RNA–Protein interactions for RNA: ENST00000538426.5

OTUB1-209, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OTUB1, Length 1,729 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-209ENST00000538426 JDP2Q8WYK2 163 aa24.23■■□□□ 1.47
OTUB1-209ENST00000538426 PCDHAC2Q9Y5I4 1007 aa24.23■■□□□ 1.47
OTUB1-209ENST00000538426 RBM5P52756 815 aaKnown RBP eCLIP24.22■■□□□ 1.47
OTUB1-209ENST00000538426 FGD1P98174 961 aa24.22■■□□□ 1.47
OTUB1-209ENST00000538426 RSBN1LQ6PCB5 846 aaPredicted RBP24.22■■□□□ 1.47
OTUB1-209ENST00000538426 SYT17Q9BSW7 474 aa24.22■■□□□ 1.47
OTUB1-209ENST00000538426 ALDH8A1Q9H2A2 487 aaPredicted RBP24.22■■□□□ 1.47
OTUB1-209ENST00000538426 B4E1Z4 1266 aa24.21■■□□□ 1.47
OTUB1-209ENST00000538426 LARGE1O95461 756 aa24.21■■□□□ 1.47
OTUB1-209ENST00000538426 VIL1P09327 827 aaKnown RBP24.21■■□□□ 1.47
OTUB1-209ENST00000538426 PRELPP51888 382 aa24.21■■□□□ 1.47
OTUB1-209ENST00000538426 MFSD6Q6ZSS7 791 aa24.21■■□□□ 1.47
OTUB1-209ENST00000538426 TOMM22Q9NS69 142 aa24.21■■□□□ 1.47
OTUB1-209ENST00000538426 USP40Q9NVE5 1235 aa24.21■■□□□ 1.47
OTUB1-209ENST00000538426 MKRN1Q9UHC7 482 aaKnown RBP24.21■■□□□ 1.47
OTUB1-209ENST00000538426 ZBTB12Q9Y330 459 aaPredicted RBP24.21■■□□□ 1.47
OTUB1-209ENST00000538426 TIAM2Q8IVF5 1701 aa24.21■■□□□ 1.47
OTUB1-209ENST00000538426 LTBP3Q9NS15 1303 aa24.21■■□□□ 1.47
OTUB1-209ENST00000538426 CXCL9Q07325 125 aa24.21■■□□□ 1.47
OTUB1-209ENST00000538426 ANKRD1Q15327 319 aa24.21■■□□□ 1.47
OTUB1-209ENST00000538426 RRP12Q5JTH9 1297 aaKnown RBP24.21■■□□□ 1.47
OTUB1-209ENST00000538426 APOBEC3HQ6NTF7 200 aaKnown RBP24.21■■□□□ 1.47
OTUB1-209ENST00000538426 STAG1Q8WVM7 1258 aa24.21■■□□□ 1.47
OTUB1-209ENST00000538426 ARPP21Q9UBL0 812 aaPredicted RBP24.21■■□□□ 1.47
OTUB1-209ENST00000538426 SAP30BPQ9UHR5 308 aaKnown RBP24.21■■□□□ 1.47
OTUB1-209ENST00000538426 ANAPC4Q9UJX5 808 aa24.21■■□□□ 1.47
OTUB1-209ENST00000538426 TPCN1Q9ULQ1 816 aa24.21■■□□□ 1.47
OTUB1-209ENST00000538426 NAV1Q8NEY1 1877 aa24.2■■□□□ 1.46
OTUB1-209ENST00000538426 PRC1O43663 620 aa24.2■■□□□ 1.46
OTUB1-209ENST00000538426 MCM5P33992 734 aa24.2■■□□□ 1.46
OTUB1-209ENST00000538426 ARHGAP27Q6ZUM4 889 aa24.2■■□□□ 1.46
OTUB1-209ENST00000538426 LAMB1P07942 1786 aa24.19■■□□□ 1.46
OTUB1-209ENST00000538426 ANTXR2P58335 489 aa24.19■■□□□ 1.46
OTUB1-209ENST00000538426 CYB5R4Q7L1T6 521 aa24.19■■□□□ 1.46
OTUB1-209ENST00000538426 BRF1Q92994 677 aa24.19■■□□□ 1.46
OTUB1-209ENST00000538426 ZDHHC15Q96MV8 337 aa24.19■■□□□ 1.46
OTUB1-209ENST00000538426 MRIQ9BWK5 157 aa24.19■■□□□ 1.46
OTUB1-209ENST00000538426 PICALMQ13492 652 aa24.18■■□□□ 1.46
OTUB1-209ENST00000538426 SBK1Q52WX2 424 aa24.18■■□□□ 1.46
OTUB1-209ENST00000538426 CDC42EP5Q6NZY7 148 aa24.18■■□□□ 1.46
OTUB1-209ENST00000538426 GPHNQ9NQX3 736 aaPredicted RBP24.18■■□□□ 1.46
OTUB1-209ENST00000538426 FLT1P17948 1338 aa24.18■■□□□ 1.46
OTUB1-209ENST00000538426 MYO3BQ8WXR4 1341 aa24.18■■□□□ 1.46
OTUB1-209ENST00000538426 KDM4AO75164 1064 aa24.18■■□□□ 1.46
OTUB1-209ENST00000538426 HDLBPQ00341 1268 aaKnown RBP24.18■■□□□ 1.46
OTUB1-209ENST00000538426 ME3Q16798 604 aa24.18■■□□□ 1.46
OTUB1-209ENST00000538426 CIAPIN1Q6FI81 312 aa24.18■■□□□ 1.46
OTUB1-209ENST00000538426 RNF41Q9H4P4 317 aaPredicted RBP24.18■■□□□ 1.46
OTUB1-209ENST00000538426 SERPINA10Q9UK55 444 aa24.18■■□□□ 1.46
OTUB1-209ENST00000538426 CUL4AQ13619 759 aa24.17■■□□□ 1.46
OTUB1-209ENST00000538426 ZSCAN31Q96LW9 406 aaPredicted RBP24.17■■□□□ 1.46
OTUB1-209ENST00000538426 GMLQ99445 158 aa24.17■■□□□ 1.46
OTUB1-209ENST00000538426 KRT23Q9C075 422 aa24.17■■□□□ 1.46
OTUB1-209ENST00000538426 CNNM2Q9H8M5 875 aa24.17■■□□□ 1.46
OTUB1-209ENST00000538426 PRDM1O75626 825 aa24.16■■□□□ 1.46
OTUB1-209ENST00000538426 POLR3DP05423 398 aaPredicted RBP24.16■■□□□ 1.46
OTUB1-209ENST00000538426 CFAP100Q494V2 611 aa24.16■■□□□ 1.46
OTUB1-209ENST00000538426 NECAB1Q8N987 351 aa24.16■■□□□ 1.46
OTUB1-209ENST00000538426 ZSWIM5Q9P217 1185 aa24.16■■□□□ 1.46
OTUB1-209ENST00000538426 FOCADQ5VW36 1801 aa24.16■■□□□ 1.46
OTUB1-209ENST00000538426 WDHD1O75717 1129 aaPredicted RBP24.15■■□□□ 1.46
OTUB1-209ENST00000538426 APOBRQ0VD83 1088 aa24.15■■□□□ 1.46
OTUB1-209ENST00000538426 STK3Q13188 491 aa24.15■■□□□ 1.46
OTUB1-209ENST00000538426 C12orf60Q5U649 245 aa24.15■■□□□ 1.46
OTUB1-209ENST00000538426 DDX4Q9NQI0 724 aaKnown RBP24.15■■□□□ 1.46
OTUB1-209ENST00000538426 CACNB3P54284 484 aa24.15■■□□□ 1.46
OTUB1-209ENST00000538426 AMOTL1Q8IY63 956 aa24.15■■□□□ 1.46
OTUB1-209ENST00000538426 MYH1P12882 1939 aa24.14■■□□□ 1.46
OTUB1-209ENST00000538426 ECM29Q5VYK3 1845 aa24.14■■□□□ 1.46
OTUB1-209ENST00000538426 PLCD1P51178 756 aa24.14■■□□□ 1.45
OTUB1-209ENST00000538426 CCDC83Q8IWF9 413 aa24.14■■□□□ 1.45
OTUB1-209ENST00000538426 DYNLL2Q96FJ2 89 aa24.14■■□□□ 1.45
OTUB1-209ENST00000538426 SH2B1Q9NRF2 756 aaPredicted RBP24.14■■□□□ 1.45
OTUB1-209ENST00000538426 SLC3A2P08195 630 aaKnown RBP24.13■■□□□ 1.45
OTUB1-209ENST00000538426 TNIP1Q15025 636 aa24.13■■□□□ 1.45
OTUB1-209ENST00000538426 AGBL3Q8NEM8 1001 aa24.13■■□□□ 1.45
OTUB1-209ENST00000538426 PRMT6Q96LA8 375 aaPredicted RBP24.13■■□□□ 1.45
OTUB1-209ENST00000538426 AGXT2Q9BYV1 514 aa24.13■■□□□ 1.45
OTUB1-209ENST00000538426 HDAC9Q9UKV0 1011 aa24.13■■□□□ 1.45
OTUB1-209ENST00000538426 NAP1L2Q9ULW6 460 aaPredicted RBP24.13■■□□□ 1.45
OTUB1-209ENST00000538426 WDR19Q8NEZ3 1342 aa24.13■■□□□ 1.45
OTUB1-209ENST00000538426 DTNBO60941 627 aa24.13■■□□□ 1.45
OTUB1-209ENST00000538426 NFIAQ12857 509 aa24.13■■□□□ 1.45
OTUB1-209ENST00000538426 OGFOD1Q8N543 542 aa24.13■■□□□ 1.45
OTUB1-209ENST00000538426 ZKSCAN3Q9BRR0 538 aa24.13■■□□□ 1.45
OTUB1-209ENST00000538426 TDRD3Q9H7E2 651 aaKnown RBP24.13■■□□□ 1.45
OTUB1-209ENST00000538426 DDX60LQ5H9U9 1706 aaKnown RBP24.12■■□□□ 1.45
OTUB1-209ENST00000538426 ST3GAL1Q11201 340 aa24.12■■□□□ 1.45
OTUB1-209ENST00000538426 ESR2Q92731 530 aa24.12■■□□□ 1.45
OTUB1-209ENST00000538426 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.12■■□□□ 1.45
OTUB1-209ENST00000538426 RANBP6O60518 1105 aaKnown RBP24.11■■□□□ 1.45
OTUB1-209ENST00000538426 FGRP09769 529 aa24.11■■□□□ 1.45
OTUB1-209ENST00000538426 YBX3P16989 372 aaKnown RBP eCLIP24.11■■□□□ 1.45
OTUB1-209ENST00000538426 DDIT3P35638 169 aa24.11■■□□□ 1.45
OTUB1-209ENST00000538426 EIF6P56537 245 aaKnown RBP24.11■■□□□ 1.45
OTUB1-209ENST00000538426 GJA3Q9Y6H8 435 aa24.11■■□□□ 1.45
OTUB1-209ENST00000538426 FZD9O00144 591 aa24.1■■□□□ 1.45
OTUB1-209ENST00000538426 SH2B2O14492 632 aaPredicted RBP24.1■■□□□ 1.45
OTUB1-209ENST00000538426 PDE4BQ07343 736 aa24.1■■□□□ 1.45
OTUB1-209ENST00000538426 SHTN1A0MZ66 631 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms