RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 IMMTQ16891 758 aaKnown RBP22.25■■□□□ 1.15
SMPD1-203ENST00000527275 GPC2Q8N158 579 aa22.25■■□□□ 1.15
SMPD1-203ENST00000527275 CYP46A1Q9Y6A2 500 aa22.25■■□□□ 1.15
SMPD1-203ENST00000527275 BAZ2AQ9UIF9 1905 aaKnown RBP22.24■■□□□ 1.15
SMPD1-203ENST00000527275 ZMYM6O95789 1325 aa22.24■■□□□ 1.15
SMPD1-203ENST00000527275 CPA1P15085 419 aa22.24■■□□□ 1.15
SMPD1-203ENST00000527275 AK2P54819 239 aa22.24■■□□□ 1.15
SMPD1-203ENST00000527275 DPF2Q92785 391 aa22.24■■□□□ 1.15
SMPD1-203ENST00000527275 MKRN1Q9UHC7 482 aaKnown RBP22.24■■□□□ 1.15
SMPD1-203ENST00000527275 ZNF213O14771 459 aa22.23■■□□□ 1.15
SMPD1-203ENST00000527275 PSMA5P28066 241 aa22.23■■□□□ 1.15
SMPD1-203ENST00000527275 NUCB2P80303 420 aa22.23■■□□□ 1.15
SMPD1-203ENST00000527275 GIMAP6Q6P9H5 292 aa22.23■■□□□ 1.15
SMPD1-203ENST00000527275 INTS4Q96HW7 963 aaKnown RBP22.23■■□□□ 1.15
SMPD1-203ENST00000527275 TIAM2Q8IVF5 1701 aa22.23■■□□□ 1.15
SMPD1-203ENST00000527275 SPDYE2BA6NHP3 402 aa22.23■■□□□ 1.15
SMPD1-203ENST00000527275 WDHD1O75717 1129 aaPredicted RBP22.23■■□□□ 1.15
SMPD1-203ENST00000527275 SPDYE6P0CI01 402 aa22.23■■□□□ 1.15
SMPD1-203ENST00000527275 DLGAP5Q15398 846 aa22.23■■□□□ 1.15
SMPD1-203ENST00000527275 TSGA10IPQ3SY00 556 aa22.23■■□□□ 1.15
SMPD1-203ENST00000527275 RUFY3Q7L099 469 aa22.23■■□□□ 1.15
SMPD1-203ENST00000527275 MAPKAPK5Q8IW41 473 aa22.23■■□□□ 1.15
SMPD1-203ENST00000527275 MICALL2Q8IY33 904 aa22.23■■□□□ 1.15
SMPD1-203ENST00000527275 PDRG1Q9NUG6 133 aa22.23■■□□□ 1.15
SMPD1-203ENST00000527275 USP17L12C9JPN9 530 aa22.22■■□□□ 1.15
SMPD1-203ENST00000527275 USP17L21D6R901 530 aa22.22■■□□□ 1.15
SMPD1-203ENST00000527275 CDK5RAP2Q96SN8 1893 aa22.22■■□□□ 1.15
SMPD1-203ENST00000527275 TDRD3Q9H7E2 651 aaKnown RBP22.22■■□□□ 1.15
SMPD1-203ENST00000527275 CNOT7Q9UIV1 285 aaKnown RBP22.22■■□□□ 1.15
SMPD1-203ENST00000527275 DDNO94850 711 aaPredicted RBP22.22■■□□□ 1.15
SMPD1-203ENST00000527275 ZNF280AP59817 542 aaPredicted RBP22.22■■□□□ 1.15
SMPD1-203ENST00000527275 MYOZ2Q9NPC6 264 aa22.22■■□□□ 1.15
SMPD1-203ENST00000527275 MCM9Q9NXL9 1143 aa22.22■■□□□ 1.15
SMPD1-203ENST00000527275 LIMCH1Q9UPQ0 1083 aa22.22■■□□□ 1.15
SMPD1-203ENST00000527275 SMIM22K7EJ46 135 aa22.21■■□□□ 1.15
SMPD1-203ENST00000527275 EGFRP00533 1210 aa22.21■■□□□ 1.15
SMPD1-203ENST00000527275 CACNB3P54284 484 aa22.21■■□□□ 1.15
SMPD1-203ENST00000527275 CTR9Q6PD62 1173 aa22.21■■□□□ 1.15
SMPD1-203ENST00000527275 NBPF3Q9H094 633 aa22.21■■□□□ 1.15
SMPD1-203ENST00000527275 FLT1P17948 1338 aa22.21■■□□□ 1.15
SMPD1-203ENST00000527275 CYP2D7A0A087X1C5 515 aa22.21■■□□□ 1.15
SMPD1-203ENST00000527275 MINDY4BA8MYZ0 360 aa22.21■■□□□ 1.15
SMPD1-203ENST00000527275 NFIAQ12857 509 aa22.21■■□□□ 1.15
SMPD1-203ENST00000527275 PICALMQ13492 652 aa22.21■■□□□ 1.15
SMPD1-203ENST00000527275 GBP4Q96PP9 640 aa22.21■■□□□ 1.15
SMPD1-203ENST00000527275 COL9A3Q14050 684 aaPredicted RBP22.2■■□□□ 1.14
SMPD1-203ENST00000527275 SLC4A8Q2Y0W8 1093 aa22.2■■□□□ 1.14
SMPD1-203ENST00000527275 STOX1Q6ZVD7 989 aa22.2■■□□□ 1.14
SMPD1-203ENST00000527275 MTMR14Q8NCE2 650 aa22.2■■□□□ 1.14
SMPD1-203ENST00000527275 DDX4Q9NQI0 724 aaKnown RBP22.2■■□□□ 1.14
SMPD1-203ENST00000527275 EVX2Q03828 476 aa22.19■■□□□ 1.14
SMPD1-203ENST00000527275 RBM26Q5T8P6 1007 aaKnown RBP22.19■■□□□ 1.14
SMPD1-203ENST00000527275 SAMD7Q7Z3H4 446 aa22.19■■□□□ 1.14
SMPD1-203ENST00000527275 E7EWF7 191 aa22.19■■□□□ 1.14
SMPD1-203ENST00000527275 WNT10BO00744 389 aa22.19■■□□□ 1.14
SMPD1-203ENST00000527275 MMP14P50281 582 aa22.19■■□□□ 1.14
SMPD1-203ENST00000527275 CTDSPL2Q05D32 466 aa22.19■■□□□ 1.14
SMPD1-203ENST00000527275 PPARAQ07869 468 aa22.19■■□□□ 1.14
SMPD1-203ENST00000527275 GPRC5DQ9NZD1 345 aa22.19■■□□□ 1.14
SMPD1-203ENST00000527275 SAP30BPQ9UHR5 308 aaKnown RBP22.19■■□□□ 1.14
SMPD1-203ENST00000527275 KRT32Q14532 448 aa22.18■■□□□ 1.14
SMPD1-203ENST00000527275 NBPF9Q3BBW0 867 aa22.18■■□□□ 1.14
SMPD1-203ENST00000527275 BLOC1S2Q6QNY1 142 aa22.18■■□□□ 1.14
SMPD1-203ENST00000527275 TBC1D10CQ8IV04 446 aa22.18■■□□□ 1.14
SMPD1-203ENST00000527275 LARP6Q9BRS8 491 aaKnown RBP22.18■■□□□ 1.14
SMPD1-203ENST00000527275 ARPP21Q9UBL0 812 aaPredicted RBP22.18■■□□□ 1.14
SMPD1-203ENST00000527275 ECM29Q5VYK3 1845 aa22.18■■□□□ 1.14
SMPD1-203ENST00000527275 CLRN2A0PK11 232 aa22.18■■□□□ 1.14
SMPD1-203ENST00000527275 CYP2D6P10635 497 aa22.18■■□□□ 1.14
SMPD1-203ENST00000527275 STK11IPQ8N1F8 1099 aa22.18■■□□□ 1.14
SMPD1-203ENST00000527275 ZBED3Q96IU2 234 aaPredicted RBP22.18■■□□□ 1.14
SMPD1-203ENST00000527275 PKP1Q13835 747 aa22.17■■□□□ 1.14
SMPD1-203ENST00000527275 TBC1D10BQ4KMP7 808 aaPredicted RBP22.17■■□□□ 1.14
SMPD1-203ENST00000527275 SBK1Q52WX2 424 aa22.17■■□□□ 1.14
SMPD1-203ENST00000527275 IDI2Q9BXS1 227 aa22.17■■□□□ 1.14
SMPD1-203ENST00000527275 INCENPQ9NQS7 918 aa22.17■■□□□ 1.14
SMPD1-203ENST00000527275 FOCADQ5VW36 1801 aa22.17■■□□□ 1.14
SMPD1-203ENST00000527275 DDX11L8A8MPP1 907 aa22.16■■□□□ 1.14
SMPD1-203ENST00000527275 H7C1D1 291 aa22.16■■□□□ 1.14
SMPD1-203ENST00000527275 DPY19L2Q6NUT2 758 aa22.16■■□□□ 1.14
SMPD1-203ENST00000527275 LAMA4Q16363 1823 aa22.16■■□□□ 1.14
SMPD1-203ENST00000527275 DEKP35659 375 aaKnown RBP22.16■■□□□ 1.14
SMPD1-203ENST00000527275 EPS15P42566 896 aa22.16■■□□□ 1.14
SMPD1-203ENST00000527275 PLCD1P51178 756 aa22.16■■□□□ 1.14
SMPD1-203ENST00000527275 TCP10Q12799 353 aa22.16■■□□□ 1.14
SMPD1-203ENST00000527275 C12orf60Q5U649 245 aa22.16■■□□□ 1.14
SMPD1-203ENST00000527275 ZSCAN31Q96LW9 406 aaPredicted RBP22.16■■□□□ 1.14
SMPD1-203ENST00000527275 NEK1Q96PY6 1258 aa22.16■■□□□ 1.14
SMPD1-203ENST00000527275 FAM198AQ9UFP1 575 aa22.16■■□□□ 1.14
SMPD1-203ENST00000527275 ANAPC4Q9UJX5 808 aa22.16■■□□□ 1.14
SMPD1-203ENST00000527275 NAV1Q8NEY1 1877 aa22.16■■□□□ 1.14
SMPD1-203ENST00000527275 RPS6KB1P23443 525 aa22.15■■□□□ 1.14
SMPD1-203ENST00000527275 SPDYE2Q495Y8 402 aa22.15■■□□□ 1.14
SMPD1-203ENST00000527275 CLEC17AQ6ZS10 378 aa22.15■■□□□ 1.14
SMPD1-203ENST00000527275 ZFPM1Q8IX07 1006 aa22.15■■□□□ 1.14
SMPD1-203ENST00000527275 ZNF70Q9UC06 446 aaPredicted RBP22.15■■□□□ 1.14
SMPD1-203ENST00000527275 TACC3Q9Y6A5 838 aa22.15■■□□□ 1.14
SMPD1-203ENST00000527275 ZC3H4Q9UPT8 1303 aaKnown RBP22.15■■□□□ 1.14
SMPD1-203ENST00000527275 MYO1BO43795 1136 aa22.15■■□□□ 1.14
SMPD1-203ENST00000527275 POLR3DP05423 398 aaPredicted RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms