RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 CXCL9Q07325 125 aa24.4■■□□□ 1.5
KPNA1-210ENST00000494339 SLC4A8Q2Y0W8 1093 aa24.4■■□□□ 1.5
KPNA1-210ENST00000494339 FOXD4L1Q9NU39 408 aa24.4■■□□□ 1.5
KPNA1-210ENST00000494339 MKRN1Q9UHC7 482 aaKnown RBP24.4■■□□□ 1.5
KPNA1-210ENST00000494339 TACC3Q9Y6A5 838 aa24.4■■□□□ 1.5
KPNA1-210ENST00000494339 MYO3BQ8WXR4 1341 aa24.4■■□□□ 1.5
KPNA1-210ENST00000494339 AKNAD1Q5T1N1 836 aa24.39■■□□□ 1.5
KPNA1-210ENST00000494339 APOBEC3HQ6NTF7 200 aaKnown RBP24.39■■□□□ 1.5
KPNA1-210ENST00000494339 ARHGAP27Q6ZUM4 889 aa24.39■■□□□ 1.5
KPNA1-210ENST00000494339 SLKQ9H2G2 1235 aaPredicted RBP24.39■■□□□ 1.5
KPNA1-210ENST00000494339 LAMB1P07942 1786 aa24.39■■□□□ 1.49
KPNA1-210ENST00000494339 USP17L8P0C7I0 530 aa24.39■■□□□ 1.49
KPNA1-210ENST00000494339 EVX2Q03828 476 aa24.39■■□□□ 1.49
KPNA1-210ENST00000494339 MFSD6Q6ZSS7 791 aa24.39■■□□□ 1.49
KPNA1-210ENST00000494339 Q6ZUG5 572 aa24.39■■□□□ 1.49
KPNA1-210ENST00000494339 MB21D2Q8IYB1 491 aaPredicted RBP24.39■■□□□ 1.49
KPNA1-210ENST00000494339 ZDHHC15Q96MV8 337 aa24.39■■□□□ 1.49
KPNA1-210ENST00000494339 MRIQ9BWK5 157 aa24.39■■□□□ 1.49
KPNA1-210ENST00000494339 ARPP21Q9UBL0 812 aaPredicted RBP24.39■■□□□ 1.49
KPNA1-210ENST00000494339 LIMCH1Q9UPQ0 1083 aa24.39■■□□□ 1.49
KPNA1-210ENST00000494339 B4E1Z4 1266 aa24.38■■□□□ 1.49
KPNA1-210ENST00000494339 CYP2D6P10635 497 aa24.38■■□□□ 1.49
KPNA1-210ENST00000494339 FGD1P98174 961 aa24.38■■□□□ 1.49
KPNA1-210ENST00000494339 HDLBPQ00341 1268 aaKnown RBP24.38■■□□□ 1.49
KPNA1-210ENST00000494339 EXOSC10Q01780 885 aaKnown RBP24.38■■□□□ 1.49
KPNA1-210ENST00000494339 TOB2Q14106 344 aaPredicted RBP24.38■■□□□ 1.49
KPNA1-210ENST00000494339 NKX2-3Q8TAU0 364 aa24.38■■□□□ 1.49
KPNA1-210ENST00000494339 STAG1Q8WVM7 1258 aa24.38■■□□□ 1.49
KPNA1-210ENST00000494339 USP40Q9NVE5 1235 aa24.38■■□□□ 1.49
KPNA1-210ENST00000494339 ANAPC4Q9UJX5 808 aa24.38■■□□□ 1.49
KPNA1-210ENST00000494339 SERPINA10Q9UK55 444 aa24.38■■□□□ 1.49
KPNA1-210ENST00000494339 CIAPIN1Q6FI81 312 aa24.37■■□□□ 1.49
KPNA1-210ENST00000494339 TOMM22Q9NS69 142 aa24.37■■□□□ 1.49
KPNA1-210ENST00000494339 FOCADQ5VW36 1801 aa24.37■■□□□ 1.49
KPNA1-210ENST00000494339 ANKRD1Q15327 319 aa24.37■■□□□ 1.49
KPNA1-210ENST00000494339 RRP12Q5JTH9 1297 aaKnown RBP24.37■■□□□ 1.49
KPNA1-210ENST00000494339 CDC42EP5Q6NZY7 148 aa24.37■■□□□ 1.49
KPNA1-210ENST00000494339 GMLQ99445 158 aa24.37■■□□□ 1.49
KPNA1-210ENST00000494339 ALDH8A1Q9H2A2 487 aaPredicted RBP24.37■■□□□ 1.49
KPNA1-210ENST00000494339 SAP30BPQ9UHR5 308 aaKnown RBP24.37■■□□□ 1.49
KPNA1-210ENST00000494339 FLT1P17948 1338 aa24.37■■□□□ 1.49
KPNA1-210ENST00000494339 MCM5P33992 734 aa24.36■■□□□ 1.49
KPNA1-210ENST00000494339 SBK1Q52WX2 424 aa24.36■■□□□ 1.49
KPNA1-210ENST00000494339 ECM29Q5VYK3 1845 aa24.36■■□□□ 1.49
KPNA1-210ENST00000494339 PRC1O43663 620 aa24.35■■□□□ 1.49
KPNA1-210ENST00000494339 PICALMQ13492 652 aa24.35■■□□□ 1.49
KPNA1-210ENST00000494339 RNF41Q9H4P4 317 aaPredicted RBP24.35■■□□□ 1.49
KPNA1-210ENST00000494339 TPCN1Q9ULQ1 816 aa24.35■■□□□ 1.49
KPNA1-210ENST00000494339 MYH1P12882 1939 aa24.35■■□□□ 1.49
KPNA1-210ENST00000494339 LARGE1O95461 756 aa24.35■■□□□ 1.49
KPNA1-210ENST00000494339 ANTXR2P58335 489 aa24.35■■□□□ 1.49
KPNA1-210ENST00000494339 CFAP100Q494V2 611 aa24.35■■□□□ 1.49
KPNA1-210ENST00000494339 CNNM2Q9H8M5 875 aa24.35■■□□□ 1.49
KPNA1-210ENST00000494339 KDM4AO75164 1064 aa24.34■■□□□ 1.49
KPNA1-210ENST00000494339 WDHD1O75717 1129 aaPredicted RBP24.34■■□□□ 1.49
KPNA1-210ENST00000494339 CYB5R4Q7L1T6 521 aa24.34■■□□□ 1.49
KPNA1-210ENST00000494339 BRF1Q92994 677 aa24.34■■□□□ 1.49
KPNA1-210ENST00000494339 ANP32EQ9BTT0 268 aa24.34■■□□□ 1.49
KPNA1-210ENST00000494339 KRT23Q9C075 422 aa24.34■■□□□ 1.49
KPNA1-210ENST00000494339 POLR3DP05423 398 aaPredicted RBP24.33■■□□□ 1.49
KPNA1-210ENST00000494339 C12orf60Q5U649 245 aa24.33■■□□□ 1.49
KPNA1-210ENST00000494339 AMOTL1Q8IY63 956 aa24.33■■□□□ 1.49
KPNA1-210ENST00000494339 OGFOD1Q8N543 542 aa24.33■■□□□ 1.49
KPNA1-210ENST00000494339 AGBL3Q8NEM8 1001 aa24.33■■□□□ 1.49
KPNA1-210ENST00000494339 DDX60LQ5H9U9 1706 aaKnown RBP24.33■■□□□ 1.49
KPNA1-210ENST00000494339 YBX3P16989 372 aaKnown RBP eCLIP24.33■■□□□ 1.49
KPNA1-210ENST00000494339 TNIP1Q15025 636 aa24.33■■□□□ 1.49
KPNA1-210ENST00000494339 DDX4Q9NQI0 724 aaKnown RBP24.33■■□□□ 1.49
KPNA1-210ENST00000494339 GPHNQ9NQX3 736 aaPredicted RBP24.33■■□□□ 1.49
KPNA1-210ENST00000494339 HDAC9Q9UKV0 1011 aa24.33■■□□□ 1.49
KPNA1-210ENST00000494339 PRDM1O75626 825 aa24.32■■□□□ 1.48
KPNA1-210ENST00000494339 ME3Q16798 604 aa24.32■■□□□ 1.48
KPNA1-210ENST00000494339 ZSWIM5Q9P217 1185 aa24.32■■□□□ 1.48
KPNA1-210ENST00000494339 FZD9O00144 591 aa24.31■■□□□ 1.48
KPNA1-210ENST00000494339 SLC3A2P08195 630 aaKnown RBP24.31■■□□□ 1.48
KPNA1-210ENST00000494339 PLCD1P51178 756 aa24.31■■□□□ 1.48
KPNA1-210ENST00000494339 CACNB3P54284 484 aa24.31■■□□□ 1.48
KPNA1-210ENST00000494339 EIF6P56537 245 aaKnown RBP24.31■■□□□ 1.48
KPNA1-210ENST00000494339 ZSCAN31Q96LW9 406 aaPredicted RBP24.31■■□□□ 1.48
KPNA1-210ENST00000494339 NFIAQ12857 509 aa24.31■■□□□ 1.48
KPNA1-210ENST00000494339 CUL4AQ13619 759 aa24.31■■□□□ 1.48
KPNA1-210ENST00000494339 PRMT6Q96LA8 375 aaPredicted RBP24.31■■□□□ 1.48
KPNA1-210ENST00000494339 AGXT2Q9BYV1 514 aa24.31■■□□□ 1.48
KPNA1-210ENST00000494339 SBF1O95248 1867 aa24.31■■□□□ 1.48
KPNA1-210ENST00000494339 WDR19Q8NEZ3 1342 aa24.3■■□□□ 1.48
KPNA1-210ENST00000494339 LMNB1P20700 586 aa24.3■■□□□ 1.48
KPNA1-210ENST00000494339 APOBRQ0VD83 1088 aa24.3■■□□□ 1.48
KPNA1-210ENST00000494339 DYNLL2Q96FJ2 89 aa24.3■■□□□ 1.48
KPNA1-210ENST00000494339 TDRD3Q9H7E2 651 aaKnown RBP24.3■■□□□ 1.48
KPNA1-210ENST00000494339 CHMP5Q9NZZ3 219 aa24.3■■□□□ 1.48
KPNA1-210ENST00000494339 DICER1Q9UPY3 1922 aaKnown RBP24.29■■□□□ 1.48
KPNA1-210ENST00000494339 SH2B1Q9NRF2 756 aaPredicted RBP24.29■■□□□ 1.48
KPNA1-210ENST00000494339 GJA3Q9Y6H8 435 aa24.29■■□□□ 1.48
KPNA1-210ENST00000494339 FGRP09769 529 aa24.29■■□□□ 1.48
KPNA1-210ENST00000494339 STK3Q13188 491 aa24.29■■□□□ 1.48
KPNA1-210ENST00000494339 NECAB1Q8N987 351 aa24.29■■□□□ 1.48
KPNA1-210ENST00000494339 ESR2Q92731 530 aa24.29■■□□□ 1.48
KPNA1-210ENST00000494339 CIZ1Q9ULV3 898 aaPredicted RBP24.29■■□□□ 1.48
KPNA1-210ENST00000494339 ZNF541Q9H0D2 1346 aa24.28■■□□□ 1.48
KPNA1-210ENST00000494339 RANBP6O60518 1105 aaKnown RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms