RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 POLR3DP05423 398 aaPredicted RBP12.42□□□□□ -0.42
LINC01550-203ENST00000512901 CASTP20810 708 aaKnown RBP12.42□□□□□ -0.42
LINC01550-203ENST00000512901 ZNF280AP59817 542 aaPredicted RBP12.42□□□□□ -0.42
LINC01550-203ENST00000512901 PPARAQ07869 468 aa12.42□□□□□ -0.42
LINC01550-203ENST00000512901 TSGA10IPQ3SY00 556 aa12.42□□□□□ -0.42
LINC01550-203ENST00000512901 DPY19L2Q6NUT2 758 aa12.42□□□□□ -0.42
LINC01550-203ENST00000512901 CTR9Q6PD62 1173 aa12.42□□□□□ -0.42
LINC01550-203ENST00000512901 SAP30BPQ9UHR5 308 aaKnown RBP12.42□□□□□ -0.42
LINC01550-203ENST00000512901 TAF6LQ9Y6J9 622 aa12.42□□□□□ -0.42
LINC01550-203ENST00000512901 MYH1P12882 1939 aa12.42□□□□□ -0.42
LINC01550-203ENST00000512901 LAMB1P07942 1786 aa12.42□□□□□ -0.42
LINC01550-203ENST00000512901 E7EWF7 191 aa12.42□□□□□ -0.42
LINC01550-203ENST00000512901 WDHD1O75717 1129 aaPredicted RBP12.42□□□□□ -0.42
LINC01550-203ENST00000512901 CACNB3P54284 484 aa12.42□□□□□ -0.42
LINC01550-203ENST00000512901 CTDSPL2Q05D32 466 aa12.42□□□□□ -0.42
LINC01550-203ENST00000512901 SLC4A8Q2Y0W8 1093 aa12.42□□□□□ -0.42
LINC01550-203ENST00000512901 ADCK5Q3MIX3 580 aa12.42□□□□□ -0.42
LINC01550-203ENST00000512901 STK11IPQ8N1F8 1099 aa12.42□□□□□ -0.42
LINC01550-203ENST00000512901 MTMR14Q8NCE2 650 aa12.42□□□□□ -0.42
LINC01550-203ENST00000512901 CYP2D7A0A087X1C5 515 aa12.41□□□□□ -0.42
LINC01550-203ENST00000512901 SLC3A2P08195 630 aaKnown RBP12.41□□□□□ -0.42
LINC01550-203ENST00000512901 LMOD1P29536 600 aaPredicted RBP12.41□□□□□ -0.42
LINC01550-203ENST00000512901 TRDNQ13061 729 aa12.41□□□□□ -0.42
LINC01550-203ENST00000512901 TBC1D10BQ4KMP7 808 aaPredicted RBP12.41□□□□□ -0.42
LINC01550-203ENST00000512901 SBK1Q52WX2 424 aa12.41□□□□□ -0.42
LINC01550-203ENST00000512901 IL17RAQ96F46 866 aa12.41□□□□□ -0.42
LINC01550-203ENST00000512901 NEK1Q96PY6 1258 aa12.41□□□□□ -0.42
LINC01550-203ENST00000512901 UPF3BQ9BZI7 483 aaKnown RBP12.41□□□□□ -0.42
LINC01550-203ENST00000512901 GPRC5DQ9NZD1 345 aa12.41□□□□□ -0.42
LINC01550-203ENST00000512901 MKRN1Q9UHC7 482 aaKnown RBP12.41□□□□□ -0.42
LINC01550-203ENST00000512901 ZC3H4Q9UPT8 1303 aaKnown RBP12.41□□□□□ -0.42
LINC01550-203ENST00000512901 CLRN2A0PK11 232 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 NEK4P51957 841 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 NFIAQ12857 509 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 BLOC1S2Q6QNY1 142 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 STOX1Q6ZVD7 989 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 SAMD7Q7Z3H4 446 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 RALYLQ86SE5 291 aaKnown RBP12.4□□□□□ -0.42
LINC01550-203ENST00000512901 TBC1D10CQ8IV04 446 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 TM6SF1Q9BZW5 370 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 RNF41Q9H4P4 317 aaPredicted RBP12.4□□□□□ -0.42
LINC01550-203ENST00000512901 VEZTQ9HBM0 779 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 DDX4Q9NQI0 724 aaKnown RBP12.4□□□□□ -0.42
LINC01550-203ENST00000512901 TOMM22Q9NS69 142 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 ZNF70Q9UC06 446 aaPredicted RBP12.4□□□□□ -0.42
LINC01550-203ENST00000512901 CYP46A1Q9Y6A2 500 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 WNT10BO00744 389 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 ST18O60284 1047 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 CYP2D6P10635 497 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 TCP10Q12799 353 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 KIF4BQ2VIQ3 1234 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 AKNAD1Q5T1N1 836 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 MFSD6Q6ZSS7 791 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 NCOA7Q8NI08 942 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 IDI2Q9BXS1 227 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 NBPF3Q9H094 633 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 OSBPL5Q9H0X9 879 aaPredicted RBP12.4□□□□□ -0.42
LINC01550-203ENST00000512901 ANAPC4Q9UJX5 808 aa12.4□□□□□ -0.42
LINC01550-203ENST00000512901 HMGB1P09429 215 aaKnown RBP12.39□□□□□ -0.43
LINC01550-203ENST00000512901 CPA1P15085 419 aa12.39□□□□□ -0.43
LINC01550-203ENST00000512901 NBPF9Q3BBW0 867 aa12.39□□□□□ -0.43
LINC01550-203ENST00000512901 SPDYE2Q495Y8 402 aa12.39□□□□□ -0.43
LINC01550-203ENST00000512901 C12orf60Q5U649 245 aa12.39□□□□□ -0.43
LINC01550-203ENST00000512901 ZSCAN29Q8IWY8 852 aaPredicted RBP12.39□□□□□ -0.43
LINC01550-203ENST00000512901 ZSWIM6Q9HCJ5 1215 aa12.39□□□□□ -0.43
LINC01550-203ENST00000512901 DDX60LQ5H9U9 1706 aaKnown RBP12.39□□□□□ -0.43
LINC01550-203ENST00000512901 TCP10L2B9ZVM9 353 aa12.39□□□□□ -0.43
LINC01550-203ENST00000512901 EGFRP00533 1210 aa12.39□□□□□ -0.43
LINC01550-203ENST00000512901 RRP12Q5JTH9 1297 aaKnown RBP12.39□□□□□ -0.43
LINC01550-203ENST00000512901 RUFY3Q7L099 469 aa12.39□□□□□ -0.43
LINC01550-203ENST00000512901 TTC6Q86TZ1 520 aa12.39□□□□□ -0.43
LINC01550-203ENST00000512901 STAG1Q8WVM7 1258 aa12.39□□□□□ -0.43
LINC01550-203ENST00000512901 ZBED3Q96IU2 234 aaPredicted RBP12.39□□□□□ -0.43
LINC01550-203ENST00000512901 CNNM2Q9H8M5 875 aa12.39□□□□□ -0.43
LINC01550-203ENST00000512901 FAM198AQ9UFP1 575 aa12.39□□□□□ -0.43
LINC01550-203ENST00000512901 ENTPD3O75355 529 aa12.38□□□□□ -0.43
LINC01550-203ENST00000512901 HLA-DOAP06340 250 aa12.38□□□□□ -0.43
LINC01550-203ENST00000512901 EPS15P42566 896 aa12.38□□□□□ -0.43
LINC01550-203ENST00000512901 KRT23Q9C075 422 aa12.38□□□□□ -0.43
LINC01550-203ENST00000512901 PDRG1Q9NUG6 133 aa12.38□□□□□ -0.43
LINC01550-203ENST00000512901 NEDD4P46934 1319 aa12.38□□□□□ -0.43
LINC01550-203ENST00000512901 SMIM22K7EJ46 135 aa12.37□□□□□ -0.43
LINC01550-203ENST00000512901 NPM3O75607 178 aaKnown RBP12.37□□□□□ -0.43
LINC01550-203ENST00000512901 PCP11498 1178 aaKnown RBP12.37□□□□□ -0.43
LINC01550-203ENST00000512901 RPS6KB1P23443 525 aa12.37□□□□□ -0.43
LINC01550-203ENST00000512901 PLCD1P51178 756 aa12.37□□□□□ -0.43
LINC01550-203ENST00000512901 EVX2Q03828 476 aa12.37□□□□□ -0.43
LINC01550-203ENST00000512901 PDE4BQ07343 736 aa12.37□□□□□ -0.43
LINC01550-203ENST00000512901 BECN1Q14457 450 aa12.37□□□□□ -0.43
LINC01550-203ENST00000512901 INCENPQ9NQS7 918 aa12.37□□□□□ -0.43
LINC01550-203ENST00000512901 GLTPD2A6NH11 291 aa12.37□□□□□ -0.43
LINC01550-203ENST00000512901 B4E1Z4 1266 aa12.37□□□□□ -0.43
LINC01550-203ENST00000512901 TNNI2P48788 182 aa12.37□□□□□ -0.43
LINC01550-203ENST00000512901 FGD1P98174 961 aa12.37□□□□□ -0.43
LINC01550-203ENST00000512901 DHX32Q7L7V1 743 aaKnown RBP12.37□□□□□ -0.43
LINC01550-203ENST00000512901 HSCBQ8IWL3 235 aa12.37□□□□□ -0.43
LINC01550-203ENST00000512901 IL27Q8NEV9 243 aa12.37□□□□□ -0.43
LINC01550-203ENST00000512901 TRPM4Q8TD43 1214 aa12.37□□□□□ -0.43
LINC01550-203ENST00000512901 DHX36Q9H2U1 1008 aaKnown RBP12.37□□□□□ -0.43
LINC01550-203ENST00000512901 ADARB2Q9NS39 739 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms