RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 BRAPQ7Z569 592 aa10.79□□□□□ -0.68
DDB1-211ENST00000538280 NKX2-3Q8TAU0 364 aa10.79□□□□□ -0.68
DDB1-211ENST00000538280 MTA3Q9BTC8 594 aa10.79□□□□□ -0.68
DDB1-211ENST00000538280 GOLPH3LQ9H4A5 285 aa10.79□□□□□ -0.68
DDB1-211ENST00000538280 CBX8Q9HC52 389 aa10.79□□□□□ -0.68
DDB1-211ENST00000538280 SEC31BQ9NQW1 1179 aa10.79□□□□□ -0.68
DDB1-211ENST00000538280 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.79□□□□□ -0.68
DDB1-211ENST00000538280 ANGEL1Q9UNK9 670 aaKnown RBP10.79□□□□□ -0.68
DDB1-211ENST00000538280 NEDD4P46934 1319 aa10.79□□□□□ -0.68
DDB1-211ENST00000538280 STK36Q9NRP7 1315 aa10.79□□□□□ -0.68
DDB1-211ENST00000538280 SLX4Q8IY92 1834 aa10.79□□□□□ -0.68
DDB1-211ENST00000538280 POTECB2RU33 542 aa10.78□□□□□ -0.68
DDB1-211ENST00000538280 PTMAP06454 111 aaKnown RBP10.78□□□□□ -0.68
DDB1-211ENST00000538280 TPM3P06753 285 aa10.78□□□□□ -0.68
DDB1-211ENST00000538280 IGHMBP2P38935 993 aaKnown RBP10.78□□□□□ -0.68
DDB1-211ENST00000538280 FAM160A1Q05DH4 1040 aa10.78□□□□□ -0.68
DDB1-211ENST00000538280 MAP3K12Q12852 859 aa10.78□□□□□ -0.68
DDB1-211ENST00000538280 TRDNQ13061 729 aa10.78□□□□□ -0.68
DDB1-211ENST00000538280 SNW1Q13573 536 aaKnown RBP10.78□□□□□ -0.68
DDB1-211ENST00000538280 SF3B3Q15393 1217 aaKnown RBP10.78□□□□□ -0.68
DDB1-211ENST00000538280 CAMK4Q16566 473 aa10.78□□□□□ -0.68
DDB1-211ENST00000538280 TPRNQ4KMQ1 711 aa10.78□□□□□ -0.68
DDB1-211ENST00000538280 ANO6Q4KMQ2 910 aa10.78□□□□□ -0.68
DDB1-211ENST00000538280 CCAR1Q8IX12 1150 aaKnown RBP10.78□□□□□ -0.68
DDB1-211ENST00000538280 IFNL3Q8IZI9 196 aa10.78□□□□□ -0.68
DDB1-211ENST00000538280 HELBQ8NG08 1087 aaPredicted RBP10.78□□□□□ -0.68
DDB1-211ENST00000538280 IGDCC4Q8TDY8 1250 aa10.78□□□□□ -0.68
DDB1-211ENST00000538280 PIBF1Q8WXW3 757 aa10.78□□□□□ -0.68
DDB1-211ENST00000538280 C8orf76Q96K31 380 aa10.78□□□□□ -0.68
DDB1-211ENST00000538280 MPHOSPH8Q99549 860 aa10.78□□□□□ -0.68
DDB1-211ENST00000538280 FTOQ9C0B1 505 aaKnown RBP eCLIP10.78□□□□□ -0.68
DDB1-211ENST00000538280 POLR3EQ9NVU0 708 aa10.78□□□□□ -0.68
DDB1-211ENST00000538280 ORC3Q9UBD5 711 aaPredicted RBP10.78□□□□□ -0.68
DDB1-211ENST00000538280 DENND2AQ9ULE3 1009 aa10.78□□□□□ -0.68
DDB1-211ENST00000538280 TACC3Q9Y6A5 838 aa10.78□□□□□ -0.68
DDB1-211ENST00000538280 COL1A1P02452 1464 aaPredicted RBP10.77□□□□□ -0.69
DDB1-211ENST00000538280 GSG1L2A8MUP6 293 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 MBD4O95243 580 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 HSPA1AP0DMV8 641 aaKnown RBP10.77□□□□□ -0.69
DDB1-211ENST00000538280 HSPA1BP0DMV9 641 aaKnown RBP10.77□□□□□ -0.69
DDB1-211ENST00000538280 GNAT2P19087 354 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 LIFRP42702 1097 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 FOSBP53539 338 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 KIF23Q02241 960 aaPredicted RBP10.77□□□□□ -0.69
DDB1-211ENST00000538280 CHRNDQ07001 517 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 KIAA2012Q0VF49 1180 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 NTRK3Q16288 839 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 MYSM1Q5VVJ2 828 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 ADALQ6DHV7 355 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 APOA5Q6Q788 366 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 SASS6Q6UVJ0 657 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.77□□□□□ -0.69
DDB1-211ENST00000538280 PLA2G4DQ86XP0 818 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 CKAP2LQ8IYA6 745 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 TNS4Q8IZW8 715 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 LINC00301Q8NCQ3 95 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 SMC1BQ8NDV3 1235 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 AIDAQ96BJ3 306 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 CDC5LQ99459 802 aaKnown RBP10.77□□□□□ -0.69
DDB1-211ENST00000538280 LY9Q9HBG7 655 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 NIP7Q9Y221 180 aaKnown RBP eCLIP10.77□□□□□ -0.69
DDB1-211ENST00000538280 ZNF652Q9Y2D9 606 aa10.77□□□□□ -0.69
DDB1-211ENST00000538280 LAMB1P07942 1786 aa10.76□□□□□ -0.69
DDB1-211ENST00000538280 B4E1Z4 1266 aa10.76□□□□□ -0.69
DDB1-211ENST00000538280 KIF28PB7ZC32 967 aa10.76□□□□□ -0.69
DDB1-211ENST00000538280 CDKL5O76039 1030 aa10.76□□□□□ -0.69
DDB1-211ENST00000538280 RCAN1P53805 252 aa10.76□□□□□ -0.69
DDB1-211ENST00000538280 GUCY1B3Q02153 619 aa10.76□□□□□ -0.69
DDB1-211ENST00000538280 IQCB1Q15051 598 aa10.76□□□□□ -0.69
DDB1-211ENST00000538280 SLC10A5Q5PT55 438 aa10.76□□□□□ -0.69
DDB1-211ENST00000538280 SARM1Q6SZW1 724 aa10.76□□□□□ -0.69
DDB1-211ENST00000538280 CCDC73Q6ZRK6 1079 aa10.76□□□□□ -0.69
DDB1-211ENST00000538280 FMR1NBQ8N0W7 255 aaPredicted RBP10.76□□□□□ -0.69
DDB1-211ENST00000538280 CCDC24Q8N4L8 307 aa10.76□□□□□ -0.69
DDB1-211ENST00000538280 MAGEB6Q8N7X4 407 aa10.76□□□□□ -0.69
DDB1-211ENST00000538280 STAG1Q8WVM7 1258 aa10.76□□□□□ -0.69
DDB1-211ENST00000538280 MRPS27Q92552 414 aaKnown RBP10.76□□□□□ -0.69
DDB1-211ENST00000538280 CNNM2Q9H8M5 875 aa10.76□□□□□ -0.69
DDB1-211ENST00000538280 FAM217BQ9NTX9 383 aaPredicted RBP10.76□□□□□ -0.69
DDB1-211ENST00000538280 SPTLC3Q9NUV7 552 aa10.76□□□□□ -0.69
DDB1-211ENST00000538280 NAP1L2Q9ULW6 460 aaPredicted RBP10.76□□□□□ -0.69
DDB1-211ENST00000538280 PCDHA7Q9UN72 937 aa10.76□□□□□ -0.69
DDB1-211ENST00000538280 DUOX1Q9NRD9 1551 aa10.76□□□□□ -0.69
DDB1-211ENST00000538280 FAM237AA0A1B0GTK4 181 aa10.75□□□□□ -0.69
DDB1-211ENST00000538280 SNAP23O00161 211 aa10.75□□□□□ -0.69
DDB1-211ENST00000538280 POTEIP0CG38 1075 aa10.75□□□□□ -0.69
DDB1-211ENST00000538280 POTEJP0CG39 1038 aa10.75□□□□□ -0.69
DDB1-211ENST00000538280 CDC25BP30305 580 aa10.75□□□□□ -0.69
DDB1-211ENST00000538280 METAP2P50579 478 aaKnown RBP eCLIP10.75□□□□□ -0.696e-8■□□□□ 10.7
DDB1-211ENST00000538280 UBE4AQ14139 1066 aa10.75□□□□□ -0.69
DDB1-211ENST00000538280 STX1AQ16623 288 aa10.75□□□□□ -0.69
DDB1-211ENST00000538280 AKNAD1Q5T1N1 836 aa10.75□□□□□ -0.69
DDB1-211ENST00000538280 LUZP1Q86V48 1076 aa10.75□□□□□ -0.69
DDB1-211ENST00000538280 FSIP1Q8NA03 581 aa10.75□□□□□ -0.69
DDB1-211ENST00000538280 KCNG4Q8TDN1 519 aa10.75□□□□□ -0.69
DDB1-211ENST00000538280 KRT23Q9C075 422 aa10.75□□□□□ -0.69
DDB1-211ENST00000538280 NAPBQ9H115 298 aa10.75□□□□□ -0.69
DDB1-211ENST00000538280 ARMT1Q9H993 441 aa10.75□□□□□ -0.69
DDB1-211ENST00000538280 NARFQ9UHQ1 456 aa10.75□□□□□ -0.69
DDB1-211ENST00000538280 ANAPC4Q9UJX5 808 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms