RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 PDZD3Q86UT5 571 aa6.38□□□□□ -1.39
CCDC170-203ENST00000544131 KRTAP4-9Q9BYQ8 210 aa6.38□□□□□ -1.39
CCDC170-203ENST00000544131 GSX1Q9H4S2 264 aaPredicted RBP6.38□□□□□ -1.39
CCDC170-203ENST00000544131 ACSS3Q9H6R3 686 aa6.38□□□□□ -1.39
CCDC170-203ENST00000544131 KRT82Q9NSB4 513 aa6.38□□□□□ -1.39
CCDC170-203ENST00000544131 GIPC1O14908 333 aa6.37□□□□□ -1.39
CCDC170-203ENST00000544131 DYNC1LI2O43237 492 aaPredicted RBP6.37□□□□□ -1.39
CCDC170-203ENST00000544131 RNGTTO60942 597 aaKnown RBP6.37□□□□□ -1.39
CCDC170-203ENST00000544131 NME2P22392 152 aa6.37□□□□□ -1.39
CCDC170-203ENST00000544131 ID3Q02535 119 aa6.37□□□□□ -1.39
CCDC170-203ENST00000544131 MAP1SQ66K74 1059 aaPredicted RBP6.37□□□□□ -1.39
CCDC170-203ENST00000544131 EMILIN2Q9BXX0 1053 aa6.37□□□□□ -1.39
CCDC170-203ENST00000544131 SRCIN1Q9C0H9 1055 aa6.37□□□□□ -1.39
CCDC170-203ENST00000544131 PIDD1Q9HB75 910 aa6.37□□□□□ -1.39
CCDC170-203ENST00000544131 LRRC4CQ9HCJ2 640 aa6.37□□□□□ -1.39
CCDC170-203ENST00000544131 CRIM1Q9NZV1 1036 aa6.37□□□□□ -1.39
CCDC170-203ENST00000544131 ZC3H7BQ9UGR2 993 aaKnown RBP6.37□□□□□ -1.39
CCDC170-203ENST00000544131 SPG7Q9UQ90 795 aa6.37□□□□□ -1.39
CCDC170-203ENST00000544131 SYNGAP1Q96PV0 1343 aa6.36□□□□□ -1.39
CCDC170-203ENST00000544131 HNRNPUQ00839 825 aaKnown RBP eCLIP6.36□□□□□ -1.39
CCDC170-203ENST00000544131 KIF4BQ2VIQ3 1234 aa6.36□□□□□ -1.39
CCDC170-203ENST00000544131 DUSP27Q5VZP5 1158 aa6.36□□□□□ -1.39
CCDC170-203ENST00000544131 ZNF765Q7L2R6 523 aa6.36□□□□□ -1.39
CCDC170-203ENST00000544131 NECAB3Q96P71 396 aaPredicted RBP6.36□□□□□ -1.39
CCDC170-203ENST00000544131 FANCD2OSQ96PS1 177 aa6.36□□□□□ -1.39
CCDC170-203ENST00000544131 CEP44Q9C0F1 390 aa6.36□□□□□ -1.39
CCDC170-203ENST00000544131 ATXN3LQ9H3M9 355 aa6.36□□□□□ -1.39
CCDC170-203ENST00000544131 DISC1Q9NRI5 854 aa6.36□□□□□ -1.39
CCDC170-203ENST00000544131 PAPLNO95428 1278 aa6.35□□□□□ -1.39
CCDC170-203ENST00000544131 BMP6P22004 513 aa6.35□□□□□ -1.39
CCDC170-203ENST00000544131 MPRIPQ6WCQ1 1025 aa6.35□□□□□ -1.39
CCDC170-203ENST00000544131 SND1Q7KZF4 910 aaKnown RBP eCLIP6.35□□□□□ -1.39
CCDC170-203ENST00000544131 GRIN3AQ8TCU5 1115 aa6.35□□□□□ -1.39
CCDC170-203ENST00000544131 GPBAR1Q8TDU6 330 aa6.35□□□□□ -1.39
CCDC170-203ENST00000544131 ACSBG1Q96GR2 724 aa6.35□□□□□ -1.39
CCDC170-203ENST00000544131 C12orf49Q9H741 205 aa6.35□□□□□ -1.39
CCDC170-203ENST00000544131 ANKRD33BA6NCL7 494 aa6.34□□□□□ -1.39
CCDC170-203ENST00000544131 ENC1O14682 589 aa6.34□□□□□ -1.39
CCDC170-203ENST00000544131 PAGE1O75459 146 aa6.34□□□□□ -1.39
CCDC170-203ENST00000544131 USP17L7P0C7H9 530 aa6.34□□□□□ -1.39
CCDC170-203ENST00000544131 HCLS1P14317 486 aaPredicted RBP6.34□□□□□ -1.39
CCDC170-203ENST00000544131 CYP27A1Q02318 531 aa6.34□□□□□ -1.39
CCDC170-203ENST00000544131 TTLL4Q14679 1199 aa6.34□□□□□ -1.39
CCDC170-203ENST00000544131 SEZ6L2Q6UXD5 910 aa6.34□□□□□ -1.39
CCDC170-203ENST00000544131 SMYD4Q8IYR2 804 aaPredicted RBP6.34□□□□□ -1.39
CCDC170-203ENST00000544131 SSU72Q9NP77 194 aaKnown RBP6.34□□□□□ -1.39
CCDC170-203ENST00000544131 C1GALT1Q9NS00 363 aa6.34□□□□□ -1.39
CCDC170-203ENST00000544131 FAM8A1Q9UBU6 413 aa6.34□□□□□ -1.39
CCDC170-203ENST00000544131 PPM1HQ9ULR3 514 aa6.34□□□□□ -1.39
CCDC170-203ENST00000544131 SAMM50Q9Y512 469 aa6.34□□□□□ -1.39
CCDC170-203ENST00000544131 PCDHGC5Q9Y5F6 944 aa6.34□□□□□ -1.39
CCDC170-203ENST00000544131 CSADQ9Y600 493 aa6.34□□□□□ -1.39
CCDC170-203ENST00000544131 ZNF252P-AS1Q0IIN9 211 aa6.33□□□□□ -1.4
CCDC170-203ENST00000544131 ZNF648Q5T619 568 aaPredicted RBP6.33□□□□□ -1.4
CCDC170-203ENST00000544131 ZNF574Q6ZN55 896 aaPredicted RBP6.33□□□□□ -1.4
CCDC170-203ENST00000544131 RNF19AQ9NV58 838 aa6.33□□□□□ -1.4
CCDC170-203ENST00000544131 CDK5R2Q13319 367 aa6.32□□□□□ -1.4
CCDC170-203ENST00000544131 PLCL1Q15111 1095 aa6.32□□□□□ -1.4
CCDC170-203ENST00000544131 EAPPQ56P03 285 aaPredicted RBP6.32□□□□□ -1.4
CCDC170-203ENST00000544131 LCE4AQ5TA78 99 aa6.32□□□□□ -1.4
CCDC170-203ENST00000544131 OGFOD3Q6PK18 319 aa6.32□□□□□ -1.4
CCDC170-203ENST00000544131 WFDC3Q8IUB2 231 aa6.32□□□□□ -1.4
CCDC170-203ENST00000544131 BCL7CQ8WUZ0 217 aaPredicted RBP6.32□□□□□ -1.4
CCDC170-203ENST00000544131 FRMD6Q96NE9 622 aa6.32□□□□□ -1.4
CCDC170-203ENST00000544131 PCOLCE2Q9UKZ9 415 aa6.32□□□□□ -1.4
CCDC170-203ENST00000544131 TTF2Q9UNY4 1162 aaKnown RBP6.32□□□□□ -1.4
CCDC170-203ENST00000544131 SLC5A6Q9Y289 635 aa6.32□□□□□ -1.4
CCDC170-203ENST00000544131 PRPF40AO75400 957 aaKnown RBP6.31□□□□□ -1.4
CCDC170-203ENST00000544131 CELA3AP09093 270 aa6.31□□□□□ -1.4
CCDC170-203ENST00000544131 EIF4BP23588 611 aaKnown RBP6.31□□□□□ -1.4
CCDC170-203ENST00000544131 GNA15P30679 374 aa6.31□□□□□ -1.4
CCDC170-203ENST00000544131 LRRC14Q15048 493 aa6.31□□□□□ -1.4
CCDC170-203ENST00000544131 ZNF792Q3KQV3 632 aa6.31□□□□□ -1.4
CCDC170-203ENST00000544131 ZC3H12AQ5D1E8 599 aaKnown RBP6.31□□□□□ -1.4
CCDC170-203ENST00000544131 RASIP1Q5U651 963 aa6.31□□□□□ -1.4
CCDC170-203ENST00000544131 LLGL2Q6P1M3 1020 aa6.31□□□□□ -1.4
CCDC170-203ENST00000544131 DUSP9Q99956 384 aaKnown RBP6.31□□□□□ -1.4
CCDC170-203ENST00000544131 PICK1Q9NRD5 415 aa6.31□□□□□ -1.4
CCDC170-203ENST00000544131 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.31□□□□□ -1.4
CCDC170-203ENST00000544131 DCDC2CA8MYV0 355 aa6.3□□□□□ -1.4
CCDC170-203ENST00000544131 NEFMP07197 916 aa6.3□□□□□ -1.4
CCDC170-203ENST00000544131 FAM87AP0C7U9 286 aa6.3□□□□□ -1.4
CCDC170-203ENST00000544131 PPM1JQ5JR12 505 aa6.3□□□□□ -1.4
CCDC170-203ENST00000544131 PCNX4Q63HM2 1172 aa6.3□□□□□ -1.4
CCDC170-203ENST00000544131 SPRED2Q7Z698 418 aa6.3□□□□□ -1.4
CCDC170-203ENST00000544131 C12orf40Q86WS4 652 aa6.3□□□□□ -1.4
CCDC170-203ENST00000544131 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.3□□□□□ -1.4
CCDC170-203ENST00000544131 ISL2Q96A47 359 aa6.3□□□□□ -1.4
CCDC170-203ENST00000544131 PCDHA4Q9UN74 947 aa6.3□□□□□ -1.4
CCDC170-203ENST00000544131 AK5Q9Y6K8 562 aa6.3□□□□□ -1.4
CCDC170-203ENST00000544131 CARMIL2Q6F5E8 1435 aa6.3□□□□□ -1.4
CCDC170-203ENST00000544131 BIN1O00499 593 aa6.29□□□□□ -1.4
CCDC170-203ENST00000544131 TRIM37O94972 964 aa6.29□□□□□ -1.4
CCDC170-203ENST00000544131 ERVK-24P63145 666 aa6.29□□□□□ -1.4
CCDC170-203ENST00000544131 ZNF124Q15973 351 aa6.29□□□□□ -1.4
CCDC170-203ENST00000544131 CYP27C1Q4G0S4 372 aa6.29□□□□□ -1.4
CCDC170-203ENST00000544131 STK11IPQ8N1F8 1099 aa6.29□□□□□ -1.4
CCDC170-203ENST00000544131 RNF214Q8ND24 703 aa6.29□□□□□ -1.4
CCDC170-203ENST00000544131 CACNA2D2Q9NY47 1150 aa6.29□□□□□ -1.4
CCDC170-203ENST00000544131 CYP8B1Q9UNU6 501 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms