RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 COL4A1P02462 1669 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 FGRP09769 529 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 H2AFXP16104 143 aaPredicted RBP8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 ZNF18P17022 549 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 MYL5Q02045 173 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 WASHC4Q2M389 1173 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 CCDC102BQ68D86 513 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 CPLX2Q6PUV4 134 aaKnown RBP8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 SYNE3Q6ZMZ3 975 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 TMEM139Q8IV31 216 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 DNAJC10Q8IXB1 793 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 NKX2-3Q8TAU0 364 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 KRT23Q9C075 422 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 GREM2Q9H772 168 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 DDX60LQ5H9U9 1706 aaKnown RBP8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 PDS5AQ29RF7 1337 aaKnown RBP8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 NT5C2P49902 561 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 CEBPZQ03701 1054 aaKnown RBP8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 SF3A1Q15459 793 aaKnown RBP8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 METTL24Q5JXM2 366 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 KRBA2Q6ZNG9 492 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 CHST3Q7LGC8 479 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 METTL16Q86W50 562 aaKnown RBP8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 KIF18AQ8NI77 898 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 ZNF804BA4D1E1 1349 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 ZNF532Q9HCE3 1301 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 IGSF3O75054 1194 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 MMP1P03956 469 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 FECHP22830 423 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 SYKP43405 635 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 FANCCQ00597 558 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 TRDNQ13061 729 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 SLC4A9Q96Q91 983 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 SDF4Q9BRK5 362 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 TACC3Q9Y6A5 838 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 SBF2Q86WG5 1849 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 CPLX1O14810 134 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 ZBTB43O43298 467 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 KIF20AO95235 890 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 SLU7O95391 586 aaKnown RBP8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 PTPREP23469 700 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 GUCY1B3Q02153 619 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 GORABQ5T7V8 394 aa8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 FBXO2Q9UK22 296 aaPredicted RBP8.33□□□□□ -1.08
LYSMD3-203ENST00000500869 PCP11498 1178 aaKnown RBP8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 HLFQ16534 295 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 FAM89AQ96GI7 184 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 SRRTQ9BXP5 876 aaKnown RBP8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 IFNKQ9P0W0 207 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 IRS4O14654 1257 aaPredicted RBP8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 TRHP20396 242 aaPredicted RBP8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 HAND2P61296 217 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 SLC9C2Q5TAH2 1124 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 NOSTRINQ8IVI9 506 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 STK11IPQ8N1F8 1099 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 TMTC2Q8N394 836 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 SLC5A1P13866 664 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 MORC3Q14149 939 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 AKNAD1Q5T1N1 836 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 OTUD7BQ6GQQ9 843 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 TRIM65Q6PJ69 517 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 PI16Q6UXB8 463 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 LDHAL6AQ6ZMR3 332 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 IFNL3Q8IZI9 196 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 ENOX1Q8TC92 643 aaKnown RBP8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 PKNOX2Q96KN3 472 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 WWC3Q9ULE0 1092 aa8.32□□□□□ -1.08
LYSMD3-203ENST00000500869 GSG1L2A8MUP6 293 aa8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 SEMA3EO15041 775 aa8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 SFPQP23246 707 aaKnown RBP eCLIP8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 PHKA1P46020 1223 aa8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 RILPL1Q5EBL4 403 aa8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 SH3RF1Q7Z6J0 888 aa8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 KRI1Q8N9T8 703 aaKnown RBP8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 SPATA5Q8NB90 893 aa8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 ASAP1Q9ULH1 1129 aa8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 MYH14Q7Z406 1995 aaKnown RBP8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 CCDC88AQ3V6T2 1871 aa8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 GOLGA6L9A6NEM1 432 aa8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 POLR3DP05423 398 aaPredicted RBP8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 IARSP41252 1262 aaKnown RBP8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 TOB1P50616 345 aaPredicted RBP8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 TPRNQ4KMQ1 711 aa8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 REXO1L1PQ8IX06 675 aa8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 MLKLQ8NB16 471 aa8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 INTS13Q9NVM9 706 aa8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 SRPRBQ9Y5M8 271 aaKnown RBP8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 GOLGA8AA7E2F4 631 aa8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 EIF5P55010 431 aaKnown RBP8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 SSRP1Q08945 709 aaKnown RBP8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 SEC23AQ15436 765 aa8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 TAF7LQ5H9L4 462 aa8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 KANK3Q6NY19 840 aa8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 ZNF215Q9UL58 517 aaPredicted RBP8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 COL1A1P02452 1464 aaPredicted RBP8.31□□□□□ -1.08
LYSMD3-203ENST00000500869 ATP8B1O43520 1251 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 ACTN4O43707 911 aaKnown RBP8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 NRDCO43847 1150 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 DEXIO95424 95 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 BMP6P22004 513 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms