RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 TM6SF1Q9BZW5 370 aa21.92■■□□□ 1.1
SMPD1-208ENST00000533123 BAZ2AQ9UIF9 1905 aaKnown RBP21.92■■□□□ 1.1
SMPD1-208ENST00000533123 TIAM2Q8IVF5 1701 aa21.91■■□□□ 1.1
SMPD1-208ENST00000533123 ZNF213O14771 459 aa21.91■■□□□ 1.1
SMPD1-208ENST00000533123 DLGAP5Q15398 846 aa21.91■■□□□ 1.1
SMPD1-208ENST00000533123 DPF2Q92785 391 aa21.91■■□□□ 1.1
SMPD1-208ENST00000533123 DDNO94850 711 aaPredicted RBP21.91■■□□□ 1.1
SMPD1-208ENST00000533123 MICALL2Q8IY33 904 aa21.91■■□□□ 1.1
SMPD1-208ENST00000533123 TDRD3Q9H7E2 651 aaKnown RBP21.91■■□□□ 1.1
SMPD1-208ENST00000533123 MKRN1Q9UHC7 482 aaKnown RBP21.91■■□□□ 1.1
SMPD1-208ENST00000533123 CNOT7Q9UIV1 285 aaKnown RBP21.91■■□□□ 1.1
SMPD1-208ENST00000533123 CIZ1Q9ULV3 898 aaPredicted RBP21.91■■□□□ 1.1
SMPD1-208ENST00000533123 CYP46A1Q9Y6A2 500 aa21.91■■□□□ 1.1
SMPD1-208ENST00000533123 ZMYM6O95789 1325 aa21.9■■□□□ 1.1
SMPD1-208ENST00000533123 SPDYE2BA6NHP3 402 aa21.9■■□□□ 1.1
SMPD1-208ENST00000533123 SPDYE6P0CI01 402 aa21.9■■□□□ 1.1
SMPD1-208ENST00000533123 CACNB3P54284 484 aa21.9■■□□□ 1.1
SMPD1-208ENST00000533123 GIMAP6Q6P9H5 292 aa21.9■■□□□ 1.1
SMPD1-208ENST00000533123 RUFY3Q7L099 469 aa21.9■■□□□ 1.1
SMPD1-208ENST00000533123 MYOZ2Q9NPC6 264 aa21.9■■□□□ 1.1
SMPD1-208ENST00000533123 PDRG1Q9NUG6 133 aa21.9■■□□□ 1.1
SMPD1-208ENST00000533123 USP17L12C9JPN9 530 aa21.9■■□□□ 1.1
SMPD1-208ENST00000533123 USP17L21D6R901 530 aa21.9■■□□□ 1.1
SMPD1-208ENST00000533123 WDHD1O75717 1129 aaPredicted RBP21.9■■□□□ 1.1
SMPD1-208ENST00000533123 PICALMQ13492 652 aa21.9■■□□□ 1.1
SMPD1-208ENST00000533123 SLC4A8Q2Y0W8 1093 aa21.9■■□□□ 1.1
SMPD1-208ENST00000533123 RBM26Q5T8P6 1007 aaKnown RBP21.9■■□□□ 1.1
SMPD1-208ENST00000533123 MCM9Q9NXL9 1143 aa21.9■■□□□ 1.1
SMPD1-208ENST00000533123 CDK5RAP2Q96SN8 1893 aa21.9■■□□□ 1.1
SMPD1-208ENST00000533123 CYP2D7A0A087X1C5 515 aa21.89■■□□□ 1.09
SMPD1-208ENST00000533123 MINDY4BA8MYZ0 360 aa21.89■■□□□ 1.09
SMPD1-208ENST00000533123 SMIM22K7EJ46 135 aa21.89■■□□□ 1.09
SMPD1-208ENST00000533123 EGFRP00533 1210 aa21.89■■□□□ 1.09
SMPD1-208ENST00000533123 CTR9Q6PD62 1173 aa21.89■■□□□ 1.09
SMPD1-208ENST00000533123 FLT1P17948 1338 aa21.89■■□□□ 1.09
SMPD1-208ENST00000533123 ZNF280AP59817 542 aaPredicted RBP21.88■■□□□ 1.09
SMPD1-208ENST00000533123 NFIAQ12857 509 aa21.88■■□□□ 1.09
SMPD1-208ENST00000533123 CUL4AQ13619 759 aa21.88■■□□□ 1.09
SMPD1-208ENST00000533123 TSGA10IPQ3SY00 556 aa21.88■■□□□ 1.09
SMPD1-208ENST00000533123 IL27Q8NEV9 243 aa21.88■■□□□ 1.09
SMPD1-208ENST00000533123 NBPF3Q9H094 633 aa21.88■■□□□ 1.09
SMPD1-208ENST00000533123 DDX4Q9NQI0 724 aaKnown RBP21.88■■□□□ 1.09
SMPD1-208ENST00000533123 EVX2Q03828 476 aa21.88■■□□□ 1.09
SMPD1-208ENST00000533123 STOX1Q6ZVD7 989 aa21.88■■□□□ 1.09
SMPD1-208ENST00000533123 SAMD7Q7Z3H4 446 aa21.88■■□□□ 1.09
SMPD1-208ENST00000533123 STK11IPQ8N1F8 1099 aa21.88■■□□□ 1.09
SMPD1-208ENST00000533123 TCEANC2Q96MN5 208 aa21.88■■□□□ 1.09
SMPD1-208ENST00000533123 SAP30BPQ9UHR5 308 aaKnown RBP21.88■■□□□ 1.09
SMPD1-208ENST00000533123 CTDSPL2Q05D32 466 aa21.87■■□□□ 1.09
SMPD1-208ENST00000533123 WNT10BO00744 389 aa21.87■■□□□ 1.09
SMPD1-208ENST00000533123 PSMA5P28066 241 aa21.87■■□□□ 1.09
SMPD1-208ENST00000533123 RAB3GAP1Q15042 981 aa21.87■■□□□ 1.09
SMPD1-208ENST00000533123 NBPF9Q3BBW0 867 aa21.87■■□□□ 1.09
SMPD1-208ENST00000533123 MTMR14Q8NCE2 650 aa21.87■■□□□ 1.09
SMPD1-208ENST00000533123 CLRN2A0PK11 232 aa21.86■■□□□ 1.09
SMPD1-208ENST00000533123 E7EWF7 191 aa21.86■■□□□ 1.09
SMPD1-208ENST00000533123 CYP2D6P10635 497 aa21.86■■□□□ 1.09
SMPD1-208ENST00000533123 PPARAQ07869 468 aa21.86■■□□□ 1.09
SMPD1-208ENST00000533123 TBC1D10BQ4KMP7 808 aaPredicted RBP21.86■■□□□ 1.09
SMPD1-208ENST00000533123 BLOC1S2Q6QNY1 142 aa21.86■■□□□ 1.09
SMPD1-208ENST00000533123 TBC1D10CQ8IV04 446 aa21.86■■□□□ 1.09
SMPD1-208ENST00000533123 GPRC5DQ9NZD1 345 aa21.86■■□□□ 1.09
SMPD1-208ENST00000533123 PKP1Q13835 747 aa21.86■■□□□ 1.09
SMPD1-208ENST00000533123 ZBED3Q96IU2 234 aaPredicted RBP21.86■■□□□ 1.09
SMPD1-208ENST00000533123 INCENPQ9NQS7 918 aa21.86■■□□□ 1.09
SMPD1-208ENST00000533123 ARPP21Q9UBL0 812 aaPredicted RBP21.86■■□□□ 1.09
SMPD1-208ENST00000533123 LIMCH1Q9UPQ0 1083 aa21.86■■□□□ 1.09
SMPD1-208ENST00000533123 ECM29Q5VYK3 1845 aa21.85■■□□□ 1.09
SMPD1-208ENST00000533123 H7C1D1 291 aa21.85■■□□□ 1.09
SMPD1-208ENST00000533123 LARGE1O95461 756 aa21.85■■□□□ 1.09
SMPD1-208ENST00000533123 MMP14P50281 582 aa21.85■■□□□ 1.09
SMPD1-208ENST00000533123 TCP10Q12799 353 aa21.85■■□□□ 1.09
SMPD1-208ENST00000533123 DPY19L2Q6NUT2 758 aa21.85■■□□□ 1.09
SMPD1-208ENST00000533123 TNPO1Q92973 898 aaKnown RBP21.85■■□□□ 1.09
SMPD1-208ENST00000533123 RPS6KB1P23443 525 aa21.84■■□□□ 1.09
SMPD1-208ENST00000533123 EPS15P42566 896 aa21.84■■□□□ 1.09
SMPD1-208ENST00000533123 KRT32Q14532 448 aa21.84■■□□□ 1.09
SMPD1-208ENST00000533123 FOCADQ5VW36 1801 aa21.84■■□□□ 1.09
SMPD1-208ENST00000533123 SBK1Q52WX2 424 aa21.84■■□□□ 1.09
SMPD1-208ENST00000533123 ZFPM1Q8IX07 1006 aa21.84■■□□□ 1.09
SMPD1-208ENST00000533123 IDI2Q9BXS1 227 aa21.84■■□□□ 1.09
SMPD1-208ENST00000533123 CWC22Q9HCG8 908 aaKnown RBP21.84■■□□□ 1.09
SMPD1-208ENST00000533123 ZNF70Q9UC06 446 aaPredicted RBP21.84■■□□□ 1.09
SMPD1-208ENST00000533123 FAM198AQ9UFP1 575 aa21.84■■□□□ 1.09
SMPD1-208ENST00000533123 TACC3Q9Y6A5 838 aa21.84■■□□□ 1.09
SMPD1-208ENST00000533123 NAV1Q8NEY1 1877 aa21.84■■□□□ 1.09
SMPD1-208ENST00000533123 POLR3DP05423 398 aaPredicted RBP21.83■■□□□ 1.09
SMPD1-208ENST00000533123 PLCD1P51178 756 aa21.83■■□□□ 1.09
SMPD1-208ENST00000533123 C12orf60Q5U649 245 aa21.83■■□□□ 1.09
SMPD1-208ENST00000533123 NEK1Q96PY6 1258 aa21.83■■□□□ 1.09
SMPD1-208ENST00000533123 LAMA4Q16363 1823 aa21.83■■□□□ 1.09
SMPD1-208ENST00000533123 SPDYE2Q495Y8 402 aa21.83■■□□□ 1.08
SMPD1-208ENST00000533123 OSBPL5Q9H0X9 879 aaPredicted RBP21.83■■□□□ 1.08
SMPD1-208ENST00000533123 ANAPC4Q9UJX5 808 aa21.83■■□□□ 1.08
SMPD1-208ENST00000533123 TCP10L2B9ZVM9 353 aa21.82■■□□□ 1.08
SMPD1-208ENST00000533123 MYO1BO43795 1136 aa21.82■■□□□ 1.08
SMPD1-208ENST00000533123 KIF4BQ2VIQ3 1234 aa21.82■■□□□ 1.08
SMPD1-208ENST00000533123 VEZTQ9HBM0 779 aa21.82■■□□□ 1.08
SMPD1-208ENST00000533123 TMOD2Q9NZR1 351 aa21.82■■□□□ 1.08
SMPD1-208ENST00000533123 MYH1P12882 1939 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms