RNA–Protein interactions for RNA: ENST00000541347.5

CX3CR1-205, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-205ENST00000541347 ATP2B4P23634 1241 aa12.57□□□□□ -0.4
CX3CR1-205ENST00000541347 COL23A1Q86Y22 540 aaPredicted RBP12.57□□□□□ -0.4
CX3CR1-205ENST00000541347 DZIP1Q86YF9 867 aaKnown RBP12.57□□□□□ -0.4
CX3CR1-205ENST00000541347 WDR66Q8TBY9 1149 aa12.57□□□□□ -0.4
CX3CR1-205ENST00000541347 TSPY26PQ9H489 355 aa12.57□□□□□ -0.4
CX3CR1-205ENST00000541347 GOLGA8AA7E2F4 631 aa12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 CDKL5O76039 1030 aa12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 WTAPQ15007 396 aa12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 SART3Q15020 963 aaKnown RBP12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 FBXO18Q8NFZ0 1043 aa12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 PGBD1Q96JS3 809 aa12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 CRAMP1Q96RY5 1269 aa12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 NTRK3Q16288 839 aa12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 ESR2Q92731 530 aa12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 CRNKL1Q9BZJ0 848 aaKnown RBP12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 GJB4Q9NTQ9 266 aa12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 GGA1Q9UJY5 639 aa12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 ERICH2A1L162 156 aa12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 LIG1P18858 919 aa12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 CEBPZQ03701 1054 aaKnown RBP12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 CPLX2Q6PUV4 134 aaKnown RBP12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 FTOQ9C0B1 505 aaKnown RBP eCLIP12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 DCP1AQ9NPI6 582 aaPredicted RBP12.56□□□□□ -0.4
CX3CR1-205ENST00000541347 NID2Q14112 1375 aa12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 GOLGA6L4A6NEF3 574 aa12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 USP17L12C9JPN9 530 aa12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 USP17L21D6R901 530 aa12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 LDHBP07195 334 aaKnown RBP12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 ATL3Q6DD88 541 aa12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 SYNE3Q6ZMZ3 975 aa12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 NLGN1Q8N2Q7 840 aa12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 PHKBQ93100 1093 aa12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 PODXL2Q9NZ53 605 aa12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 RANBP6O60518 1105 aaKnown RBP12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 FGRP09769 529 aa12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 GRIK5Q16478 980 aa12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 TMTC2Q8N394 836 aa12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 ZNF396Q96N95 335 aaPredicted RBP12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 USP28Q96RU2 1077 aa12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 CD209Q9NNX6 404 aa12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 ATP8A2Q9NTI2 1148 aa12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 RCOR1Q9UKL0 485 aa12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 DUOX1Q9NRD9 1551 aa12.55□□□□□ -0.4
CX3CR1-205ENST00000541347 IGSF3O75054 1194 aa12.54□□□□□ -0.4
CX3CR1-205ENST00000541347 EVX2Q03828 476 aa12.54□□□□□ -0.4
CX3CR1-205ENST00000541347 RGS22Q8NE09 1264 aa12.54□□□□□ -0.4
CX3CR1-205ENST00000541347 AIFM3Q96NN9 605 aa12.54□□□□□ -0.4
CX3CR1-205ENST00000541347 UBAC1Q9BSL1 405 aa12.54□□□□□ -0.4
CX3CR1-205ENST00000541347 ALG1Q9BT22 464 aa12.54□□□□□ -0.4
CX3CR1-205ENST00000541347 POLLQ9UGP5 575 aa12.54□□□□□ -0.4
CX3CR1-205ENST00000541347 MYH15Q9Y2K3 1946 aa12.54□□□□□ -0.4
CX3CR1-205ENST00000541347 PCP11498 1178 aaKnown RBP12.54□□□□□ -0.4
CX3CR1-205ENST00000541347 RXRBP28702 533 aa12.54□□□□□ -0.4
CX3CR1-205ENST00000541347 SEC23AQ15436 765 aa12.54□□□□□ -0.4
CX3CR1-205ENST00000541347 TBC1D16Q8TBP0 767 aa12.54□□□□□ -0.4
CX3CR1-205ENST00000541347 BAZ2AQ9UIF9 1905 aaKnown RBP12.54□□□□□ -0.4
CX3CR1-205ENST00000541347 CCDC88AQ3V6T2 1871 aa12.54□□□□□ -0.4
CX3CR1-205ENST00000541347 IL1R1P14778 569 aa12.54□□□□□ -0.4
CX3CR1-205ENST00000541347 IARSP41252 1262 aaKnown RBP12.54□□□□□ -0.4
CX3CR1-205ENST00000541347 RNF214Q8ND24 703 aa12.54□□□□□ -0.4
CX3CR1-205ENST00000541347 TNKSO95271 1327 aa12.53□□□□□ -0.4
CX3CR1-205ENST00000541347 PRDM1O75626 825 aa12.53□□□□□ -0.4
CX3CR1-205ENST00000541347 ANP32BQ92688 251 aaKnown RBP12.53□□□□□ -0.4
CX3CR1-205ENST00000541347 KIF28PB7ZC32 967 aa12.53□□□□□ -0.4
CX3CR1-205ENST00000541347 PPEF1O14829 653 aaPredicted RBP12.53□□□□□ -0.4
CX3CR1-205ENST00000541347 CCDC173Q0VFZ6 552 aa12.53□□□□□ -0.4
CX3CR1-205ENST00000541347 KLHL34Q8N239 644 aa12.53□□□□□ -0.4
CX3CR1-205ENST00000541347 PPP1R9BQ96SB3 815 aa12.53□□□□□ -0.4
CX3CR1-205ENST00000541347 ZSCAN10Q96SZ4 725 aaPredicted RBP12.53□□□□□ -0.4
CX3CR1-205ENST00000541347 ARPP21Q9UBL0 812 aaPredicted RBP12.53□□□□□ -0.4
CX3CR1-205ENST00000541347 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.53□□□□□ -0.4
CX3CR1-205ENST00000541347 KIAA1551Q9HCM1 1747 aa12.53□□□□□ -0.4
CX3CR1-205ENST00000541347 FMNL1O95466 1100 aaPredicted RBP12.52□□□□□ -0.4
CX3CR1-205ENST00000541347 CYP2D6P10635 497 aa12.52□□□□□ -0.4
CX3CR1-205ENST00000541347 GSTO1P78417 241 aa12.52□□□□□ -0.4
CX3CR1-205ENST00000541347 KIF23Q02241 960 aaPredicted RBP12.52□□□□□ -0.4
CX3CR1-205ENST00000541347 DIXDC1Q155Q3 683 aa12.52□□□□□ -0.4
CX3CR1-205ENST00000541347 RTN1Q16799 776 aa12.52□□□□□ -0.4
CX3CR1-205ENST00000541347 SBK1Q52WX2 424 aa12.52□□□□□ -0.4
CX3CR1-205ENST00000541347 SP8Q8IXZ3 490 aa12.52□□□□□ -0.4
CX3CR1-205ENST00000541347 ZNF654Q8IZM8 581 aa12.52□□□□□ -0.4
CX3CR1-205ENST00000541347 BICD2Q8TD16 824 aa12.52□□□□□ -0.4
CX3CR1-205ENST00000541347 FUCA2Q9BTY2 467 aa12.52□□□□□ -0.4
CX3CR1-205ENST00000541347 DACT1Q9NYF0 836 aa12.52□□□□□ -0.4
CX3CR1-205ENST00000541347 STK36Q9NRP7 1315 aa12.52□□□□□ -0.4
CX3CR1-205ENST00000541347 POLR3DP05423 398 aaPredicted RBP12.52□□□□□ -0.41
CX3CR1-205ENST00000541347 IFNAR1P17181 557 aa12.52□□□□□ -0.41
CX3CR1-205ENST00000541347 RCAN1P53805 252 aa12.52□□□□□ -0.41
CX3CR1-205ENST00000541347 SSRP1Q08945 709 aaKnown RBP12.52□□□□□ -0.41
CX3CR1-205ENST00000541347 TMC4Q7Z404 712 aa12.52□□□□□ -0.41
CX3CR1-205ENST00000541347 BRAPQ7Z569 592 aa12.52□□□□□ -0.41
CX3CR1-205ENST00000541347 ENAHQ8N8S7 591 aaPredicted RBP12.52□□□□□ -0.41
CX3CR1-205ENST00000541347 FLAD1Q8NFF5 587 aa12.52□□□□□ -0.41
CX3CR1-205ENST00000541347 SLC26A6Q9BXS9 759 aa12.52□□□□□ -0.41
CX3CR1-205ENST00000541347 ANKRD31Q8N7Z5 1873 aa12.52□□□□□ -0.41
CX3CR1-205ENST00000541347 NRXN2Q9P2S2 1712 aa12.52□□□□□ -0.41
CX3CR1-205ENST00000541347 UBE2Q2LH0YL09 131 aa12.52□□□□□ -0.41
CX3CR1-205ENST00000541347 SRGNP10124 158 aa12.52□□□□□ -0.41
CX3CR1-205ENST00000541347 SH3RF3Q8TEJ3 882 aaPredicted RBP12.52□□□□□ -0.41
CX3CR1-205ENST00000541347 NUP62CLQ9H1M0 184 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms