ENST00000552590 PHACTR3Q96KR7 559 aa11.04□□□□□ -0.64
PRIM1-208ENST00000552590 UHRF1Q96T88 793 aaPredicted RBP11.04□□□□□ -0.64
PRIM1-208ENST00000552590 THUMPD2Q9BTF0 503 aaKnown RBP11.04□□□□□ -0.64
PRIM1-208ENST00000552590 PAK6Q9NQU5 681 aaPredicted RBP11.04□□□□□ -0.64
PRIM1-208ENST00000552590 PKD2L1Q9P0L9 805 aa11.04□□□□□ -0.64
PRIM1-208ENST00000552590 GABRQQ9UN88 632 aa11.04□□□□□ -0.64
PRIM1-208ENST00000552590 ZDBF2Q9HCK1 2354 aa11.03□□□□□ -0.64
PRIM1-208ENST00000552590 FAM181BA6NEQ2 426 aa11.03□□□□□ -0.64
PRIM1-208ENST00000552590 ADCY3O60266 1144 aa11.03□□□□□ -0.64
PRIM1-208ENST00000552590 CAPN2P17655 700 aa11.03□□□□□ -0.64
PRIM1-208ENST00000552590 DCTN1Q14203 1278 aa11.03□□□□□ -0.64
PRIM1-208ENST00000552590 KIAA0825Q8IV33 1275 aa11.03□□□□□ -0.64
PRIM1-208ENST00000552590 LRFN3Q9BTN0 628 aa11.03□□□□□ -0.64
PRIM1-208ENST00000552590 WDFY4Q6ZS81 3184 aa11.02□□□□□ -0.64
PRIM1-208ENST00000552590 SF3B3Q15393 1217 aaKnown RBP11.02□□□□□ -0.65
PRIM1-208ENST00000552590 CTC1Q2NKJ3 1217 aa11.02□□□□□ -0.65
PRIM1-208ENST00000552590 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.02□□□□□ -0.65
PRIM1-208ENST00000552590 ADGRA2Q96PE1 1338 aa11.02□□□□□ -0.65
PRIM1-208ENST00000552590 PPP2R3BQ9Y5P8 575 aa11.02□□□□□ -0.65
PRIM1-208ENST00000552590 CLRN2A0PK11 232 aa11.01□□□□□ -0.65
PRIM1-208ENST00000552590 U2SURPO15042 1029 aaKnown RBP11.01□□□□□ -0.65
PRIM1-208ENST00000552590 FOXC1Q12948 553 aa11.01□□□□□ -0.65
PRIM1-208ENST00000552590 PCDHAC2Q9Y5I4 1007 aa11.01□□□□□ -0.65
PRIM1-208ENST00000552590 CFAP54Q96N23 3096 aa11.01□□□□□ -0.65
PRIM1-208ENST00000552590 ZNF804BA4D1E1 1349 aa11□□□□□ -0.65
PRIM1-208ENST00000552590 MYO3BQ8WXR4 1341 aa11□□□□□ -0.65
PRIM1-208ENST00000552590 TERTO14746 1132 aaKnown RBP11□□□□□ -0.65
PRIM1-208ENST00000552590 CETPP11597 493 aa11□□□□□ -0.65
PRIM1-208ENST00000552590 VGLL4Q14135 290 aa11□□□□□ -0.65
PRIM1-208ENST00000552590 PDIA6Q15084 440 aa11□□□□□ -0.65
PRIM1-208ENST00000552590 RTF1Q92541 710 aaKnown RBP11□□□□□ -0.65
PRIM1-208ENST00000552590 ASB2Q96Q27 587 aa11□□□□□ -0.65
PRIM1-208ENST00000552590 P2RX7Q99572 595 aaKnown RBP11□□□□□ -0.65
PRIM1-208ENST00000552590 C11orf49Q9H6J7 331 aa11□□□□□ -0.65
PRIM1-208ENST00000552590 ZCCHC17Q9NP64 241 aaKnown RBP11□□□□□ -0.65
PRIM1-208ENST00000552590 WDR70Q9NW82 654 aa11□□□□□ -0.65
PRIM1-208ENST00000552590 TCF20Q9UGU0 1960 aaKnown RBP11□□□□□ -0.65
PRIM1-208ENST00000552590 DDX60LQ5H9U9 1706 aaKnown RBP11□□□□□ -0.65
PRIM1-208ENST00000552590 DLGAP5Q15398 846 aa11□□□□□ -0.65
PRIM1-208ENST00000552590 STRIP1Q5VSL9 837 aa11□□□□□ -0.65
PRIM1-208ENST00000552590 ATXN2LQ8WWM7 1075 aaKnown RBP11□□□□□ -0.65
PRIM1-208ENST00000552590 FAM89AQ96GI7 184 aa11□□□□□ -0.65
PRIM1-208ENST00000552590 NECAB3Q96P71 396 aaPredicted RBP11□□□□□ -0.65
PRIM1-208ENST00000552590 VEZTQ9HBM0 779 aa11□□□□□ -0.65
PRIM1-208ENST00000552590 SEC31BQ9NQW1 1179 aa11□□□□□ -0.65
PRIM1-208ENST00000552590 MGAMO43451 1857 aa10.99□□□□□ -0.65
PRIM1-208ENST00000552590 SPTBN4Q9H254 2564 aa10.99□□□□□ -0.65
PRIM1-208ENST00000552590 ANXA1P04083 346 aa10.99□□□□□ -0.65
PRIM1-208ENST00000552590 FLT3LGP49771 235 aa10.99□□□□□ -0.65
PRIM1-208ENST00000552590 SMCPP49901 116 aaPredicted RBP10.99□□□□□ -0.65
PRIM1-208ENST00000552590 MRE11P49959 708 aa10.99□□□□□ -0.65
PRIM1-208ENST00000552590 MMP14P50281 582 aa10.99□□□□□ -0.65
PRIM1-208ENST00000552590 FCGRTP55899 365 aa10.99□□□□□ -0.65
PRIM1-208ENST00000552590 RASA3Q14644 834 aa10.99□□□□□ -0.65
PRIM1-208ENST00000552590 SUZ12Q15022 739 aaKnown RBP10.99□□□□□ -0.65
PRIM1-208ENST00000552590 TAF7Q15545 349 aaPredicted RBP10.99□□□□□ -0.65
PRIM1-208ENST00000552590 HSP90AB3PQ58FF7 597 aa10.99□□□□□ -0.65
PRIM1-208ENST00000552590 PLA2G2CQ5R387 149 aa10.99□□□□□ -0.65
PRIM1-208ENST00000552590 LRP10Q7Z4F1 713 aa10.99□□□□□ -0.65
PRIM1-208ENST00000552590 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.99□□□□□ -0.65
PRIM1-208ENST00000552590 DOCK3Q8IZD9 2030 aa10.98□□□□□ -0.65
PRIM1-208ENST00000552590 REV3LO60673 3130 aa10.98□□□□□ -0.65
PRIM1-208ENST00000552590 AOX1Q06278 1338 aa10.98□□□□□ -0.65
PRIM1-208ENST00000552590 RTL5Q5HYW3 569 aaPredicted RBP10.98□□□□□ -0.65
PRIM1-208ENST00000552590 PPM1EQ8WY54 764 aa10.98□□□□□ -0.65
PRIM1-208ENST00000552590 PFASO15067 1338 aa10.97□□□□□ -0.65
PRIM1-208ENST00000552590 XDHP47989 1333 aa10.97□□□□□ -0.65
PRIM1-208ENST00000552590 PROSER3Q2NL68 480 aa10.97□□□□□ -0.65
PRIM1-208ENST00000552590 TTLL5Q6EMB2 1281 aa10.97□□□□□ -0.65
PRIM1-208ENST00000552590 PXYLP1Q8TE99 480 aa10.97□□□□□ -0.65
PRIM1-208ENST00000552590 EPHX3Q9H6B9 360 aa10.97□□□□□ -0.65
PRIM1-208ENST00000552590 TOR4AQ9NXH8 423 aa10.97□□□□□ -0.65
PRIM1-208ENST00000552590 CSADQ9Y600 493 aa10.97□□□□□ -0.65
PRIM1-208ENST00000552590 USP34Q70CQ2 3546 aa10.97□□□□□ -0.65
PRIM1-208ENST00000552590 ECM29Q5VYK3 1845 aa10.97□□□□□ -0.65
PRIM1-208ENST00000552590 SPDYE5A6NIY4 337 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms