RNA–Protein interactions for RNA: ENST00000512146.6

SNCAIP-216, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,849 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-216ENST00000512146 CERKQ8TCT0 537 aa17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 SDR42E1Q8WUS8 393 aa17.28■□□□□ 0.36
SNCAIP-216ENST00000512146 CCDC69A6NI79 296 aa17.27■□□□□ 0.36
SNCAIP-216ENST00000512146 KIF28PB7ZC32 967 aa17.27■□□□□ 0.36
SNCAIP-216ENST00000512146 RXRAP19793 462 aa17.27■□□□□ 0.36
SNCAIP-216ENST00000512146 ADALQ6DHV7 355 aa17.27■□□□□ 0.36
SNCAIP-216ENST00000512146 KCNG4Q8TDN1 519 aa17.27■□□□□ 0.36
SNCAIP-216ENST00000512146 GOLPH3LQ9H4A5 285 aa17.27■□□□□ 0.36
SNCAIP-216ENST00000512146 GJB4Q9NTQ9 266 aa17.27■□□□□ 0.36
SNCAIP-216ENST00000512146 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.27■□□□□ 0.36
SNCAIP-216ENST00000512146 USP25Q9UHP3 1055 aa17.27■□□□□ 0.36
SNCAIP-216ENST00000512146 FMNL1O95466 1100 aaPredicted RBP17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 HSPA1LP34931 641 aa17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 IARSP41252 1262 aaKnown RBP17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 FAM160A1Q05DH4 1040 aa17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 GRAPQ13588 217 aa17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 CCDC24Q8N4L8 307 aa17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 GRAPLQ8TC17 118 aaPredicted RBP17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 PCDHA7Q9UN72 937 aa17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 TNRC6CQ9HCJ0 1690 aaKnown RBP17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 CAVIN2O95810 425 aa17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 DYNLL1P63167 89 aaKnown RBP17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 MECOMQ03112 1051 aa17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 WTAPQ15007 396 aa17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 SEC23AQ15436 765 aa17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 KRT40Q6A162 431 aa17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 SYNE3Q6ZMZ3 975 aa17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 C15orf52Q6ZUT6 534 aaKnown RBP17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 CKAP2LQ8IYA6 745 aa17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 ESR2Q92731 530 aa17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 AIFM3Q96NN9 605 aa17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 TFCP2L1Q9NZI6 479 aa17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 ZKSCAN5Q9Y2L8 839 aa17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 LEMD3Q9Y2U8 911 aa17.26■□□□□ 0.35
SNCAIP-216ENST00000512146 ADCY5O95622 1261 aa17.25■□□□□ 0.35
SNCAIP-216ENST00000512146 POLR3DP05423 398 aaPredicted RBP17.25■□□□□ 0.35
SNCAIP-216ENST00000512146 U2AF2P26368 475 aaKnown RBP eCLIP17.25■□□□□ 0.35
SNCAIP-216ENST00000512146 ME1P48163 572 aa17.25■□□□□ 0.35
SNCAIP-216ENST00000512146 CCDC73Q6ZRK6 1079 aa17.25■□□□□ 0.35
SNCAIP-216ENST00000512146 CNBD1Q8NA66 436 aa17.25■□□□□ 0.35
SNCAIP-216ENST00000512146 PHKBQ93100 1093 aa17.25■□□□□ 0.35
SNCAIP-216ENST00000512146 MYL10Q9BUA6 226 aa17.25■□□□□ 0.35
SNCAIP-216ENST00000512146 CLIC4Q9Y696 253 aa17.25■□□□□ 0.35
SNCAIP-216ENST00000512146 CHD4Q14839 1912 aa17.25■□□□□ 0.35
SNCAIP-216ENST00000512146 ERICH2A1L162 156 aa17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 PPP2R5BQ15173 497 aa17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 CRY2Q49AN0 593 aa17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 RRP12Q5JTH9 1297 aaKnown RBP17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 SLC27A3Q5K4L6 730 aa17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 TXNRD3Q86VQ6 643 aa17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 CCDC196A0A1B0GTZ2 297 aa17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 MINDY4BA8MYZ0 360 aa17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 ZNF500O60304 480 aaPredicted RBP17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 SSRP1Q08945 709 aaKnown RBP17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 RTN1Q16799 776 aa17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 ANO1Q5XXA6 986 aa17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 CTR9Q6PD62 1173 aa17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 NBPF11Q86T75 865 aa17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 FMR1NBQ8N0W7 255 aaPredicted RBP17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 MRPS27Q92552 414 aaKnown RBP17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 WASF1Q92558 559 aa17.24■□□□□ 0.35
SNCAIP-216ENST00000512146 SPTLC2O15270 562 aa17.23■□□□□ 0.35
SNCAIP-216ENST00000512146 STK38Q15208 465 aa17.23■□□□□ 0.35
SNCAIP-216ENST00000512146 PRR5LQ6MZQ0 368 aa17.23■□□□□ 0.35
SNCAIP-216ENST00000512146 SASS6Q6UVJ0 657 aa17.23■□□□□ 0.35
SNCAIP-216ENST00000512146 CCDC144CPQ8IYA2 1237 aa17.23■□□□□ 0.35
SNCAIP-216ENST00000512146 FSIP1Q8NA03 581 aa17.23■□□□□ 0.35
SNCAIP-216ENST00000512146 UBAC1Q9BSL1 405 aa17.23■□□□□ 0.35
SNCAIP-216ENST00000512146 TOMM22Q9NS69 142 aa17.23■□□□□ 0.35
SNCAIP-216ENST00000512146 ATP8A2Q9NTI2 1148 aa17.23■□□□□ 0.35
SNCAIP-216ENST00000512146 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.23■□□□□ 0.35
SNCAIP-216ENST00000512146 AP5Z1O43299 807 aa17.22■□□□□ 0.35
SNCAIP-216ENST00000512146 GYS1P13807 737 aa17.22■□□□□ 0.35
SNCAIP-216ENST00000512146 MSNP26038 577 aaKnown RBP17.22■□□□□ 0.35
SNCAIP-216ENST00000512146 PRDX5P30044 214 aa17.22■□□□□ 0.35
SNCAIP-216ENST00000512146 SLC39A14Q15043 492 aa17.22■□□□□ 0.35
SNCAIP-216ENST00000512146 ANO6Q4KMQ2 910 aa17.22■□□□□ 0.35
SNCAIP-216ENST00000512146 SPTY2D1Q68D10 685 aaPredicted RBP17.22■□□□□ 0.35
SNCAIP-216ENST00000512146 ZNF654Q8IZM8 581 aa17.22■□□□□ 0.35
SNCAIP-216ENST00000512146 CRACR2BQ8N4Y2 399 aaPredicted RBP17.22■□□□□ 0.35
SNCAIP-216ENST00000512146 FANCBQ8NB91 859 aa17.22■□□□□ 0.35
SNCAIP-216ENST00000512146 TDRD7Q8NHU6 1098 aaKnown RBP17.22■□□□□ 0.35
SNCAIP-216ENST00000512146 ZKSCAN3Q9BRR0 538 aa17.22■□□□□ 0.35
SNCAIP-216ENST00000512146 CBX8Q9HC52 389 aa17.22■□□□□ 0.35
SNCAIP-216ENST00000512146 XDHP47989 1333 aa17.22■□□□□ 0.35
SNCAIP-216ENST00000512146 DUOX1Q9NRD9 1551 aa17.22■□□□□ 0.35
SNCAIP-216ENST00000512146 SMIM22K7EJ46 135 aa17.21■□□□□ 0.35
SNCAIP-216ENST00000512146 ORC4O43929 436 aa17.21■□□□□ 0.35
SNCAIP-216ENST00000512146 KINO60870 393 aaKnown RBP17.21■□□□□ 0.35
SNCAIP-216ENST00000512146 SBK1Q52WX2 424 aa17.21■□□□□ 0.35
SNCAIP-216ENST00000512146 AXDND1Q5T1B0 1012 aaPredicted RBP17.21■□□□□ 0.35
SNCAIP-216ENST00000512146 SLC26A6Q9BXS9 759 aa17.21■□□□□ 0.35
SNCAIP-216ENST00000512146 CRNKL1Q9BZJ0 848 aaKnown RBP17.21■□□□□ 0.35
SNCAIP-216ENST00000512146 DCP1AQ9NPI6 582 aaPredicted RBP17.21■□□□□ 0.35
SNCAIP-216ENST00000512146 TNKSO95271 1327 aa17.21■□□□□ 0.35
SNCAIP-216ENST00000512146 NPHP1O15259 732 aa17.21■□□□□ 0.35
SNCAIP-216ENST00000512146 TRIM29Q14134 588 aa17.21■□□□□ 0.35
SNCAIP-216ENST00000512146 ZSCAN10Q96SZ4 725 aaPredicted RBP17.21■□□□□ 0.35
SNCAIP-216ENST00000512146 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms