RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 FAM83AQ86UY5 434 aa16.74■□□□□ 0.27
DDR1-253ENST00000504651 FAM198AQ9UFP1 575 aa16.74■□□□□ 0.27
DDR1-253ENST00000504651 PPP2R3BQ9Y5P8 575 aa16.74■□□□□ 0.27
DDR1-253ENST00000504651 RPAP1Q9BWH6 1393 aaPredicted RBP16.74■□□□□ 0.27
DDR1-253ENST00000504651 COL2A1P02458 1487 aaPredicted RBP16.73■□□□□ 0.27
DDR1-253ENST00000504651 PRKAB2O43741 272 aa16.73■□□□□ 0.27
DDR1-253ENST00000504651 ENTPD3O75355 529 aa16.73■□□□□ 0.27
DDR1-253ENST00000504651 RASA3Q14644 834 aa16.73■□□□□ 0.27
DDR1-253ENST00000504651 CDC37L1Q7L3B6 337 aa16.73■□□□□ 0.27
DDR1-253ENST00000504651 DDRGK1Q96HY6 314 aa16.73■□□□□ 0.27
DDR1-253ENST00000504651 GLIS2Q9BZE0 524 aaPredicted RBP16.73■□□□□ 0.27
DDR1-253ENST00000504651 OSBPL5Q9H0X9 879 aaPredicted RBP16.73■□□□□ 0.27
DDR1-253ENST00000504651 DEFB129Q9H1M3 183 aa16.73■□□□□ 0.27
DDR1-253ENST00000504651 IL25Q9H293 177 aa16.73■□□□□ 0.27
DDR1-253ENST00000504651 SIPA1L1O43166 1804 aa16.73■□□□□ 0.27
DDR1-253ENST00000504651 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
DDR1-253ENST00000504651 USP48Q86UV5 1035 aa16.72■□□□□ 0.27
DDR1-253ENST00000504651 ZSCAN29Q8IWY8 852 aaPredicted RBP16.72■□□□□ 0.27
DDR1-253ENST00000504651 SMC1BQ8NDV3 1235 aa16.72■□□□□ 0.27
DDR1-253ENST00000504651 FAM151AQ8WW52 585 aa16.72■□□□□ 0.27
DDR1-253ENST00000504651 ESYT1Q9BSJ8 1104 aa16.72■□□□□ 0.27
DDR1-253ENST00000504651 ATP8A2Q9NTI2 1148 aa16.72■□□□□ 0.27
DDR1-253ENST00000504651 LAMA4Q16363 1823 aa16.72■□□□□ 0.27
DDR1-253ENST00000504651 TRPM7Q96QT4 1865 aa16.71■□□□□ 0.27
DDR1-253ENST00000504651 SGSM2O43147 1006 aa16.71■□□□□ 0.27
DDR1-253ENST00000504651 TOMM70O94826 608 aa16.71■□□□□ 0.27
DDR1-253ENST00000504651 APPP05067 770 aa16.71■□□□□ 0.27
DDR1-253ENST00000504651 RBM46Q8TBY0 533 aaKnown RBP16.71■□□□□ 0.27
DDR1-253ENST00000504651 TMEM39BQ9GZU3 492 aa16.71■□□□□ 0.27
DDR1-253ENST00000504651 DCP1AQ9NPI6 582 aaPredicted RBP16.71■□□□□ 0.27
DDR1-253ENST00000504651 SAP30BPQ9UHR5 308 aaKnown RBP16.71■□□□□ 0.27
DDR1-253ENST00000504651 ATRNL1Q5VV63 1379 aa16.7■□□□□ 0.26
DDR1-253ENST00000504651 GSG1L2A8MUP6 293 aa16.7■□□□□ 0.26
DDR1-253ENST00000504651 PATL2C9JE40 543 aaKnown RBP16.7■□□□□ 0.26
DDR1-253ENST00000504651 TDO2P48775 406 aa16.7■□□□□ 0.26
DDR1-253ENST00000504651 VPS53Q5VIR6 699 aa16.7■□□□□ 0.26
DDR1-253ENST00000504651 ZFPM1Q8IX07 1006 aa16.7■□□□□ 0.26
DDR1-253ENST00000504651 CDCA5Q96FF9 252 aa16.7■□□□□ 0.26
DDR1-253ENST00000504651 NACAP1Q9BZK3 213 aa16.7■□□□□ 0.26
DDR1-253ENST00000504651 EPB41L4AQ9HCS5 686 aaPredicted RBP16.7■□□□□ 0.26
DDR1-253ENST00000504651 MCM9Q9NXL9 1143 aa16.7■□□□□ 0.26
DDR1-253ENST00000504651 SSC5DA1L4H1 1573 aa16.69■□□□□ 0.26
DDR1-253ENST00000504651 TRAF5O00463 557 aa16.69■□□□□ 0.26
DDR1-253ENST00000504651 HSPD1P10809 573 aaKnown RBP16.69■□□□□ 0.26
DDR1-253ENST00000504651 SLC4A8Q2Y0W8 1093 aa16.69■□□□□ 0.26
DDR1-253ENST00000504651 PRAMEF18Q5VWM3 479 aa16.69■□□□□ 0.26
DDR1-253ENST00000504651 GIMAP6Q6P9H5 292 aa16.69■□□□□ 0.26
DDR1-253ENST00000504651 AMOTL1Q8IY63 956 aa16.69■□□□□ 0.26
DDR1-253ENST00000504651 NAPBQ9H115 298 aa16.69■□□□□ 0.26
DDR1-253ENST00000504651 ARPP21Q9UBL0 812 aaPredicted RBP16.69■□□□□ 0.26
DDR1-253ENST00000504651 MYH8P13535 1937 aa16.68■□□□□ 0.26
DDR1-253ENST00000504651 DDTLA6NHG4 134 aaPredicted RBP16.68■□□□□ 0.26
DDR1-253ENST00000504651 FOXP2O15409 715 aa16.68■□□□□ 0.26
DDR1-253ENST00000504651 POLR3DP05423 398 aaPredicted RBP16.68■□□□□ 0.26
DDR1-253ENST00000504651 HLA-DOAP06340 250 aa16.68■□□□□ 0.26
DDR1-253ENST00000504651 NF2P35240 595 aa16.68■□□□□ 0.26
DDR1-253ENST00000504651 DLK2Q6UY11 383 aa16.68■□□□□ 0.26
DDR1-253ENST00000504651 KIAA1211Q6ZU35 1233 aa16.68■□□□□ 0.26
DDR1-253ENST00000504651 CDAN1Q8IWY9 1227 aa16.68■□□□□ 0.26
DDR1-253ENST00000504651 IFNL3Q8IZI9 196 aa16.68■□□□□ 0.26
DDR1-253ENST00000504651 TEPSINQ96N21 525 aa16.68■□□□□ 0.26
DDR1-253ENST00000504651 CSRNP1Q96S65 589 aa16.68■□□□□ 0.26
DDR1-253ENST00000504651 DHX36Q9H2U1 1008 aaKnown RBP16.68■□□□□ 0.26
DDR1-253ENST00000504651 MKRN1Q9UHC7 482 aaKnown RBP16.68■□□□□ 0.26
DDR1-253ENST00000504651 PALD1Q9ULE6 856 aa16.68■□□□□ 0.26
DDR1-253ENST00000504651 PAPPA2Q9BXP8 1791 aa16.67■□□□□ 0.26
DDR1-253ENST00000504651 NBPF12Q5TAG4 269 aaPredicted RBP16.67■□□□□ 0.26
DDR1-253ENST00000504651 SH3BP5LQ7L8J4 393 aa16.67■□□□□ 0.26
DDR1-253ENST00000504651 TTC6Q86TZ1 520 aa16.67■□□□□ 0.26
DDR1-253ENST00000504651 DSCC1Q9BVC3 393 aa16.67■□□□□ 0.26
DDR1-253ENST00000504651 ZNF408Q9H9D4 720 aa16.67■□□□□ 0.26
DDR1-253ENST00000504651 ANO2Q9NQ90 1003 aa16.67■□□□□ 0.26
DDR1-253ENST00000504651 ZMYM6O95789 1325 aa16.67■□□□□ 0.26
DDR1-253ENST00000504651 OTOFQ9HC10 1997 aa16.66■□□□□ 0.26
DDR1-253ENST00000504651 ITGBL1O95965 494 aaPredicted RBP16.66■□□□□ 0.26
DDR1-253ENST00000504651 FMR1Q06787 632 aaKnown RBP eCLIP16.66■□□□□ 0.26
DDR1-253ENST00000504651 FSTL1Q12841 308 aa16.66■□□□□ 0.26
DDR1-253ENST00000504651 SUPT20HL1Q3ZLR7 823 aa16.66■□□□□ 0.26
DDR1-253ENST00000504651 HOOK2Q96ED9 719 aa16.66■□□□□ 0.26
DDR1-253ENST00000504651 USP17L12C9JPN9 530 aa16.65■□□□□ 0.26
DDR1-253ENST00000504651 USP17L21D6R901 530 aa16.65■□□□□ 0.26
DDR1-253ENST00000504651 CYP2D6P10635 497 aa16.65■□□□□ 0.26
DDR1-253ENST00000504651 PTH1RQ03431 593 aa16.65■□□□□ 0.26
DDR1-253ENST00000504651 CTR9Q6PD62 1173 aa16.65■□□□□ 0.26
DDR1-253ENST00000504651 CRACR2BQ8N4Y2 399 aaPredicted RBP16.65■□□□□ 0.26
DDR1-253ENST00000504651 TRIM34Q9BYJ4 488 aa16.65■□□□□ 0.26
DDR1-253ENST00000504651 ATAD5Q96QE3 1844 aa16.64■□□□□ 0.25
DDR1-253ENST00000504651 CYP2D7A0A087X1C5 515 aa16.64■□□□□ 0.25
DDR1-253ENST00000504651 MINDY4BA8MYZ0 360 aa16.64■□□□□ 0.25
DDR1-253ENST00000504651 REC8O95072 547 aa16.64■□□□□ 0.25
DDR1-253ENST00000504651 ALX1Q15699 326 aa16.64■□□□□ 0.25
DDR1-253ENST00000504651 SBK1Q52WX2 424 aa16.64■□□□□ 0.25
DDR1-253ENST00000504651 DCAF15Q66K64 600 aa16.64■□□□□ 0.25
DDR1-253ENST00000504651 LSG1Q9H089 658 aaKnown RBP16.64■□□□□ 0.25
DDR1-253ENST00000504651 PI4KBQ9UBF8 816 aa16.64■□□□□ 0.25
DDR1-253ENST00000504651 PASKQ96RG2 1323 aa16.64■□□□□ 0.25
DDR1-253ENST00000504651 ROBO3Q96MS0 1386 aa16.64■□□□□ 0.25
DDR1-253ENST00000504651 DOCK1Q14185 1865 aa16.63■□□□□ 0.25
DDR1-253ENST00000504651 CELF2O95319 508 aaKnown RBP16.63■□□□□ 0.25
DDR1-253ENST00000504651 FGAP02671 866 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms