RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 BEND3Q5T5X7 828 aa13.88□□□□□ -0.19
NR4A1-215ENST00000550557 SIRT2Q8IXJ6 389 aa13.88□□□□□ -0.19
NR4A1-215ENST00000550557 KIFC2Q96AC6 838 aa13.88□□□□□ -0.19
NR4A1-215ENST00000550557 GINS2Q9Y248 185 aa13.88□□□□□ -0.19
NR4A1-215ENST00000550557 NDUFB9Q9Y6M9 179 aa13.88□□□□□ -0.19
NR4A1-215ENST00000550557 ZSCAN22P10073 491 aaPredicted RBP13.88□□□□□ -0.19
NR4A1-215ENST00000550557 LRRC24Q50LG9 513 aa13.88□□□□□ -0.19
NR4A1-215ENST00000550557 SSH3Q8TE77 659 aa13.88□□□□□ -0.19
NR4A1-215ENST00000550557 GLT8D2Q9H1C3 349 aa13.88□□□□□ -0.19
NR4A1-215ENST00000550557 ARPP21Q9UBL0 812 aaPredicted RBP13.88□□□□□ -0.19
NR4A1-215ENST00000550557 TRIM75PA6NK02 468 aa13.88□□□□□ -0.19
NR4A1-215ENST00000550557 CAMK4Q16566 473 aa13.88□□□□□ -0.19
NR4A1-215ENST00000550557 CERKLQ49MI3 558 aaPredicted RBP13.88□□□□□ -0.19
NR4A1-215ENST00000550557 FBXO41Q8TF61 875 aa13.88□□□□□ -0.19
NR4A1-215ENST00000550557 PHACTR2O75167 634 aa13.88□□□□□ -0.19
NR4A1-215ENST00000550557 CETN2P41208 172 aa13.88□□□□□ -0.19
NR4A1-215ENST00000550557 PPM1FP49593 454 aaPredicted RBP13.88□□□□□ -0.19
NR4A1-215ENST00000550557 VPS36Q86VN1 386 aa13.88□□□□□ -0.19
NR4A1-215ENST00000550557 CCDC112Q8NEF3 446 aa13.88□□□□□ -0.19
NR4A1-215ENST00000550557 NAP1L4Q99733 375 aaKnown RBP13.88□□□□□ -0.19
NR4A1-215ENST00000550557 USP17L12C9JPN9 530 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 USP17L21D6R901 530 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 USP8P40818 1118 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 APOBRQ0VD83 1088 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 PREX1Q8TCU6 1659 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 TMEM87BQ96K49 555 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 CSRNP1Q96S65 589 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 SPATA31A1Q5TZJ5 1347 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 USP17L3A6NCW0 530 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 USP17L4A6NCW7 530 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 DYNC1I1O14576 645 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 EPB41L2O43491 1005 aaKnown RBP13.87□□□□□ -0.19
NR4A1-215ENST00000550557 ADCY5O95622 1261 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 CFAP100Q494V2 611 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 SUSD4Q5VX71 490 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 USP17L1Q7RTZ2 530 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 FNBP4Q8N3X1 1017 aaPredicted RBP13.87□□□□□ -0.19
NR4A1-215ENST00000550557 C2orf69Q8N8R5 385 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 ANTXR1Q9H6X2 564 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 ZKSCAN5Q9Y2L8 839 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 IREB2P48200 963 aaKnown RBP13.87□□□□□ -0.19
NR4A1-215ENST00000550557 CCNA1P78396 465 aa13.87□□□□□ -0.19
NR4A1-215ENST00000550557 KRT2P35908 639 aa13.86□□□□□ -0.19
NR4A1-215ENST00000550557 TTC16Q8NEE8 873 aa13.86□□□□□ -0.19
NR4A1-215ENST00000550557 SLC10A4Q96EP9 437 aa13.86□□□□□ -0.19
NR4A1-215ENST00000550557 ZSCAN16Q9H4T2 348 aaPredicted RBP13.86□□□□□ -0.19
NR4A1-215ENST00000550557 PUF60Q9UHX1 559 aaKnown RBP13.86□□□□□ -0.19
NR4A1-215ENST00000550557 SEMA3EO15041 775 aa13.86□□□□□ -0.19
NR4A1-215ENST00000550557 CFBP00751 764 aa13.86□□□□□ -0.19
NR4A1-215ENST00000550557 UBE2HP62256 183 aa13.86□□□□□ -0.19
NR4A1-215ENST00000550557 KANK3Q6NY19 840 aa13.86□□□□□ -0.19
NR4A1-215ENST00000550557 EXOC1Q9NV70 894 aa13.86□□□□□ -0.19
NR4A1-215ENST00000550557 MYO3AQ8NEV4 1616 aa13.86□□□□□ -0.19
NR4A1-215ENST00000550557 STAT6P42226 847 aa13.86□□□□□ -0.19
NR4A1-215ENST00000550557 MTIF2P46199 727 aaKnown RBP13.86□□□□□ -0.19
NR4A1-215ENST00000550557 USH1GQ495M9 461 aa13.86□□□□□ -0.19
NR4A1-215ENST00000550557 APBB1IPQ7Z5R6 666 aaPredicted RBP13.86□□□□□ -0.19
NR4A1-215ENST00000550557 AZI2Q9H6S1 392 aa13.86□□□□□ -0.19
NR4A1-215ENST00000550557 TAF12Q16514 161 aa13.85□□□□□ -0.19
NR4A1-215ENST00000550557 GRIPAP1Q4V328 841 aa13.85□□□□□ -0.19
NR4A1-215ENST00000550557 FERMT2Q96AC1 680 aa13.85□□□□□ -0.19
NR4A1-215ENST00000550557 SGSM2O43147 1006 aa13.85□□□□□ -0.19
NR4A1-215ENST00000550557 FAM47CQ5HY64 1035 aa13.85□□□□□ -0.19
NR4A1-215ENST00000550557 AK2P54819 239 aa13.85□□□□□ -0.19
NR4A1-215ENST00000550557 DEFB132Q7Z7B7 95 aa13.85□□□□□ -0.19
NR4A1-215ENST00000550557 ANO10Q9NW15 660 aa13.85□□□□□ -0.19
NR4A1-215ENST00000550557 COL15A1P39059 1388 aa13.85□□□□□ -0.19
NR4A1-215ENST00000550557 USP17L8P0C7I0 530 aa13.85□□□□□ -0.19
NR4A1-215ENST00000550557 ATP5JP18859 108 aa13.85□□□□□ -0.19
NR4A1-215ENST00000550557 ICA1Q05084 483 aa13.85□□□□□ -0.19
NR4A1-215ENST00000550557 ENOX2Q16206 610 aaKnown RBP13.85□□□□□ -0.19
NR4A1-215ENST00000550557 PDCL2Q8N4E4 241 aa13.85□□□□□ -0.19
NR4A1-215ENST00000550557 OSBPL3Q9H4L5 887 aa13.85□□□□□ -0.19
NR4A1-215ENST00000550557 CTDSPL2Q05D32 466 aa13.84□□□□□ -0.19
NR4A1-215ENST00000550557 IQCA1LA6NCM1 817 aa13.84□□□□□ -0.19
NR4A1-215ENST00000550557 FLOT1O75955 427 aa13.84□□□□□ -0.19
NR4A1-215ENST00000550557 FAM13AO94988 1023 aa13.84□□□□□ -0.19
NR4A1-215ENST00000550557 NCAPG2Q86XI2 1143 aa13.84□□□□□ -0.19
NR4A1-215ENST00000550557 DHX37Q8IY37 1157 aaKnown RBP13.84□□□□□ -0.19
NR4A1-215ENST00000550557 ANKRD35Q8N283 1001 aa13.84□□□□□ -0.19
NR4A1-215ENST00000550557 CARMIL3Q8ND23 1372 aa13.84□□□□□ -0.19
NR4A1-215ENST00000550557 PHKA1P46020 1223 aa13.84□□□□□ -0.19
NR4A1-215ENST00000550557 FAM212AQ96EL1 285 aa13.84□□□□□ -0.19
NR4A1-215ENST00000550557 PUS3Q9BZE2 481 aaKnown RBP13.84□□□□□ -0.19
NR4A1-215ENST00000550557 COA1Q9GZY4 146 aa13.84□□□□□ -0.19
NR4A1-215ENST00000550557 DKC1O60832 514 aaKnown RBP eCLIP13.84□□□□□ -0.19
NR4A1-215ENST00000550557 MKRN3Q13064 507 aaKnown RBP13.84□□□□□ -0.19
NR4A1-215ENST00000550557 LETM2Q2VYF4 491 aa13.84□□□□□ -0.19
NR4A1-215ENST00000550557 IMPG2Q9BZV3 1241 aa13.84□□□□□ -0.19
NR4A1-215ENST00000550557 SSH2Q76I76 1423 aa13.83□□□□□ -0.19
NR4A1-215ENST00000550557 M0QZ92 97 aa13.83□□□□□ -0.19
NR4A1-215ENST00000550557 ALAS1P13196 640 aa13.83□□□□□ -0.19
NR4A1-215ENST00000550557 KRT13P13646 458 aa13.83□□□□□ -0.19
NR4A1-215ENST00000550557 ABCB5Q2M3G0 1257 aa13.83□□□□□ -0.19
NR4A1-215ENST00000550557 FSD2A1L4K1 749 aa13.83□□□□□ -0.2
NR4A1-215ENST00000550557 PDE6AP16499 860 aa13.83□□□□□ -0.2
NR4A1-215ENST00000550557 FAM47AQ5JRC9 791 aa13.83□□□□□ -0.2
NR4A1-215ENST00000550557 DPP9Q86TI2 863 aa13.83□□□□□ -0.2
NR4A1-215ENST00000550557 OSBPP22059 807 aa13.83□□□□□ -0.2
NR4A1-215ENST00000550557 BARGINQ6ZT62 677 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms