RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 ANO10Q9NW15 660 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 FEZ2Q9UHY8 353 aaPredicted RBP10.57□□□□□ -0.72
THBS3-211ENST00000541990 RCOR1Q9UKL0 485 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 NEDD4P46934 1319 aa10.57□□□□□ -0.72
THBS3-211ENST00000541990 NUP98P52948 1817 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 CYP21A2P08686 494 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 ATP1A3P13637 1013 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 MCAMP43121 646 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 APOBRQ0VD83 1088 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 CERS3Q8IU89 383 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 CCDC34Q96HJ3 373 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 NEK1Q96PY6 1258 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 ORC3Q9UBD5 711 aaPredicted RBP10.56□□□□□ -0.72
THBS3-211ENST00000541990 CFAP45Q9UL16 551 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 CARMIL3Q8ND23 1372 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 PTPDC1A2A3K4 754 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 CAVIN2O95810 425 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 NDUFA8P51970 172 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 CHST3Q7LGC8 479 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 HOMER1Q86YM7 354 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 FAM177A1Q8N128 213 aaPredicted RBP10.56□□□□□ -0.72
THBS3-211ENST00000541990 CARD6Q9BX69 1037 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 KCND1Q9NSA2 647 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 LCMT1Q9UIC8 334 aa10.56□□□□□ -0.72
THBS3-211ENST00000541990 CDHR2Q9BYE9 1310 aa10.55□□□□□ -0.72
THBS3-211ENST00000541990 PDE8BO95263 885 aa10.55□□□□□ -0.72
THBS3-211ENST00000541990 FAM160A1Q05DH4 1040 aa10.55□□□□□ -0.72
THBS3-211ENST00000541990 CCDC152Q4G0S7 254 aa10.55□□□□□ -0.72
THBS3-211ENST00000541990 SMARCC2Q8TAQ2 1214 aa10.55□□□□□ -0.72
THBS3-211ENST00000541990 DPF2Q92785 391 aa10.55□□□□□ -0.72
THBS3-211ENST00000541990 PLA2G12BQ9BX93 195 aa10.55□□□□□ -0.72
THBS3-211ENST00000541990 PCDHA7Q9UN72 937 aa10.55□□□□□ -0.72
THBS3-211ENST00000541990 IDH1O75874 414 aaKnown RBP10.55□□□□□ -0.72
THBS3-211ENST00000541990 SFPQP23246 707 aaKnown RBP eCLIP10.55□□□□□ -0.72
THBS3-211ENST00000541990 LMOD1P29536 600 aaPredicted RBP10.55□□□□□ -0.72
THBS3-211ENST00000541990 PARP10Q53GL7 1025 aa10.55□□□□□ -0.72
THBS3-211ENST00000541990 FMR1NBQ8N0W7 255 aaPredicted RBP10.55□□□□□ -0.72
THBS3-211ENST00000541990 GJB4Q9NTQ9 266 aa10.55□□□□□ -0.72
THBS3-211ENST00000541990 TRIM66O15016 1216 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 TADA3O75528 432 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 SERPINB2P05120 415 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 IGHMBP2P38935 993 aaKnown RBP10.54□□□□□ -0.72
THBS3-211ENST00000541990 GSDMDP57764 484 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 CCDC102BQ68D86 513 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 TTLL5Q6EMB2 1281 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 PRR5LQ6MZQ0 368 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 TRIM65Q6PJ69 517 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 TPTE2Q6XPS3 522 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 VGLL2Q8N8G2 317 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 ALDH8A1Q9H2A2 487 aaPredicted RBP10.54□□□□□ -0.72
THBS3-211ENST00000541990 ZSCAN16Q9H4T2 348 aaPredicted RBP10.54□□□□□ -0.72
THBS3-211ENST00000541990 PAG1Q9NWQ8 432 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 TAOK2Q9UL54 1235 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 CTAGE5O15320 804 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 URI1O94763 535 aaPredicted RBP10.54□□□□□ -0.72
THBS3-211ENST00000541990 TBC1D8O95759 1140 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 ATP5JP18859 108 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 OAS2P29728 719 aaKnown RBP10.54□□□□□ -0.72
THBS3-211ENST00000541990 NCAPHQ15003 741 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 WASHC4Q2M389 1173 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 SLC4A8Q2Y0W8 1093 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 RC3H1Q5TC82 1133 aaKnown RBP10.54□□□□□ -0.72
THBS3-211ENST00000541990 TMCO3Q6UWJ1 677 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 CNBD1Q8NA66 436 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 NLRP3Q96P20 1036 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 SDF4Q9BRK5 362 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 ZNF609O15014 1411 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 RIC1Q4ADV7 1423 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 CLEC4GQ6UXB4 293 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 KRBA2Q6ZNG9 492 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 UBXN4Q92575 508 aa10.54□□□□□ -0.72
THBS3-211ENST00000541990 PIH1D3Q9NQM4 214 aaKnown RBP10.54□□□□□ -0.72
THBS3-211ENST00000541990 GPHNQ9NQX3 736 aaPredicted RBP10.54□□□□□ -0.72
THBS3-211ENST00000541990 HAND2P61296 217 aa10.53□□□□□ -0.72
THBS3-211ENST00000541990 ETF1P62495 437 aaKnown RBP10.53□□□□□ -0.72
THBS3-211ENST00000541990 ANKRD18AQ8IVF6 992 aa10.53□□□□□ -0.72
THBS3-211ENST00000541990 HSD3B7Q9H2F3 369 aa10.53□□□□□ -0.72
THBS3-211ENST00000541990 PARP3Q9Y6F1 533 aa10.53□□□□□ -0.72
THBS3-211ENST00000541990 PSDA5PKW4 1024 aaPredicted RBP10.53□□□□□ -0.72
THBS3-211ENST00000541990 TMEM232C9JQI7 657 aa10.53□□□□□ -0.72
THBS3-211ENST00000541990 SMIM22K7EJ46 135 aa10.53□□□□□ -0.72
THBS3-211ENST00000541990 PDIA4P13667 645 aaKnown RBP10.53□□□□□ -0.72
THBS3-211ENST00000541990 TSGA10IPQ3SY00 556 aa10.53□□□□□ -0.72
THBS3-211ENST00000541990 CCDC158Q5M9N0 1113 aa10.53□□□□□ -0.72
THBS3-211ENST00000541990 RAB11FIP4Q86YS3 637 aa10.53□□□□□ -0.72
THBS3-211ENST00000541990 HAUS7Q99871 368 aa10.53□□□□□ -0.72
THBS3-211ENST00000541990 HMG20BQ9P0W2 317 aa10.53□□□□□ -0.72
THBS3-211ENST00000541990 ABCF2Q9UG63 623 aa10.53□□□□□ -0.72
THBS3-211ENST00000541990 MINPP1Q9UNW1 487 aa10.53□□□□□ -0.72
THBS3-211ENST00000541990 CLIC4Q9Y696 253 aa10.53□□□□□ -0.72
THBS3-211ENST00000541990 KIF2AO00139 706 aaPredicted RBP10.52□□□□□ -0.72
THBS3-211ENST00000541990 HIP1O00291 1037 aa10.52□□□□□ -0.72
THBS3-211ENST00000541990 POLR3DP05423 398 aaPredicted RBP10.52□□□□□ -0.72
THBS3-211ENST00000541990 MMP10P09238 476 aa10.52□□□□□ -0.72
THBS3-211ENST00000541990 TM4SF1P30408 202 aa10.52□□□□□ -0.72
THBS3-211ENST00000541990 EVCP57679 992 aa10.52□□□□□ -0.72
THBS3-211ENST00000541990 SLC20A2Q08357 652 aa10.52□□□□□ -0.72
THBS3-211ENST00000541990 RASGRF1Q13972 1273 aa10.52□□□□□ -0.72
THBS3-211ENST00000541990 CCDC150Q8NCX0 1101 aa10.52□□□□□ -0.72
THBS3-211ENST00000541990 MRPS27Q92552 414 aaKnown RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms