RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 POLR3DP05423 398 aaPredicted RBP20.76■□□□□ 0.91
PSMB4-206ENST00000495288 USP17L8P0C7I0 530 aa20.76■□□□□ 0.91
PSMB4-206ENST00000495288 YBX3P16989 372 aaKnown RBP eCLIP20.76■□□□□ 0.916e-18■□□□□ 8.1
PSMB4-206ENST00000495288 LMNB1P20700 586 aa20.76■□□□□ 0.91
PSMB4-206ENST00000495288 FGD1P98174 961 aa20.76■□□□□ 0.91
PSMB4-206ENST00000495288 SLC4A8Q2Y0W8 1093 aa20.76■□□□□ 0.91
PSMB4-206ENST00000495288 AKNAD1Q5T1N1 836 aa20.76■□□□□ 0.91
PSMB4-206ENST00000495288 MFSD6Q6ZSS7 791 aa20.76■□□□□ 0.91
PSMB4-206ENST00000495288 AMOTL1Q8IY63 956 aa20.76■□□□□ 0.91
PSMB4-206ENST00000495288 OGFOD1Q8N543 542 aa20.76■□□□□ 0.91
PSMB4-206ENST00000495288 AGBL3Q8NEM8 1001 aa20.76■□□□□ 0.91
PSMB4-206ENST00000495288 GMLQ99445 158 aa20.76■□□□□ 0.91
PSMB4-206ENST00000495288 LARP6Q9BRS8 491 aaKnown RBP20.76■□□□□ 0.91
PSMB4-206ENST00000495288 TOMM22Q9NS69 142 aa20.76■□□□□ 0.91
PSMB4-206ENST00000495288 SLC3A2P08195 630 aaKnown RBP20.75■□□□□ 0.91
PSMB4-206ENST00000495288 PICALMQ13492 652 aa20.75■□□□□ 0.91
PSMB4-206ENST00000495288 RRP12Q5JTH9 1297 aaKnown RBP20.75■□□□□ 0.91
PSMB4-206ENST00000495288 CHST3Q7LGC8 479 aa20.75■□□□□ 0.91
PSMB4-206ENST00000495288 ANAPC4Q9UJX5 808 aa20.75■□□□□ 0.91
PSMB4-206ENST00000495288 HSP90AA1P07900 732 aaKnown RBP20.74■□□□□ 0.91
PSMB4-206ENST00000495288 DLGAP5Q15398 846 aa20.74■□□□□ 0.91
PSMB4-206ENST00000495288 SBK1Q52WX2 424 aa20.74■□□□□ 0.91
PSMB4-206ENST00000495288 Q6ZUG5 572 aa20.74■□□□□ 0.91
PSMB4-206ENST00000495288 LRRC2Q9BYS8 371 aa20.74■□□□□ 0.91
PSMB4-206ENST00000495288 RNF41Q9H4P4 317 aaPredicted RBP20.74■□□□□ 0.91
PSMB4-206ENST00000495288 ARPP21Q9UBL0 812 aaPredicted RBP20.74■□□□□ 0.91
PSMB4-206ENST00000495288 B4E1Z4 1266 aa20.73■□□□□ 0.91
PSMB4-206ENST00000495288 SMIM22K7EJ46 135 aa20.73■□□□□ 0.91
PSMB4-206ENST00000495288 FZD9O00144 591 aa20.73■□□□□ 0.91
PSMB4-206ENST00000495288 MCM5P33992 734 aa20.73■□□□□ 0.91
PSMB4-206ENST00000495288 EXOSC10Q01780 885 aaKnown RBP20.73■□□□□ 0.91
PSMB4-206ENST00000495288 ANKRD1Q15327 319 aa20.73■□□□□ 0.91
PSMB4-206ENST00000495288 GPR162Q16538 588 aa20.73■□□□□ 0.91
PSMB4-206ENST00000495288 KRT23Q9C075 422 aa20.73■□□□□ 0.91
PSMB4-206ENST00000495288 ALDH8A1Q9H2A2 487 aaPredicted RBP20.73■□□□□ 0.91
PSMB4-206ENST00000495288 CNNM2Q9H8M5 875 aa20.73■□□□□ 0.91
PSMB4-206ENST00000495288 FOXD4L1Q9NU39 408 aa20.73■□□□□ 0.91
PSMB4-206ENST00000495288 MKRN1Q9UHC7 482 aaKnown RBP20.73■□□□□ 0.91
PSMB4-206ENST00000495288 LIMCH1Q9UPQ0 1083 aa20.73■□□□□ 0.91
PSMB4-206ENST00000495288 TACC3Q9Y6A5 838 aa20.73■□□□□ 0.91
PSMB4-206ENST00000495288 PRC1O43663 620 aa20.72■□□□□ 0.91
PSMB4-206ENST00000495288 C12orf60Q5U649 245 aa20.72■□□□□ 0.91
PSMB4-206ENST00000495288 MB21D2Q8IYB1 491 aaPredicted RBP20.72■□□□□ 0.91
PSMB4-206ENST00000495288 STAG1Q8WVM7 1258 aa20.72■□□□□ 0.91
PSMB4-206ENST00000495288 PRMT6Q96LA8 375 aaPredicted RBP20.72■□□□□ 0.91
PSMB4-206ENST00000495288 TDRD3Q9H7E2 651 aaKnown RBP20.72■□□□□ 0.91
PSMB4-206ENST00000495288 FLT1P17948 1338 aa20.72■□□□□ 0.91
PSMB4-206ENST00000495288 WDHD1O75717 1129 aaPredicted RBP20.71■□□□□ 0.91
PSMB4-206ENST00000495288 GMPSP49915 693 aaPredicted RBP20.71■□□□□ 0.91
PSMB4-206ENST00000495288 CACNB3P54284 484 aa20.71■□□□□ 0.91
PSMB4-206ENST00000495288 EVX2Q03828 476 aa20.71■□□□□ 0.91
PSMB4-206ENST00000495288 TMX3Q96JJ7 454 aa20.71■□□□□ 0.91
PSMB4-206ENST00000495288 NEDD4P46934 1319 aa20.71■□□□□ 0.91
PSMB4-206ENST00000495288 ZNF646O15015 1829 aaPredicted RBP20.7■□□□□ 0.9
PSMB4-206ENST00000495288 KDM4AO75164 1064 aa20.7■□□□□ 0.9
PSMB4-206ENST00000495288 RPS12P25398 132 aaKnown RBP20.7■□□□□ 0.9
PSMB4-206ENST00000495288 RBM26Q5T8P6 1007 aaKnown RBP20.7■□□□□ 0.9
PSMB4-206ENST00000495288 CYB5R4Q7L1T6 521 aa20.7■□□□□ 0.9
PSMB4-206ENST00000495288 DDX4Q9NQI0 724 aaKnown RBP20.7■□□□□ 0.9
PSMB4-206ENST00000495288 RNF181Q9P0P0 153 aa20.7■□□□□ 0.9
PSMB4-206ENST00000495288 ZNF541Q9H0D2 1346 aa20.7■□□□□ 0.9
PSMB4-206ENST00000495288 PRDM1O75626 825 aa20.69■□□□□ 0.9
PSMB4-206ENST00000495288 PDE4BQ07343 736 aa20.69■□□□□ 0.9
PSMB4-206ENST00000495288 TOB2Q14106 344 aaPredicted RBP20.69■□□□□ 0.9
PSMB4-206ENST00000495288 NKX2-3Q8TAU0 364 aa20.69■□□□□ 0.9
PSMB4-206ENST00000495288 DYNLL2Q96FJ2 89 aa20.69■□□□□ 0.9
PSMB4-206ENST00000495288 ZSCAN31Q96LW9 406 aaPredicted RBP20.69■□□□□ 0.9
PSMB4-206ENST00000495288 ADAMTSL1Q8N6G6 1762 aa20.69■□□□□ 0.9
PSMB4-206ENST00000495288 PSME4Q14997 1843 aa20.69■□□□□ 0.9
PSMB4-206ENST00000495288 SPDYE2BA6NHP3 402 aa20.68■□□□□ 0.9
PSMB4-206ENST00000495288 RANBP6O60518 1105 aaKnown RBP20.68■□□□□ 0.9
PSMB4-206ENST00000495288 SPDYE6P0CI01 402 aa20.68■□□□□ 0.9
PSMB4-206ENST00000495288 PLCD1P51178 756 aa20.68■□□□□ 0.9
PSMB4-206ENST00000495288 ANTXR2P58335 489 aa20.68■□□□□ 0.9
PSMB4-206ENST00000495288 TCP10Q12799 353 aa20.68■□□□□ 0.9
PSMB4-206ENST00000495288 NFIAQ12857 509 aa20.68■□□□□ 0.9
PSMB4-206ENST00000495288 TTC6Q86TZ1 520 aa20.68■□□□□ 0.9
PSMB4-206ENST00000495288 ESR2Q92731 530 aa20.68■□□□□ 0.9
PSMB4-206ENST00000495288 BRF1Q92994 677 aa20.68■□□□□ 0.9
PSMB4-206ENST00000495288 TMOD2Q9NZR1 351 aa20.68■□□□□ 0.9
PSMB4-206ENST00000495288 ZSWIM5Q9P217 1185 aa20.68■□□□□ 0.9
PSMB4-206ENST00000495288 NAP1L2Q9ULW6 460 aaPredicted RBP20.68■□□□□ 0.9
PSMB4-206ENST00000495288 BAZ2AQ9UIF9 1905 aaKnown RBP20.68■□□□□ 0.9
PSMB4-206ENST00000495288 SHTN1A0MZ66 631 aa20.67■□□□□ 0.9
PSMB4-206ENST00000495288 C9orf131Q5VYM1 1079 aa20.67■□□□□ 0.9
PSMB4-206ENST00000495288 ZFPM1Q8IX07 1006 aa20.67■□□□□ 0.9
PSMB4-206ENST00000495288 MKNK2Q9HBH9 465 aa20.67■□□□□ 0.9
PSMB4-206ENST00000495288 MYOZ2Q9NPC6 264 aa20.67■□□□□ 0.9
PSMB4-206ENST00000495288 GPHNQ9NQX3 736 aaPredicted RBP20.67■□□□□ 0.9
PSMB4-206ENST00000495288 ZNF70Q9UC06 446 aaPredicted RBP20.67■□□□□ 0.9
PSMB4-206ENST00000495288 CNOT7Q9UIV1 285 aaKnown RBP20.67■□□□□ 0.9
PSMB4-206ENST00000495288 TPCN1Q9ULQ1 816 aa20.67■□□□□ 0.9
PSMB4-206ENST00000495288 LAMA4Q16363 1823 aa20.67■□□□□ 0.9
PSMB4-206ENST00000495288 CLRN2A0PK11 232 aa20.66■□□□□ 0.9
PSMB4-206ENST00000495288 IFIT3O14879 490 aaKnown RBP20.66■□□□□ 0.9
PSMB4-206ENST00000495288 PCP11498 1178 aaKnown RBP20.66■□□□□ 0.9
PSMB4-206ENST00000495288 MMP14P50281 582 aa20.66■□□□□ 0.9
PSMB4-206ENST00000495288 APOBRQ0VD83 1088 aa20.66■□□□□ 0.9
PSMB4-206ENST00000495288 ZSCAN29Q8IWY8 852 aaPredicted RBP20.66■□□□□ 0.9
PSMB4-206ENST00000495288 DPF2Q92785 391 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms