RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 MEI1Q5TIA1 1274 aa9.25□□□□□ -0.93
CLIP1-207ENST00000536634 CDPF1Q6NVV7 123 aa9.25□□□□□ -0.93
CLIP1-207ENST00000536634 BEND4Q6ZU67 534 aa9.25□□□□□ -0.93
CLIP1-207ENST00000536634 TRIM42Q8IWZ5 723 aa9.25□□□□□ -0.93
CLIP1-207ENST00000536634 GRIN3AQ8TCU5 1115 aa9.25□□□□□ -0.93
CLIP1-207ENST00000536634 BCL2L13Q9BXK5 485 aa9.25□□□□□ -0.93
CLIP1-207ENST00000536634 PPP1R9AQ9ULJ8 1098 aa9.25□□□□□ -0.93
CLIP1-207ENST00000536634 AP4E1Q9UPM8 1137 aa9.25□□□□□ -0.93
CLIP1-207ENST00000536634 HIF3AQ9Y2N7 669 aa9.25□□□□□ -0.93
CLIP1-207ENST00000536634 GRIN2AQ12879 1464 aa9.25□□□□□ -0.93
CLIP1-207ENST00000536634 SHROOM2Q13796 1616 aa9.24□□□□□ -0.93
CLIP1-207ENST00000536634 CTSHP09668 335 aa9.24□□□□□ -0.93
CLIP1-207ENST00000536634 MAP4P27816 1152 aaKnown RBP9.24□□□□□ -0.93
CLIP1-207ENST00000536634 MAP1SQ66K74 1059 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-207ENST00000536634 CBX8Q9HC52 389 aa9.24□□□□□ -0.93
CLIP1-207ENST00000536634 KRT82Q9NSB4 513 aa9.24□□□□□ -0.93
CLIP1-207ENST00000536634 FAM105AQ9NUU6 356 aa9.24□□□□□ -0.93
CLIP1-207ENST00000536634 NUP160Q12769 1436 aa9.23□□□□□ -0.93
CLIP1-207ENST00000536634 ABCA10Q8WWZ4 1543 aa9.23□□□□□ -0.93
CLIP1-207ENST00000536634 KIF4BQ2VIQ3 1234 aa9.23□□□□□ -0.93
CLIP1-207ENST00000536634 DYMQ7RTS9 669 aa9.23□□□□□ -0.93
CLIP1-207ENST00000536634 GIPC2Q8TF65 315 aa9.23□□□□□ -0.93
CLIP1-207ENST00000536634 FBLIM1Q8WUP2 373 aa9.23□□□□□ -0.93
CLIP1-207ENST00000536634 FAM83CQ9BQN1 747 aa9.23□□□□□ -0.93
CLIP1-207ENST00000536634 PCDHGC5Q9Y5F6 944 aa9.23□□□□□ -0.93
CLIP1-207ENST00000536634 ADAMTS12P58397 1594 aa9.23□□□□□ -0.93
CLIP1-207ENST00000536634 TMPRSS2O15393 492 aa9.22□□□□□ -0.93
CLIP1-207ENST00000536634 USP11P51784 963 aa9.22□□□□□ -0.93
CLIP1-207ENST00000536634 LCE3BQ5TA77 95 aa9.22□□□□□ -0.93
CLIP1-207ENST00000536634 PCNX4Q63HM2 1172 aa9.22□□□□□ -0.93
CLIP1-207ENST00000536634 CLEC10AQ8IUN9 316 aa9.22□□□□□ -0.93
CLIP1-207ENST00000536634 GPBAR1Q8TDU6 330 aa9.22□□□□□ -0.93
CLIP1-207ENST00000536634 EMILIN2Q9BXX0 1053 aa9.22□□□□□ -0.93
CLIP1-207ENST00000536634 RXRBP28702 533 aa9.21□□□□□ -0.94
CLIP1-207ENST00000536634 CCDC85BQ15834 202 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-207ENST00000536634 SV2BQ7L1I2 683 aa9.21□□□□□ -0.94
CLIP1-207ENST00000536634 GSX1Q9H4S2 264 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-207ENST00000536634 CACNA2D2Q9NY47 1150 aa9.21□□□□□ -0.94
CLIP1-207ENST00000536634 SYNGAP1Q96PV0 1343 aa9.21□□□□□ -0.94
CLIP1-207ENST00000536634 SORBS3O60504 671 aa9.2□□□□□ -0.94
CLIP1-207ENST00000536634 RAB6AP20340 208 aa9.2□□□□□ -0.94
CLIP1-207ENST00000536634 CRIM1Q9NZV1 1036 aa9.2□□□□□ -0.94
CLIP1-207ENST00000536634 SAMM50Q9Y512 469 aa9.2□□□□□ -0.94
CLIP1-207ENST00000536634 IGLV1-40P01703 118 aa9.19□□□□□ -0.94
CLIP1-207ENST00000536634 ASPAP45381 313 aa9.19□□□□□ -0.94
CLIP1-207ENST00000536634 ID3Q02535 119 aa9.19□□□□□ -0.94
CLIP1-207ENST00000536634 NFIAQ12857 509 aa9.19□□□□□ -0.94
CLIP1-207ENST00000536634 RNF43Q68DV7 783 aa9.19□□□□□ -0.94
CLIP1-207ENST00000536634 LLGL2Q6P1M3 1020 aa9.19□□□□□ -0.94
CLIP1-207ENST00000536634 ACSS3Q9H6R3 686 aa9.19□□□□□ -0.94
CLIP1-207ENST00000536634 MRS2Q9HD23 443 aa9.19□□□□□ -0.94
CLIP1-207ENST00000536634 VTI1BQ9UEU0 232 aa9.19□□□□□ -0.94
CLIP1-207ENST00000536634 ABCC10Q5T3U5 1492 aa9.19□□□□□ -0.94
CLIP1-207ENST00000536634 FAM95CA0A1B0GW59 222 aa9.18□□□□□ -0.94
CLIP1-207ENST00000536634 NFICP08651 508 aa9.18□□□□□ -0.94
CLIP1-207ENST00000536634 SLFN14P0C7P3 912 aa9.18□□□□□ -0.94
CLIP1-207ENST00000536634 MAP3K11Q16584 847 aa9.18□□□□□ -0.94
CLIP1-207ENST00000536634 TTBK2Q6IQ55 1244 aa9.18□□□□□ -0.94
CLIP1-207ENST00000536634 EZH1Q92800 747 aaPredicted RBP9.18□□□□□ -0.94
CLIP1-207ENST00000536634 FANCD2OSQ96PS1 177 aa9.18□□□□□ -0.94
CLIP1-207ENST00000536634 SEMA6CQ9H3T2 930 aa9.18□□□□□ -0.94
CLIP1-207ENST00000536634 DISC1Q9NRI5 854 aa9.18□□□□□ -0.94
CLIP1-207ENST00000536634 DIP2BQ9P265 1576 aa9.18□□□□□ -0.94
CLIP1-207ENST00000536634 TRIM37O94972 964 aa9.17□□□□□ -0.94
CLIP1-207ENST00000536634 TAF1CQ15572 869 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-207ENST00000536634 NFKBIBQ15653 356 aa9.17□□□□□ -0.94
CLIP1-207ENST00000536634 ZC3H12AQ5D1E8 599 aaKnown RBP9.17□□□□□ -0.94
CLIP1-207ENST00000536634 SHISA5Q8N114 240 aa9.17□□□□□ -0.94
CLIP1-207ENST00000536634 ACSBG1Q96GR2 724 aa9.17□□□□□ -0.94
CLIP1-207ENST00000536634 CRELD1Q96HD1 420 aa9.17□□□□□ -0.94
CLIP1-207ENST00000536634 KRTAP4-12Q9BQ66 201 aa9.17□□□□□ -0.94
CLIP1-207ENST00000536634 KDM6BO15054 1643 aa9.16□□□□□ -0.94
CLIP1-207ENST00000536634 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-207ENST00000536634 ST13P50502 369 aaKnown RBP9.16□□□□□ -0.94
CLIP1-207ENST00000536634 PTPN11Q06124 597 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-207ENST00000536634 LRRC14Q15048 493 aa9.16□□□□□ -0.94
CLIP1-207ENST00000536634 ZMYM1Q5SVZ6 1142 aa9.16□□□□□ -0.94
CLIP1-207ENST00000536634 MFSD14AQ96MC6 490 aa9.16□□□□□ -0.94
CLIP1-207ENST00000536634 DBNDD2Q9BQY9 259 aa9.16□□□□□ -0.94
CLIP1-207ENST00000536634 CYP8B1Q9UNU6 501 aa9.16□□□□□ -0.94
CLIP1-207ENST00000536634 PRG4Q92954 1404 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-207ENST00000536634 USP31Q70CQ4 1352 aa9.15□□□□□ -0.94
CLIP1-207ENST00000536634 GSC2O15499 205 aa9.15□□□□□ -0.94
CLIP1-207ENST00000536634 DYNC1LI2O43237 492 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-207ENST00000536634 ZNF16P17020 682 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-207ENST00000536634 ZNF326Q5BKZ1 582 aaKnown RBP9.15□□□□□ -0.94
CLIP1-207ENST00000536634 PAOXQ6QHF9 649 aa9.15□□□□□ -0.94
CLIP1-207ENST00000536634 GAL3ST3Q96A11 431 aa9.15□□□□□ -0.94
CLIP1-207ENST00000536634 YIPF2Q9BWQ6 316 aa9.15□□□□□ -0.94
CLIP1-207ENST00000536634 ATXN3LQ9H3M9 355 aa9.15□□□□□ -0.94
CLIP1-207ENST00000536634 LGR6Q9HBX8 967 aa9.15□□□□□ -0.94
CLIP1-207ENST00000536634 MAPKBP1O60336 1514 aa9.15□□□□□ -0.95
CLIP1-207ENST00000536634 ADCY10Q96PN6 1610 aa9.14□□□□□ -0.95
CLIP1-207ENST00000536634 NEFMP07197 916 aa9.14□□□□□ -0.95
CLIP1-207ENST00000536634 HNRNPUQ00839 825 aaKnown RBP eCLIP9.14□□□□□ -0.95
CLIP1-207ENST00000536634 TTLL4Q14679 1199 aa9.14□□□□□ -0.95
CLIP1-207ENST00000536634 ZDHHC13Q8IUH4 622 aa9.14□□□□□ -0.95
CLIP1-207ENST00000536634 PRKAG2Q9UGJ0 569 aa9.14□□□□□ -0.95
CLIP1-207ENST00000536634 PCDHA4Q9UN74 947 aa9.14□□□□□ -0.95
CLIP1-207ENST00000536634 DAGLAQ9Y4D2 1042 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms