RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 WDHD1O75717 1129 aaPredicted RBP12.67□□□□□ -0.38
DDB1-221ENST00000543162 PPARAQ07869 468 aa12.67□□□□□ -0.38
DDB1-221ENST00000543162 PICALMQ13492 652 aa12.67□□□□□ -0.38
DDB1-221ENST00000543162 ADCK5Q3MIX3 580 aa12.67□□□□□ -0.38
DDB1-221ENST00000543162 SBK1Q52WX2 424 aa12.67□□□□□ -0.38
DDB1-221ENST00000543162 TMOD2Q9NZR1 351 aa12.67□□□□□ -0.38
DDB1-221ENST00000543162 SAP30BPQ9UHR5 308 aaKnown RBP12.67□□□□□ -0.38
DDB1-221ENST00000543162 FOCADQ5VW36 1801 aa12.67□□□□□ -0.38
DDB1-221ENST00000543162 ZC3H4Q9UPT8 1303 aaKnown RBP12.66□□□□□ -0.38
DDB1-221ENST00000543162 CYP2D7A0A087X1C5 515 aa12.66□□□□□ -0.38
DDB1-221ENST00000543162 DCAF8L1A6NGE4 600 aa12.66□□□□□ -0.38
DDB1-221ENST00000543162 MYO1BO43795 1136 aa12.66□□□□□ -0.38
DDB1-221ENST00000543162 DDNO94850 711 aaPredicted RBP12.66□□□□□ -0.38
DDB1-221ENST00000543162 POLR3DP05423 398 aaPredicted RBP12.66□□□□□ -0.38
DDB1-221ENST00000543162 SLC3A2P08195 630 aaKnown RBP12.66□□□□□ -0.38
DDB1-221ENST00000543162 CASTP20810 708 aaKnown RBP12.66□□□□□ -0.38
DDB1-221ENST00000543162 NEK4P51957 841 aa12.66□□□□□ -0.38
DDB1-221ENST00000543162 CTDSPL2Q05D32 466 aa12.66□□□□□ -0.38
DDB1-221ENST00000543162 RBM26Q5T8P6 1007 aaKnown RBP12.66□□□□□ -0.38
DDB1-221ENST00000543162 DPY19L2Q6NUT2 758 aa12.66□□□□□ -0.38
DDB1-221ENST00000543162 BLOC1S2Q6QNY1 142 aa12.66□□□□□ -0.38
DDB1-221ENST00000543162 STOX1Q6ZVD7 989 aa12.66□□□□□ -0.38
DDB1-221ENST00000543162 TBC1D10CQ8IV04 446 aa12.66□□□□□ -0.38
DDB1-221ENST00000543162 NEK1Q96PY6 1258 aa12.66□□□□□ -0.38
DDB1-221ENST00000543162 IDI2Q9BXS1 227 aa12.66□□□□□ -0.38
DDB1-221ENST00000543162 UPF3BQ9BZI7 483 aaKnown RBP12.66□□□□□ -0.38
DDB1-221ENST00000543162 NBPF3Q9H094 633 aa12.66□□□□□ -0.38
DDB1-221ENST00000543162 ZSWIM6Q9HCJ5 1215 aa12.66□□□□□ -0.38
DDB1-221ENST00000543162 GPRC5DQ9NZD1 345 aa12.66□□□□□ -0.38
DDB1-221ENST00000543162 ANAPC4Q9UJX5 808 aa12.66□□□□□ -0.38
DDB1-221ENST00000543162 CYP46A1Q9Y6A2 500 aa12.66□□□□□ -0.38
DDB1-221ENST00000543162 SRCAPQ6ZRS2 3230 aa12.65□□□□□ -0.38
DDB1-221ENST00000543162 CLRN2A0PK11 232 aa12.65□□□□□ -0.38
DDB1-221ENST00000543162 ST18O60284 1047 aa12.65□□□□□ -0.38
DDB1-221ENST00000543162 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
DDB1-221ENST00000543162 HMGB1P09429 215 aaKnown RBP12.65□□□□□ -0.38
DDB1-221ENST00000543162 CYP2D6P10635 497 aa12.65□□□□□ -0.38
DDB1-221ENST00000543162 LMOD1P29536 600 aaPredicted RBP12.65□□□□□ -0.38
DDB1-221ENST00000543162 CACNB3P54284 484 aa12.65□□□□□ -0.38
DDB1-221ENST00000543162 NFIAQ12857 509 aa12.65□□□□□ -0.38
DDB1-221ENST00000543162 TRDNQ13061 729 aa12.65□□□□□ -0.38
DDB1-221ENST00000543162 SPDYE2Q495Y8 402 aa12.65□□□□□ -0.38
DDB1-221ENST00000543162 TBC1D10BQ4KMP7 808 aaPredicted RBP12.65□□□□□ -0.38
DDB1-221ENST00000543162 AKNAD1Q5T1N1 836 aa12.65□□□□□ -0.38
DDB1-221ENST00000543162 C12orf60Q5U649 245 aa12.65□□□□□ -0.38
DDB1-221ENST00000543162 MFSD6Q6ZSS7 791 aa12.65□□□□□ -0.38
DDB1-221ENST00000543162 RALYLQ86SE5 291 aaKnown RBP12.65□□□□□ -0.38
DDB1-221ENST00000543162 IL27Q8NEV9 243 aa12.65□□□□□ -0.38
DDB1-221ENST00000543162 ZBED3Q96IU2 234 aaPredicted RBP12.65□□□□□ -0.38
DDB1-221ENST00000543162 RNF41Q9H4P4 317 aaPredicted RBP12.65□□□□□ -0.38
DDB1-221ENST00000543162 DDX4Q9NQI0 724 aaKnown RBP12.65□□□□□ -0.38
DDB1-221ENST00000543162 ZNF70Q9UC06 446 aaPredicted RBP12.65□□□□□ -0.38
DDB1-221ENST00000543162 LAMB1P07942 1786 aa12.65□□□□□ -0.38
DDB1-221ENST00000543162 MYH1P12882 1939 aa12.64□□□□□ -0.39
DDB1-221ENST00000543162 WNT10BO00744 389 aa12.64□□□□□ -0.39
DDB1-221ENST00000543162 ENTPD3O75355 529 aa12.64□□□□□ -0.39
DDB1-221ENST00000543162 CPA1P15085 419 aa12.64□□□□□ -0.39
DDB1-221ENST00000543162 TCP10Q12799 353 aa12.64□□□□□ -0.39
DDB1-221ENST00000543162 KIF4BQ2VIQ3 1234 aa12.64□□□□□ -0.39
DDB1-221ENST00000543162 SLC4A8Q2Y0W8 1093 aa12.64□□□□□ -0.39
DDB1-221ENST00000543162 NBPF9Q3BBW0 867 aa12.64□□□□□ -0.39
DDB1-221ENST00000543162 RUFY3Q7L099 469 aa12.64□□□□□ -0.39
DDB1-221ENST00000543162 SAMD7Q7Z3H4 446 aa12.64□□□□□ -0.39
DDB1-221ENST00000543162 TTC6Q86TZ1 520 aa12.64□□□□□ -0.39
DDB1-221ENST00000543162 STK11IPQ8N1F8 1099 aa12.64□□□□□ -0.39
DDB1-221ENST00000543162 NCOA7Q8NI08 942 aa12.64□□□□□ -0.39
DDB1-221ENST00000543162 STAG1Q8WVM7 1258 aa12.64□□□□□ -0.39
DDB1-221ENST00000543162 OSBPL5Q9H0X9 879 aaPredicted RBP12.64□□□□□ -0.39
DDB1-221ENST00000543162 CNNM2Q9H8M5 875 aa12.64□□□□□ -0.39
DDB1-221ENST00000543162 FAM198AQ9UFP1 575 aa12.64□□□□□ -0.39
DDB1-221ENST00000543162 DDX60LQ5H9U9 1706 aaKnown RBP12.64□□□□□ -0.39
DDB1-221ENST00000543162 TCP10L2B9ZVM9 353 aa12.63□□□□□ -0.39
DDB1-221ENST00000543162 EGFRP00533 1210 aa12.63□□□□□ -0.39
DDB1-221ENST00000543162 PCP11498 1178 aaKnown RBP12.63□□□□□ -0.39
DDB1-221ENST00000543162 RPS6KB1P23443 525 aa12.63□□□□□ -0.39
DDB1-221ENST00000543162 EPS15P42566 896 aa12.63□□□□□ -0.39
DDB1-221ENST00000543162 FKBP1CQ5VVH2 108 aa12.63□□□□□ -0.39
DDB1-221ENST00000543162 KRT23Q9C075 422 aa12.63□□□□□ -0.39
DDB1-221ENST00000543162 DHX36Q9H2U1 1008 aaKnown RBP12.63□□□□□ -0.39
DDB1-221ENST00000543162 VEZTQ9HBM0 779 aa12.63□□□□□ -0.39
DDB1-221ENST00000543162 TOMM22Q9NS69 142 aa12.63□□□□□ -0.39
DDB1-221ENST00000543162 PDRG1Q9NUG6 133 aa12.63□□□□□ -0.39
DDB1-221ENST00000543162 NEDD4P46934 1319 aa12.62□□□□□ -0.39
DDB1-221ENST00000543162 ROBO3Q96MS0 1386 aa12.62□□□□□ -0.39
DDB1-221ENST00000543162 GLTPD2A6NH11 291 aa12.62□□□□□ -0.39
DDB1-221ENST00000543162 B4E1Z4 1266 aa12.62□□□□□ -0.39
DDB1-221ENST00000543162 SMIM22K7EJ46 135 aa12.62□□□□□ -0.39
DDB1-221ENST00000543162 HLA-DOAP06340 250 aa12.62□□□□□ -0.39
DDB1-221ENST00000543162 PLCD1P51178 756 aa12.62□□□□□ -0.39
DDB1-221ENST00000543162 EVX2Q03828 476 aa12.62□□□□□ -0.39
DDB1-221ENST00000543162 PDE4BQ07343 736 aa12.62□□□□□ -0.39
DDB1-221ENST00000543162 BECN1Q14457 450 aa12.62□□□□□ -0.39
DDB1-221ENST00000543162 RRP12Q5JTH9 1297 aaKnown RBP12.62□□□□□ -0.39
DDB1-221ENST00000543162 DHX32Q7L7V1 743 aaKnown RBP12.62□□□□□ -0.39
DDB1-221ENST00000543162 HSCBQ8IWL3 235 aa12.62□□□□□ -0.39
DDB1-221ENST00000543162 ZSCAN29Q8IWY8 852 aaPredicted RBP12.62□□□□□ -0.39
DDB1-221ENST00000543162 ZFPM1Q8IX07 1006 aa12.62□□□□□ -0.39
DDB1-221ENST00000543162 SNX21Q969T3 373 aa12.62□□□□□ -0.39
DDB1-221ENST00000543162 ZNF287Q9HBT7 754 aa12.62□□□□□ -0.39
DDB1-221ENST00000543162 INCENPQ9NQS7 918 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms