RNA–Protein interactions for RNA: ENST00000551219.5

PTPRR-211, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 2,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-211ENST00000551219 HSD3B7Q9H2F3 369 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.68□□□□□ -1.18
PTPRR-211ENST00000551219 CEP126Q9P2H0 1117 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 C4AP0C0L4 1744 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 C4BP0C0L5 1744 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 A0A0G2JLW4 131 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 KIF28PB7ZC32 967 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 DPYSL4O14531 572 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 TRDNQ13061 729 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 NOM1Q5C9Z4 860 aaKnown RBP7.68□□□□□ -1.18
PTPRR-211ENST00000551219 TTLL5Q6EMB2 1281 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 OTUD7BQ6GQQ9 843 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 KRT28Q7Z3Y7 464 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 GPR161Q8N6U8 529 aaKnown RBP7.68□□□□□ -1.18
PTPRR-211ENST00000551219 OXER1Q8TDS5 423 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 ALG1Q9BT22 464 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.68□□□□□ -1.18
PTPRR-211ENST00000551219 C19orf44Q9H6X5 657 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 GOPCQ9HD26 462 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 NLRP2Q9NX02 1062 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 PARP3Q9Y6F1 533 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 ATRNO75882 1429 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 ALS2Q96Q42 1657 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 NWD2Q9ULI1 1742 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 STX10O60499 249 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 WDHD1O75717 1129 aaPredicted RBP7.67□□□□□ -1.18
PTPRR-211ENST00000551219 URI1O94763 535 aaPredicted RBP7.67□□□□□ -1.18
PTPRR-211ENST00000551219 PLA2G4AP47712 749 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 CABP4P57796 275 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 ANTXR2P58335 489 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 TUBB4BP68371 445 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 TBX2Q13207 712 aaPredicted RBP7.67□□□□□ -1.18
PTPRR-211ENST00000551219 TRIM29Q14134 588 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 PTPAQ15257 358 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 WASHC4Q2M389 1173 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 CCDC102BQ68D86 513 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 TXLNBQ8N3L3 684 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 PCDHB8Q9UN66 801 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 ANGEL1Q9UNK9 670 aaKnown RBP7.67□□□□□ -1.18
PTPRR-211ENST00000551219 PPP2R2CQ9Y2T4 447 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 PCDHB13Q9Y5F0 798 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 STK36Q9NRP7 1315 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 ANKRD62A6NC57 917 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 FOXP2O15409 715 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 FGAP02671 866 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 CASQ1P31415 396 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 GNL2Q13823 731 aaKnown RBP7.67□□□□□ -1.18
PTPRR-211ENST00000551219 CT47A1Q5JQC4 288 aaPredicted RBP7.67□□□□□ -1.18
PTPRR-211ENST00000551219 GORABQ5T7V8 394 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 VPS37DQ86XT2 251 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 TRIML1Q8N9V2 468 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 TMEM87BQ96K49 555 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 UBXN6Q9BZV1 441 aa7.67□□□□□ -1.18
PTPRR-211ENST00000551219 ATP1A3P13637 1013 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 METAP2P50579 478 aaKnown RBP eCLIP7.66□□□□□ -1.18
PTPRR-211ENST00000551219 GPS2Q13227 327 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 TUBB2AQ13885 445 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 LRRC24Q50LG9 513 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 SHC4Q6S5L8 630 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 KRBA2Q6ZNG9 492 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 TMEM139Q8IV31 216 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 MLKLQ8NB16 471 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 LRRN4CLQ8ND94 238 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 WASF1Q92558 559 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 MAP3K14Q99558 947 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 BAG1Q99933 345 aaPredicted RBP7.66□□□□□ -1.18
PTPRR-211ENST00000551219 TUBB2BQ9BVA1 445 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 UTP14AQ9BVJ6 771 aaKnown RBP7.66□□□□□ -1.18
PTPRR-211ENST00000551219 GPHNQ9NQX3 736 aaPredicted RBP7.66□□□□□ -1.18
PTPRR-211ENST00000551219 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.66□□□□□ -1.18
PTPRR-211ENST00000551219 VWA3AA6NCI4 1184 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 SH2B2O14492 632 aaPredicted RBP7.66□□□□□ -1.18
PTPRR-211ENST00000551219 NPHP1O15259 732 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 ABL2P42684 1182 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 MAP3K9P80192 1104 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 FKBP4Q02790 459 aaKnown RBP eCLIP7.66□□□□□ -1.18
PTPRR-211ENST00000551219 SLC20A2Q08357 652 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 KRT40Q6A162 431 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 CNNM3Q8NE01 707 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 RABGGTAQ92696 567 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 ORAI2Q96SN7 254 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 CARD6Q9BX69 1037 aa7.66□□□□□ -1.18
PTPRR-211ENST00000551219 POTEB2H3BUK9 544 aa7.65□□□□□ -1.18
PTPRR-211ENST00000551219 MARCH6O60337 910 aa7.65□□□□□ -1.18
PTPRR-211ENST00000551219 MARCKSP29966 332 aaPredicted RBP7.65□□□□□ -1.18
PTPRR-211ENST00000551219 HAND2P61296 217 aa7.65□□□□□ -1.18
PTPRR-211ENST00000551219 TTF1Q15361 905 aaPredicted RBP7.65□□□□□ -1.18
PTPRR-211ENST00000551219 CCDC57Q2TAC2 916 aa7.65□□□□□ -1.18
PTPRR-211ENST00000551219 SPECC1LQ69YQ0 1117 aa7.65□□□□□ -1.18
PTPRR-211ENST00000551219 KANK3Q6NY19 840 aa7.65□□□□□ -1.18
PTPRR-211ENST00000551219 ENOX1Q8TC92 643 aaKnown RBP7.65□□□□□ -1.18
PTPRR-211ENST00000551219 DPF2Q92785 391 aa7.65□□□□□ -1.18
PTPRR-211ENST00000551219 GOLGA1Q92805 767 aa7.65□□□□□ -1.18
PTPRR-211ENST00000551219 DDX27Q96GQ7 796 aaKnown RBP7.65□□□□□ -1.18
PTPRR-211ENST00000551219 ZNF512BQ96KM6 892 aaPredicted RBP7.65□□□□□ -1.18
PTPRR-211ENST00000551219 KCNH3Q9ULD8 1083 aa7.65□□□□□ -1.18
PTPRR-211ENST00000551219 MRFAP1Q9Y605 127 aa7.65□□□□□ -1.18
PTPRR-211ENST00000551219 NID2Q14112 1375 aa7.65□□□□□ -1.18
PTPRR-211ENST00000551219 SETD1BQ9UPS6 1966 aaKnown RBP7.65□□□□□ -1.18
PTPRR-211ENST00000551219 GPAA1O43292 621 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms