RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 USPL1Q5W0Q7 1092 aa7.91□□□□□ -1.14
UBE3D-205ENST00000503942 KRTAP4-5Q9BYR2 181 aa7.91□□□□□ -1.14
UBE3D-205ENST00000503942 DISC1Q9NRI5 854 aa7.91□□□□□ -1.14
UBE3D-205ENST00000503942 PCDHGC5Q9Y5F6 944 aa7.91□□□□□ -1.14
UBE3D-205ENST00000503942 ZNF862O60290 1169 aa7.9□□□□□ -1.14
UBE3D-205ENST00000503942 SLFN14P0C7P3 912 aa7.9□□□□□ -1.14
UBE3D-205ENST00000503942 KIF4BQ2VIQ3 1234 aa7.9□□□□□ -1.14
UBE3D-205ENST00000503942 RPS26P11Q5JNZ5 115 aaPredicted RBP7.9□□□□□ -1.14
UBE3D-205ENST00000503942 ARHGAP27Q6ZUM4 889 aa7.9□□□□□ -1.14
UBE3D-205ENST00000503942 EHD4Q9H223 541 aa7.9□□□□□ -1.14
UBE3D-205ENST00000503942 TNKS2Q9H2K2 1166 aa7.9□□□□□ -1.14
UBE3D-205ENST00000503942 FAM53CQ9NYF3 392 aa7.9□□□□□ -1.14
UBE3D-205ENST00000503942 MTMR7Q9Y216 660 aa7.9□□□□□ -1.14
UBE3D-205ENST00000503942 ZNF503-AS2A6NEH8 195 aa7.89□□□□□ -1.15
UBE3D-205ENST00000503942 TTLL4Q14679 1199 aa7.89□□□□□ -1.15
UBE3D-205ENST00000503942 CCER1Q8TC90 406 aaPredicted RBP7.89□□□□□ -1.15
UBE3D-205ENST00000503942 TOX2Q96NM4 488 aa7.89□□□□□ -1.15
UBE3D-205ENST00000503942 ABCB6Q9NP58 842 aa7.89□□□□□ -1.15
UBE3D-205ENST00000503942 TSPAN15O95858 294 aa7.88□□□□□ -1.15
UBE3D-205ENST00000503942 RAP1GAPP47736 663 aa7.88□□□□□ -1.15
UBE3D-205ENST00000503942 KCNMB1Q16558 191 aa7.88□□□□□ -1.15
UBE3D-205ENST00000503942 PRPF40BQ6NWY9 871 aaKnown RBP7.88□□□□□ -1.15
UBE3D-205ENST00000503942 KRT82Q9NSB4 513 aa7.88□□□□□ -1.15
UBE3D-205ENST00000503942 HCLS1P14317 486 aaPredicted RBP7.87□□□□□ -1.15
UBE3D-205ENST00000503942 ITIH2P19823 946 aa7.87□□□□□ -1.15
UBE3D-205ENST00000503942 SERPINB4P48594 390 aa7.87□□□□□ -1.15
UBE3D-205ENST00000503942 HNRNPUQ00839 825 aaKnown RBP eCLIP7.87□□□□□ -1.15
UBE3D-205ENST00000503942 MLANAQ16655 118 aa7.87□□□□□ -1.15
UBE3D-205ENST00000503942 C1QL4Q86Z23 238 aa7.87□□□□□ -1.15
UBE3D-205ENST00000503942 ZC3H12CQ9C0D7 883 aaKnown RBP7.87□□□□□ -1.15
UBE3D-205ENST00000503942 NPHS2Q9NP85 383 aa7.87□□□□□ -1.15
UBE3D-205ENST00000503942 PRDM7Q9NQW5 492 aa7.87□□□□□ -1.15
UBE3D-205ENST00000503942 PCOLCE2Q9UKZ9 415 aa7.87□□□□□ -1.15
UBE3D-205ENST00000503942 SNX11Q9Y5W9 270 aa7.87□□□□□ -1.15
UBE3D-205ENST00000503942 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.86□□□□□ -1.15
UBE3D-205ENST00000503942 RNGTTO60942 597 aaKnown RBP7.86□□□□□ -1.15
UBE3D-205ENST00000503942 NEFMP07197 916 aa7.86□□□□□ -1.15
UBE3D-205ENST00000503942 ZNF865P0CJ78 1059 aaPredicted RBP7.86□□□□□ -1.15
UBE3D-205ENST00000503942 CFPP27918 469 aa7.86□□□□□ -1.15
UBE3D-205ENST00000503942 FAAP100Q0VG06 881 aa7.86□□□□□ -1.15
UBE3D-205ENST00000503942 ZNF211Q13398 564 aaPredicted RBP7.86□□□□□ -1.15
UBE3D-205ENST00000503942 PPP1R16BQ96T49 567 aa7.86□□□□□ -1.15
UBE3D-205ENST00000503942 ABL1P00519 1130 aa7.85□□□□□ -1.15
UBE3D-205ENST00000503942 NEFLP07196 543 aa7.85□□□□□ -1.15
UBE3D-205ENST00000503942 GSTP1P09211 210 aaKnown RBP7.85□□□□□ -1.15
UBE3D-205ENST00000503942 LCE5AQ5TCM9 118 aa7.85□□□□□ -1.15
UBE3D-205ENST00000503942 LCNL1Q6ZST4 164 aa7.85□□□□□ -1.15
UBE3D-205ENST00000503942 TOP6BLQ8N6T0 577 aa7.85□□□□□ -1.15
UBE3D-205ENST00000503942 ANO2Q9NQ90 1003 aa7.85□□□□□ -1.15
UBE3D-205ENST00000503942 CTNND2Q9UQB3 1225 aa7.85□□□□□ -1.15
UBE3D-205ENST00000503942 LRRC56Q8IYG6 542 aaPredicted RBP7.84□□□□□ -1.15
UBE3D-205ENST00000503942 ZSCAN18Q8TBC5 510 aaPredicted RBP7.84□□□□□ -1.15
UBE3D-205ENST00000503942 ASB11Q8WXH4 323 aa7.84□□□□□ -1.15
UBE3D-205ENST00000503942 ISL2Q96A47 359 aa7.84□□□□□ -1.15
UBE3D-205ENST00000503942 LIN37Q96GY3 246 aaPredicted RBP7.84□□□□□ -1.15
UBE3D-205ENST00000503942 HEXIM2Q96MH2 286 aaKnown RBP7.84□□□□□ -1.15
UBE3D-205ENST00000503942 TMEM238LA0A1B0GVL6 79 aa7.83□□□□□ -1.16
UBE3D-205ENST00000503942 CPNE3O75131 537 aaKnown RBP7.83□□□□□ -1.16
UBE3D-205ENST00000503942 ZNF157P51786 506 aaPredicted RBP7.83□□□□□ -1.16
UBE3D-205ENST00000503942 ZP2Q05996 745 aa7.83□□□□□ -1.16
UBE3D-205ENST00000503942 ORC1Q13415 861 aa7.83□□□□□ -1.16
UBE3D-205ENST00000503942 IKZF1Q13422 519 aa7.83□□□□□ -1.16
UBE3D-205ENST00000503942 SOWAHDA6NJG2 315 aa7.82□□□□□ -1.16
UBE3D-205ENST00000503942 LILRA6Q6PI73 481 aa7.82□□□□□ -1.16
UBE3D-205ENST00000503942 SND1Q7KZF4 910 aaKnown RBP eCLIP7.82□□□□□ -1.16
UBE3D-205ENST00000503942 FAM214BQ7L5A3 538 aa7.82□□□□□ -1.16
UBE3D-205ENST00000503942 PDZD3Q86UT5 571 aa7.82□□□□□ -1.16
UBE3D-205ENST00000503942 SIAH1Q8IUQ4 282 aa7.82□□□□□ -1.16
UBE3D-205ENST00000503942 SPACA3Q8IXA5 215 aa7.82□□□□□ -1.16
UBE3D-205ENST00000503942 TMCO4Q5TGY1 634 aa7.81□□□□□ -1.16
UBE3D-205ENST00000503942 FYB2Q5VWT5 728 aa7.81□□□□□ -1.16
UBE3D-205ENST00000503942 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.81□□□□□ -1.16
UBE3D-205ENST00000503942 BRPF3Q9ULD4 1205 aa7.81□□□□□ -1.16
UBE3D-205ENST00000503942 TRAK1Q9UPV9 953 aa7.81□□□□□ -1.16
UBE3D-205ENST00000503942 NCANO14594 1321 aa7.8□□□□□ -1.16
UBE3D-205ENST00000503942 IGF2BP3O00425 579 aaKnown RBP eCLIP7.8□□□□□ -1.16
UBE3D-205ENST00000503942 AFMP43652 599 aa7.8□□□□□ -1.16
UBE3D-205ENST00000503942 ECM1Q16610 540 aa7.8□□□□□ -1.16
UBE3D-205ENST00000503942 ZC3H12AQ5D1E8 599 aaKnown RBP7.8□□□□□ -1.16
UBE3D-205ENST00000503942 EGFL7Q9UHF1 273 aa7.8□□□□□ -1.16
UBE3D-205ENST00000503942 GTF2IRD1Q9UHL9 959 aa7.8□□□□□ -1.16
UBE3D-205ENST00000503942 ICMTO60725 284 aa7.79□□□□□ -1.16
UBE3D-205ENST00000503942 GLI1P08151 1106 aa7.79□□□□□ -1.16
UBE3D-205ENST00000503942 ERVK-24P63145 666 aa7.79□□□□□ -1.16
UBE3D-205ENST00000503942 SYDE1Q6ZW31 735 aaPredicted RBP7.79□□□□□ -1.16
UBE3D-205ENST00000503942 ANKLE2Q86XL3 938 aa7.79□□□□□ -1.16
UBE3D-205ENST00000503942 RNF214Q8ND24 703 aa7.79□□□□□ -1.16
UBE3D-205ENST00000503942 CCDC74AQ96AQ1 378 aa7.79□□□□□ -1.16
UBE3D-205ENST00000503942 FAM129BQ96TA1 746 aa7.79□□□□□ -1.16
UBE3D-205ENST00000503942 SSU72Q9NP77 194 aaKnown RBP7.79□□□□□ -1.16
UBE3D-205ENST00000503942 PRRG2O14669 202 aa7.78□□□□□ -1.16
UBE3D-205ENST00000503942 ZSCAN22P10073 491 aaPredicted RBP7.78□□□□□ -1.16
UBE3D-205ENST00000503942 MFAP1P55081 439 aaKnown RBP7.78□□□□□ -1.16
UBE3D-205ENST00000503942 GRM2Q14416 872 aa7.78□□□□□ -1.16
UBE3D-205ENST00000503942 NKPD1Q17RQ9 610 aa7.78□□□□□ -1.16
UBE3D-205ENST00000503942 KCNB2Q92953 911 aa7.78□□□□□ -1.16
UBE3D-205ENST00000503942 LMCD1Q9NZU5 365 aa7.78□□□□□ -1.16
UBE3D-205ENST00000503942 CCDC9Q9Y3X0 531 aaKnown RBP7.78□□□□□ -1.16
UBE3D-205ENST00000503942 PITPNM2Q9BZ72 1349 aa7.78□□□□□ -1.16
UBE3D-205ENST00000503942 GADD45BO75293 160 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms