RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 DUOX1Q9NRD9 1551 aa24.96■■□□□ 1.59
UBE2D3-216ENST00000503742 SMIM22K7EJ46 135 aa24.96■■□□□ 1.59
UBE2D3-216ENST00000503742 CDC27P30260 824 aa24.96■■□□□ 1.59
UBE2D3-216ENST00000503742 CTR9Q6PD62 1173 aa24.96■■□□□ 1.59
UBE2D3-216ENST00000503742 NFXL1Q6ZNB6 911 aa24.96■■□□□ 1.59
UBE2D3-216ENST00000503742 DZIP1Q86YF9 867 aaKnown RBP24.96■■□□□ 1.59
UBE2D3-216ENST00000503742 SPATA32Q96LK8 384 aa24.96■■□□□ 1.59
UBE2D3-216ENST00000503742 CD209Q9NNX6 404 aa24.96■■□□□ 1.59
UBE2D3-216ENST00000503742 FAM217BQ9NTX9 383 aaPredicted RBP24.96■■□□□ 1.59
UBE2D3-216ENST00000503742 SART3Q15020 963 aaKnown RBP24.95■■□□□ 1.58
UBE2D3-216ENST00000503742 MICU3Q86XE3 530 aa24.95■■□□□ 1.58
UBE2D3-216ENST00000503742 TOMM22Q9NS69 142 aa24.95■■□□□ 1.58
UBE2D3-216ENST00000503742 CDKL5O76039 1030 aa24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 LDHBP07195 334 aaKnown RBP24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 PCP11498 1178 aaKnown RBP24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 IL1R1P14778 569 aa24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 NTRK3Q16288 839 aa24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 FBXO18Q8NFZ0 1043 aa24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 DCP1AQ9NPI6 582 aaPredicted RBP24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 ATP8A2Q9NTI2 1148 aa24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 SLC12A7Q9Y666 1083 aa24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 LAMB1P07942 1786 aa24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 CCDC69A6NI79 296 aa24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 RXRAP19793 462 aa24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 GUCY1B3Q02153 619 aa24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 ILDR1Q86SU0 546 aaPredicted RBP24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 TMTC2Q8N394 836 aa24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 TBC1D16Q8TBP0 767 aa24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 C8orf76Q96K31 380 aa24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 RBSNQ9H1K0 784 aa24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 POLLQ9UGP5 575 aa24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 CFAP45Q9UL16 551 aa24.94■■□□□ 1.58
UBE2D3-216ENST00000503742 CYP2D7A0A087X1C5 515 aa24.93■■□□□ 1.58
UBE2D3-216ENST00000503742 GOLGA8AA7E2F4 631 aa24.93■■□□□ 1.58
UBE2D3-216ENST00000503742 WTAPQ15007 396 aa24.93■■□□□ 1.58
UBE2D3-216ENST00000503742 ATL3Q6DD88 541 aa24.93■■□□□ 1.58
UBE2D3-216ENST00000503742 SP8Q8IXZ3 490 aa24.93■■□□□ 1.58
UBE2D3-216ENST00000503742 STK11IPQ8N1F8 1099 aa24.93■■□□□ 1.58
UBE2D3-216ENST00000503742 ESR2Q92731 530 aa24.93■■□□□ 1.58
UBE2D3-216ENST00000503742 MYH2Q9UKX2 1941 aa24.93■■□□□ 1.58
UBE2D3-216ENST00000503742 USP17L12C9JPN9 530 aa24.93■■□□□ 1.58
UBE2D3-216ENST00000503742 USP17L21D6R901 530 aa24.93■■□□□ 1.58
UBE2D3-216ENST00000503742 CPLX2Q6PUV4 134 aaKnown RBP24.93■■□□□ 1.58
UBE2D3-216ENST00000503742 ZKSCAN3Q9BRR0 538 aa24.93■■□□□ 1.58
UBE2D3-216ENST00000503742 RCAN1P53805 252 aa24.92■■□□□ 1.58
UBE2D3-216ENST00000503742 GRIK5Q16478 980 aa24.92■■□□□ 1.58
UBE2D3-216ENST00000503742 MYL10Q9BUA6 226 aa24.92■■□□□ 1.58
UBE2D3-216ENST00000503742 ERICH2A1L162 156 aa24.91■■□□□ 1.58
UBE2D3-216ENST00000503742 PPEF1O14829 653 aaPredicted RBP24.91■■□□□ 1.58
UBE2D3-216ENST00000503742 SRGNP10124 158 aa24.91■■□□□ 1.58
UBE2D3-216ENST00000503742 NASPP49321 788 aaPredicted RBP24.91■■□□□ 1.58
UBE2D3-216ENST00000503742 SEC23AQ15436 765 aa24.91■■□□□ 1.58
UBE2D3-216ENST00000503742 SBK1Q52WX2 424 aa24.91■■□□□ 1.58
UBE2D3-216ENST00000503742 KLHL34Q8N239 644 aa24.91■■□□□ 1.58
UBE2D3-216ENST00000503742 LETM1O95202 739 aaPredicted RBP24.91■■□□□ 1.58
UBE2D3-216ENST00000503742 GSTO1P78417 241 aa24.91■■□□□ 1.58
UBE2D3-216ENST00000503742 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.91■■□□□ 1.581e-8■□□□□ 9.1
UBE2D3-216ENST00000503742 ATP6V0A2Q9Y487 856 aa24.91■■□□□ 1.58
UBE2D3-216ENST00000503742 ECM29Q5VYK3 1845 aa24.91■■□□□ 1.58
UBE2D3-216ENST00000503742 TPRNQ4KMQ1 711 aa24.9■■□□□ 1.58
UBE2D3-216ENST00000503742 OTUD7BQ6GQQ9 843 aa24.9■■□□□ 1.58
UBE2D3-216ENST00000503742 SYNE3Q6ZMZ3 975 aa24.9■■□□□ 1.58
UBE2D3-216ENST00000503742 CCDC144CPQ8IYA2 1237 aa24.9■■□□□ 1.58
UBE2D3-216ENST00000503742 MKRN1Q9UHC7 482 aaKnown RBP24.9■■□□□ 1.58
UBE2D3-216ENST00000503742 RCOR1Q9UKL0 485 aa24.9■■□□□ 1.58
UBE2D3-216ENST00000503742 RANBP6O60518 1105 aaKnown RBP24.89■■□□□ 1.58
UBE2D3-216ENST00000503742 PPP4CP60510 307 aa24.89■■□□□ 1.58
UBE2D3-216ENST00000503742 PGBD1Q96JS3 809 aa24.89■■□□□ 1.58
UBE2D3-216ENST00000503742 ZNF396Q96N95 335 aaPredicted RBP24.89■■□□□ 1.58
UBE2D3-216ENST00000503742 UBAC1Q9BSL1 405 aa24.89■■□□□ 1.58
UBE2D3-216ENST00000503742 ARPP21Q9UBL0 812 aaPredicted RBP24.89■■□□□ 1.58
UBE2D3-216ENST00000503742 ORC4O43929 436 aa24.89■■□□□ 1.57
UBE2D3-216ENST00000503742 MMP10P09238 476 aa24.89■■□□□ 1.57
UBE2D3-216ENST00000503742 NPR1P16066 1061 aa24.89■■□□□ 1.57
UBE2D3-216ENST00000503742 STK36Q9NRP7 1315 aa24.89■■□□□ 1.57
UBE2D3-216ENST00000503742 DLEC1Q9Y238 1755 aa24.88■■□□□ 1.57
UBE2D3-216ENST00000503742 PHKBQ93100 1093 aa24.88■■□□□ 1.57
UBE2D3-216ENST00000503742 USP28Q96RU2 1077 aa24.88■■□□□ 1.57
UBE2D3-216ENST00000503742 TSPY26PQ9H489 355 aa24.88■■□□□ 1.57
UBE2D3-216ENST00000503742 RGS17Q9UGC6 210 aaPredicted RBP24.88■■□□□ 1.57
UBE2D3-216ENST00000503742 TNKSO95271 1327 aa24.88■■□□□ 1.57
UBE2D3-216ENST00000503742 COL11A2P13942 1736 aaPredicted RBP24.88■■□□□ 1.57
UBE2D3-216ENST00000503742 IFNAR1P17181 557 aa24.87■■□□□ 1.57
UBE2D3-216ENST00000503742 IARSP41252 1262 aaKnown RBP24.87■■□□□ 1.57
UBE2D3-216ENST00000503742 ALG1Q9BT22 464 aa24.87■■□□□ 1.57
UBE2D3-216ENST00000503742 GJB4Q9NTQ9 266 aa24.87■■□□□ 1.57
UBE2D3-216ENST00000503742 PARP3Q9Y6F1 533 aa24.87■■□□□ 1.57
UBE2D3-216ENST00000503742 LDHCP07864 332 aa24.87■■□□□ 1.57
UBE2D3-216ENST00000503742 LIG1P18858 919 aa24.87■■□□□ 1.57
UBE2D3-216ENST00000503742 PDE6BP35913 854 aa24.87■■□□□ 1.57
UBE2D3-216ENST00000503742 EVX2Q03828 476 aa24.87■■□□□ 1.57
UBE2D3-216ENST00000503742 DIXDC1Q155Q3 683 aa24.87■■□□□ 1.57
UBE2D3-216ENST00000503742 ZNF654Q8IZM8 581 aa24.87■■□□□ 1.57
UBE2D3-216ENST00000503742 ZSCAN10Q96SZ4 725 aaPredicted RBP24.87■■□□□ 1.57
UBE2D3-216ENST00000503742 RTN1Q16799 776 aa24.86■■□□□ 1.57
UBE2D3-216ENST00000503742 BRAPQ7Z569 592 aa24.86■■□□□ 1.57
UBE2D3-216ENST00000503742 ENAHQ8N8S7 591 aaPredicted RBP24.86■■□□□ 1.57
UBE2D3-216ENST00000503742 AIFM3Q96NN9 605 aa24.86■■□□□ 1.57
UBE2D3-216ENST00000503742 MROH7-TTC4A0A0A0MT08 1334 aa24.86■■□□□ 1.57
UBE2D3-216ENST00000503742 GOLGA6L4A6NEF3 574 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms