RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	MCM9	Q9NXL9	1143 aa		13.81	□□□□□ -0.2
CNOT2-223	ENST00000550160	TSGA10IP	Q3SY00	556 aa		13.8	□□□□□ -0.2
CNOT2-223	ENST00000550160	MAPKAPK5	Q8IW41	473 aa		13.8	□□□□□ -0.2
CNOT2-223	ENST00000550160	KCNB2	Q92953	911 aa		13.8	□□□□□ -0.2
CNOT2-223	ENST00000550160	RNF41	Q9H4P4	317 aa	Predicted RBP	13.8	□□□□□ -0.2
CNOT2-223	ENST00000550160	TDRD3	Q9H7E2	651 aa	Known RBP	13.8	□□□□□ -0.2
CNOT2-223	ENST00000550160	GPRC5D	Q9NZD1	345 aa		13.8	□□□□□ -0.2
CNOT2-223	ENST00000550160	SNX14	Q9Y5W7	946 aa		13.8	□□□□□ -0.2
CNOT2-223	ENST00000550160	USP17L12	C9JPN9	530 aa		13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	USP17L21	D6R901	530 aa		13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	DDN	O94850	711 aa	Predicted RBP	13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	POLR3D	P05423	398 aa	Predicted RBP	13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	CYP21A2	P08686	494 aa		13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	HMGB1	P09429	215 aa	Known RBP	13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	PC	P11498	1178 aa	Known RBP	13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	HAND2	P61296	217 aa		13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	TRDN	Q13061	729 aa		13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	PICALM	Q13492	652 aa		13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	RABEP1	Q15276	862 aa		13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	KIF4B	Q2VIQ3	1234 aa		13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	SBK1	Q52WX2	424 aa		13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	TTC6	Q86TZ1	520 aa		13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	IL17RA	Q96F46	866 aa		13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	PRMT6	Q96LA8	375 aa	Predicted RBP	13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	IDI2	Q9BXS1	227 aa		13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	RBM19	Q9Y4C8	960 aa	Known RBP	13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	FLT1	P17948	1338 aa		13.79	□□□□□ -0.2
CNOT2-223	ENST00000550160	MINDY4B	A8MYZ0	360 aa		13.78	□□□□□ -0.2
CNOT2-223	ENST00000550160	WDHD1	O75717	1129 aa	Predicted RBP	13.78	□□□□□ -0.2
CNOT2-223	ENST00000550160	PPARA	Q07869	468 aa		13.78	□□□□□ -0.2
CNOT2-223	ENST00000550160	TNFAIP1	Q13829	316 aa		13.78	□□□□□ -0.2
CNOT2-223	ENST00000550160	FKBP1C	Q5VVH2	108 aa		13.78	□□□□□ -0.2
CNOT2-223	ENST00000550160	CTR9	Q6PD62	1173 aa		13.78	□□□□□ -0.2
CNOT2-223	ENST00000550160	RALYL	Q86SE5	291 aa	Known RBP	13.78	□□□□□ -0.2
CNOT2-223	ENST00000550160	TM6SF1	Q9BZW5	370 aa		13.78	□□□□□ -0.2
CNOT2-223	ENST00000550160	DHX36	Q9H2U1	1008 aa	Known RBP	13.78	□□□□□ -0.2
CNOT2-223	ENST00000550160	CNNM2	Q9H8M5	875 aa		13.78	□□□□□ -0.2
CNOT2-223	ENST00000550160	ZNF287	Q9HBT7	754 aa		13.78	□□□□□ -0.2
CNOT2-223	ENST00000550160	ZNF70	Q9UC06	446 aa	Predicted RBP	13.78	□□□□□ -0.2
CNOT2-223	ENST00000550160	MKRN1	Q9UHC7	482 aa	Known RBP	13.78	□□□□□ -0.2
CNOT2-223	ENST00000550160	ANAPC4	Q9UJX5	808 aa		13.78	□□□□□ -0.2
CNOT2-223	ENST00000550160	PALD1	Q9ULE6	856 aa		13.78	□□□□□ -0.2
CNOT2-223	ENST00000550160	GLTPD2	A6NH11	291 aa		13.77	□□□□□ -0.21
CNOT2-223	ENST00000550160	WNT10B	O00744	389 aa		13.77	□□□□□ -0.21
CNOT2-223	ENST00000550160	ST18	O60284	1047 aa		13.77	□□□□□ -0.21
CNOT2-223	ENST00000550160	ENTPD3	O75355	529 aa		13.77	□□□□□ -0.21
CNOT2-223	ENST00000550160	HLA-DOA	P06340	250 aa		13.77	□□□□□ -0.21
CNOT2-223	ENST00000550160	TNNI2	P48788	182 aa		13.77	□□□□□ -0.21
CNOT2-223	ENST00000550160	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.77	□□□□□ -0.21
CNOT2-223	ENST00000550160	RBM26	Q5T8P6	1007 aa	Known RBP	13.77	□□□□□ -0.21
CNOT2-223	ENST00000550160	MFSD6	Q6ZSS7	791 aa		13.77	□□□□□ -0.21
CNOT2-223	ENST00000550160	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.77	□□□□□ -0.21
CNOT2-223	ENST00000550160	RASEF	Q8IZ41	740 aa		13.77	□□□□□ -0.21
CNOT2-223	ENST00000550160	NCOA7	Q8NI08	942 aa		13.77	□□□□□ -0.21
CNOT2-223	ENST00000550160	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.77	□□□□□ -0.21
CNOT2-223	ENST00000550160	JAKMIP1	Q96N16	626 aa	Known RBP	13.77	□□□□□ -0.21
CNOT2-223	ENST00000550160	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.77	□□□□□ -0.21
CNOT2-223	ENST00000550160	TAOK2	Q9UL54	1235 aa		13.77	□□□□□ -0.21
CNOT2-223	ENST00000550160	PCDHAC2	Q9Y5I4	1007 aa		13.77	□□□□□ -0.21
CNOT2-223	ENST00000550160	ADAMTSL1	Q8N6G6	1762 aa		13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	CLRN2	A0PK11	232 aa		13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	IQCA1L	A6NCM1	817 aa		13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160		E7EWF7	191 aa		13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	CAST	P20810	708 aa	Known RBP	13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	NT5C2	P49902	561 aa		13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	PDE4B	Q07343	736 aa		13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	AKNAD1	Q5T1N1	836 aa		13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	C12orf60	Q5U649	245 aa		13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	BLOC1S2	Q6QNY1	142 aa		13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	SAMD7	Q7Z3H4	446 aa		13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	STAG1	Q8WVM7	1258 aa		13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	ZBED3	Q96IU2	234 aa	Predicted RBP	13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	NEK1	Q96PY6	1258 aa		13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	KRT23	Q9C075	422 aa		13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	VEZT	Q9HBM0	779 aa		13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	ADARB2	Q9NS39	739 aa	Known RBP	13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	TOMM22	Q9NS69	142 aa		13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	SAP30BP	Q9UHR5	308 aa	Known RBP	13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	HACL1	Q9UJ83	578 aa		13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	CYP46A1	Q9Y6A2	500 aa		13.76	□□□□□ -0.21
CNOT2-223	ENST00000550160	SHTN1	A0MZ66	631 aa		13.75	□□□□□ -0.21
CNOT2-223	ENST00000550160	EPS15	P42566	896 aa		13.75	□□□□□ -0.21
CNOT2-223	ENST00000550160	CACNB3	P54284	484 aa		13.75	□□□□□ -0.21
CNOT2-223	ENST00000550160	CTDSPL2	Q05D32	466 aa		13.75	□□□□□ -0.21
CNOT2-223	ENST00000550160	TCP10	Q12799	353 aa		13.75	□□□□□ -0.21
CNOT2-223	ENST00000550160	NBPF9	Q3BBW0	867 aa		13.75	□□□□□ -0.21
CNOT2-223	ENST00000550160	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.75	□□□□□ -0.21
CNOT2-223	ENST00000550160	TBC1D10C	Q8IV04	446 aa		13.75	□□□□□ -0.21
CNOT2-223	ENST00000550160	KIF2C	Q99661	725 aa		13.75	□□□□□ -0.21
CNOT2-223	ENST00000550160	TRIM34	Q9BYJ4	488 aa		13.75	□□□□□ -0.21
CNOT2-223	ENST00000550160	DDX4	Q9NQI0	724 aa	Known RBP	13.75	□□□□□ -0.21
CNOT2-223	ENST00000550160	NAV1	Q8NEY1	1877 aa		13.75	□□□□□ -0.21
CNOT2-223	ENST00000550160	COL2A1	P02458	1487 aa	Predicted RBP	13.74	□□□□□ -0.21
CNOT2-223	ENST00000550160	ROBO3	Q96MS0	1386 aa		13.74	□□□□□ -0.21
CNOT2-223	ENST00000550160	LAMA4	Q16363	1823 aa		13.74	□□□□□ -0.21
CNOT2-223	ENST00000550160	TCP10L2	B9ZVM9	353 aa		13.74	□□□□□ -0.21
CNOT2-223	ENST00000550160	NEK4	P51957	841 aa		13.74	□□□□□ -0.21
CNOT2-223	ENST00000550160	NFIA	Q12857	509 aa		13.74	□□□□□ -0.21
CNOT2-223	ENST00000550160	ADCK5	Q3MIX3	580 aa		13.74	□□□□□ -0.21
CNOT2-223	ENST00000550160	RUFY3	Q7L099	469 aa		13.74	□□□□□ -0.21

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