RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 PKD2L1Q9P0L9 805 aa16.43■□□□□ 0.22
ARHGEF39-205ENST00000490638 CARMIL3Q8ND23 1372 aa16.43■□□□□ 0.22
ARHGEF39-205ENST00000490638 E7EWF7 191 aa16.42■□□□□ 0.22
ARHGEF39-205ENST00000490638 UBE2HP62256 183 aa16.42■□□□□ 0.22
ARHGEF39-205ENST00000490638 FKBP15Q5T1M5 1219 aa16.42■□□□□ 0.22
ARHGEF39-205ENST00000490638 DEFB132Q7Z7B7 95 aa16.42■□□□□ 0.22
ARHGEF39-205ENST00000490638 TCHPQ9BT92 498 aa16.42■□□□□ 0.22
ARHGEF39-205ENST00000490638 HOMER2Q9NSB8 354 aa16.42■□□□□ 0.22
ARHGEF39-205ENST00000490638 ZBTB21Q9ULJ3 1066 aa16.42■□□□□ 0.22
ARHGEF39-205ENST00000490638 PREX1Q8TCU6 1659 aa16.42■□□□□ 0.22
ARHGEF39-205ENST00000490638 DEXIO95424 95 aa16.42■□□□□ 0.22
ARHGEF39-205ENST00000490638 DNM1Q05193 864 aaKnown RBP16.42■□□□□ 0.22
ARHGEF39-205ENST00000490638 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.42■□□□□ 0.22
ARHGEF39-205ENST00000490638 SPTLC2O15270 562 aa16.42■□□□□ 0.22
ARHGEF39-205ENST00000490638 ANTXR1Q9H6X2 564 aa16.42■□□□□ 0.22
ARHGEF39-205ENST00000490638 MED14O60244 1454 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 KDM2BQ8NHM5 1336 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 CAGE1Q8TC20 777 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 BICD1Q96G01 975 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 CSRNP1Q96S65 589 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 COA1Q9GZY4 146 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 ATP8A2Q9NTI2 1148 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 F13A1P00488 732 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 CETN1Q12798 172 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 CHURC1Q8WUH1 139 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 USP17L3A6NCW0 530 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 USP17L4A6NCW7 530 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 DIXDC1Q155Q3 683 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 CCDC40Q4G0X9 1142 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 USP17L1Q7RTZ2 530 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 MTIF2P46199 727 aaKnown RBP16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 DTHD1Q6ZMT9 781 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 CACNA2D4Q7Z3S7 1137 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 ISCA1Q9BUE6 129 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 BRIP1Q9BX63 1249 aa16.41■□□□□ 0.22
ARHGEF39-205ENST00000490638 CFBP00751 764 aa16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 USH1GQ495M9 461 aa16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 AS3MTQ9HBK9 375 aa16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 CPS1P31327 1500 aa16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 SASH1O94885 1247 aa16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 GSPT1P15170 499 aaKnown RBP16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 TRIM28Q13263 835 aaKnown RBP16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 JAKMIP3Q5VZ66 844 aa16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 KIFC2Q96AC6 838 aa16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 GOPCQ9HD26 462 aa16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 hCG_1642624A0A1W2PR95 340 aa16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 PPP2R5BQ15173 497 aa16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 RC3H1Q5TC82 1133 aaKnown RBP16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 KRI1Q8N9T8 703 aaKnown RBP16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 MRPS27Q92552 414 aaKnown RBP16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 INTS4Q96HW7 963 aaKnown RBP16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 MINPP1Q9UNW1 487 aa16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 CNPY2Q9Y2B0 182 aa16.4■□□□□ 0.22
ARHGEF39-205ENST00000490638 ICA1Q05084 483 aa16.39■□□□□ 0.21
ARHGEF39-205ENST00000490638 PAGR1Q9BTK6 254 aa16.39■□□□□ 0.21
ARHGEF39-205ENST00000490638 PHKBQ93100 1093 aa16.39■□□□□ 0.21
ARHGEF39-205ENST00000490638 EXOC1Q9NV70 894 aa16.39■□□□□ 0.21
ARHGEF39-205ENST00000490638 SYT1P21579 422 aa16.39■□□□□ 0.21
ARHGEF39-205ENST00000490638 ENOX2Q16206 610 aaKnown RBP16.39■□□□□ 0.21
ARHGEF39-205ENST00000490638 SUPT20HL1Q3ZLR7 823 aa16.39■□□□□ 0.21
ARHGEF39-205ENST00000490638 GLT8D2Q9H1C3 349 aa16.39■□□□□ 0.21
ARHGEF39-205ENST00000490638 GRPEL1Q9HAV7 217 aa16.39■□□□□ 0.21
ARHGEF39-205ENST00000490638 HSPA4P34932 840 aa16.39■□□□□ 0.21
ARHGEF39-205ENST00000490638 ASIC1P78348 528 aa16.39■□□□□ 0.21
ARHGEF39-205ENST00000490638 PTH1RQ03431 593 aa16.39■□□□□ 0.21
ARHGEF39-205ENST00000490638 BRAPQ7Z569 592 aa16.39■□□□□ 0.21
ARHGEF39-205ENST00000490638 FNBP4Q8N3X1 1017 aaPredicted RBP16.39■□□□□ 0.21
ARHGEF39-205ENST00000490638 STAP2Q9UGK3 403 aa16.39■□□□□ 0.21
ARHGEF39-205ENST00000490638 FRMPD1Q5SYB0 1578 aa16.39■□□□□ 0.21
ARHGEF39-205ENST00000490638 DCCP43146 1447 aa16.38■□□□□ 0.21
ARHGEF39-205ENST00000490638 MYCLP12524 364 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF39-205ENST00000490638 RASGRF1Q13972 1273 aa16.38■□□□□ 0.21
ARHGEF39-205ENST00000490638 RRAGBQ5VZM2 374 aa16.38■□□□□ 0.21
ARHGEF39-205ENST00000490638 ZNF654Q8IZM8 581 aa16.38■□□□□ 0.21
ARHGEF39-205ENST00000490638 DTNBO60941 627 aa16.38■□□□□ 0.21
ARHGEF39-205ENST00000490638 POTEJP0CG39 1038 aa16.38■□□□□ 0.21
ARHGEF39-205ENST00000490638 DYNLL1P63167 89 aaKnown RBP16.38■□□□□ 0.21
ARHGEF39-205ENST00000490638 DIS3L2Q8IYB7 885 aaKnown RBP16.38■□□□□ 0.21
ARHGEF39-205ENST00000490638 ZNF397Q8NF99 534 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF39-205ENST00000490638 DHX58Q96C10 678 aa16.38■□□□□ 0.21
ARHGEF39-205ENST00000490638 DNAI2Q9GZS0 605 aa16.38■□□□□ 0.21
ARHGEF39-205ENST00000490638 BCORL1Q5H9F3 1711 aa16.38■□□□□ 0.21
ARHGEF39-205ENST00000490638 PNMA1Q8ND90 353 aa16.38■□□□□ 0.21
ARHGEF39-205ENST00000490638 BRDTQ58F21 947 aaPredicted RBP16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 CCDC174Q6PII3 467 aa16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 FAM177A1Q8N128 213 aaPredicted RBP16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 MST1RQ04912 1400 aa16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 NRXN1Q9ULB1 1477 aa16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 ZNF165P49910 485 aa16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 ZNF174Q15697 407 aa16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 ABCB5Q2M3G0 1257 aa16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 OTUD7BQ6GQQ9 843 aa16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 LRRC47Q8N1G4 583 aaKnown RBP16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 CCDC150Q8NCX0 1101 aa16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 CCDC17Q96LX7 622 aa16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 SERPINB13Q9UIV8 391 aa16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 USP17L8P0C7I0 530 aa16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 RDXP35241 583 aaKnown RBP16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 LZTS2Q9BRK4 669 aa16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 ATP10DQ9P241 1426 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms