RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 MESP2Q0VG99 397 aa6.77□□□□□ -1.33
HMGB1P36-201ENST00000487709 MLANAQ16655 118 aa6.77□□□□□ -1.33
HMGB1P36-201ENST00000487709 PHLDB3Q6NSJ2 640 aa6.77□□□□□ -1.33
HMGB1P36-201ENST00000487709 ZSWIM9Q86XI8 627 aa6.77□□□□□ -1.33
HMGB1P36-201ENST00000487709 TOP6BLQ8N6T0 577 aa6.77□□□□□ -1.33
HMGB1P36-201ENST00000487709 TRAIPQ9BWF2 469 aa6.77□□□□□ -1.33
HMGB1P36-201ENST00000487709 MKNK2Q9HBH9 465 aa6.77□□□□□ -1.33
HMGB1P36-201ENST00000487709 SSU72Q9NP77 194 aaKnown RBP6.77□□□□□ -1.33
HMGB1P36-201ENST00000487709 CPNE3O75131 537 aaKnown RBP6.76□□□□□ -1.33
HMGB1P36-201ENST00000487709 GADD45BO75293 160 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P36-201ENST00000487709 NEFLP07196 543 aa6.76□□□□□ -1.33
HMGB1P36-201ENST00000487709 GSTP1P09211 210 aaKnown RBP6.76□□□□□ -1.33
HMGB1P36-201ENST00000487709 KIF4BQ2VIQ3 1234 aa6.76□□□□□ -1.33
HMGB1P36-201ENST00000487709 SLC23A3Q6PIS1 610 aa6.76□□□□□ -1.33
HMGB1P36-201ENST00000487709 PCDHGC5Q9Y5F6 944 aa6.76□□□□□ -1.33
HMGB1P36-201ENST00000487709 TMEM238LA0A1B0GVL6 79 aa6.75□□□□□ -1.33
HMGB1P36-201ENST00000487709 NEFMP07197 916 aa6.75□□□□□ -1.33
HMGB1P36-201ENST00000487709 PTPN12Q05209 780 aaKnown RBP6.75□□□□□ -1.33
HMGB1P36-201ENST00000487709 KCNMB1Q16558 191 aa6.75□□□□□ -1.33
HMGB1P36-201ENST00000487709 FLAD1Q8NFF5 587 aa6.75□□□□□ -1.33
HMGB1P36-201ENST00000487709 KCNB2Q92953 911 aa6.75□□□□□ -1.33
HMGB1P36-201ENST00000487709 PCOLCE2Q9UKZ9 415 aa6.75□□□□□ -1.33
HMGB1P36-201ENST00000487709 KRTAP9-7A8MTY7 169 aa6.74□□□□□ -1.33
HMGB1P36-201ENST00000487709 H3BRB1 525 aa6.74□□□□□ -1.33
HMGB1P36-201ENST00000487709 HNRNPUQ00839 825 aaKnown RBP eCLIP6.74□□□□□ -1.33
HMGB1P36-201ENST00000487709 IKZF1Q13422 519 aa6.74□□□□□ -1.33
HMGB1P36-201ENST00000487709 RPS26P11Q5JNZ5 115 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P36-201ENST00000487709 PRPF40BQ6NWY9 871 aaKnown RBP6.74□□□□□ -1.33
HMGB1P36-201ENST00000487709 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.74□□□□□ -1.33
HMGB1P36-201ENST00000487709 ISL2Q96A47 359 aa6.74□□□□□ -1.33
HMGB1P36-201ENST00000487709 TUT1Q9H6E5 874 aaKnown RBP6.74□□□□□ -1.33
HMGB1P36-201ENST00000487709 ZNF503-AS2A6NEH8 195 aa6.73□□□□□ -1.33
HMGB1P36-201ENST00000487709 ZNF865P0CJ78 1059 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P36-201ENST00000487709 RAP1GAPP47736 663 aa6.73□□□□□ -1.33
HMGB1P36-201ENST00000487709 LIN37Q96GY3 246 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P36-201ENST00000487709 KRT82Q9NSB4 513 aa6.73□□□□□ -1.33
HMGB1P36-201ENST00000487709 GPN3Q9UHW5 284 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P36-201ENST00000487709 NDUFB5O43674 189 aa6.72□□□□□ -1.33
HMGB1P36-201ENST00000487709 ICMTO60725 284 aa6.72□□□□□ -1.33
HMGB1P36-201ENST00000487709 BRD1O95696 1058 aa6.72□□□□□ -1.33
HMGB1P36-201ENST00000487709 ZP2Q05996 745 aa6.72□□□□□ -1.33
HMGB1P36-201ENST00000487709 GLYCTKQ8IVS8 523 aa6.72□□□□□ -1.33
HMGB1P36-201ENST00000487709 CCDC74AQ96AQ1 378 aa6.72□□□□□ -1.33
HMGB1P36-201ENST00000487709 HEXIM2Q96MH2 286 aaKnown RBP6.72□□□□□ -1.33
HMGB1P36-201ENST00000487709 TOX2Q96NM4 488 aa6.72□□□□□ -1.33
HMGB1P36-201ENST00000487709 KRTAP4-11Q9BYQ6 195 aa6.72□□□□□ -1.33
HMGB1P36-201ENST00000487709 TNKS2Q9H2K2 1166 aa6.72□□□□□ -1.33
HMGB1P36-201ENST00000487709 FAM53CQ9NYF3 392 aa6.72□□□□□ -1.33
HMGB1P36-201ENST00000487709 EIF1AYO14602 144 aaKnown RBP6.71□□□□□ -1.34
HMGB1P36-201ENST00000487709 KCNA1Q09470 495 aa6.71□□□□□ -1.34
HMGB1P36-201ENST00000487709 GRM2Q14416 872 aa6.71□□□□□ -1.34
HMGB1P36-201ENST00000487709 KRTAP19-4Q3LI73 84 aa6.71□□□□□ -1.34
HMGB1P36-201ENST00000487709 CILP2Q8IUL8 1156 aa6.71□□□□□ -1.34
HMGB1P36-201ENST00000487709 BHLHE22Q8NFJ8 381 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P36-201ENST00000487709 TRAK1Q9UPV9 953 aa6.71□□□□□ -1.34
HMGB1P36-201ENST00000487709 CFPP27918 469 aa6.7□□□□□ -1.34
HMGB1P36-201ENST00000487709 SERPINB4P48594 390 aa6.7□□□□□ -1.34
HMGB1P36-201ENST00000487709 PPP2R3AQ06190 1150 aa6.7□□□□□ -1.34
HMGB1P36-201ENST00000487709 PDE3BQ13370 1112 aa6.7□□□□□ -1.34
HMGB1P36-201ENST00000487709 FYB2Q5VWT5 728 aa6.7□□□□□ -1.34
HMGB1P36-201ENST00000487709 DTHD1Q6ZMT9 781 aa6.7□□□□□ -1.34
HMGB1P36-201ENST00000487709 AEBP1Q8IUX7 1158 aa6.7□□□□□ -1.34
HMGB1P36-201ENST00000487709 ASB11Q8WXH4 323 aa6.7□□□□□ -1.34
HMGB1P36-201ENST00000487709 EGFL7Q9UHF1 273 aa6.7□□□□□ -1.34
HMGB1P36-201ENST00000487709 CTNND2Q9UQB3 1225 aa6.7□□□□□ -1.34
HMGB1P36-201ENST00000487709 SNX11Q9Y5W9 270 aa6.7□□□□□ -1.34
HMGB1P36-201ENST00000487709 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P36-201ENST00000487709 TSPAN15O95858 294 aa6.69□□□□□ -1.34
HMGB1P36-201ENST00000487709 FCGRTP55899 365 aa6.69□□□□□ -1.34
HMGB1P36-201ENST00000487709 MAP1SQ66K74 1059 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P36-201ENST00000487709 MPZL3Q6UWV2 235 aa6.69□□□□□ -1.34
HMGB1P36-201ENST00000487709 PDZD3Q86UT5 571 aa6.69□□□□□ -1.34
HMGB1P36-201ENST00000487709 SULF2Q8IWU5 870 aa6.69□□□□□ -1.34
HMGB1P36-201ENST00000487709 SPACA3Q8IXA5 215 aa6.69□□□□□ -1.34
HMGB1P36-201ENST00000487709 LRRC56Q8IYG6 542 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P36-201ENST00000487709 RNF214Q8ND24 703 aa6.69□□□□□ -1.34
HMGB1P36-201ENST00000487709 TMC1Q8TDI8 760 aa6.69□□□□□ -1.34
HMGB1P36-201ENST00000487709 STK35Q8TDR2 534 aa6.69□□□□□ -1.34
HMGB1P36-201ENST00000487709 FAM129BQ96TA1 746 aa6.69□□□□□ -1.34
HMGB1P36-201ENST00000487709 TMEM39AQ9NV64 488 aa6.69□□□□□ -1.34
HMGB1P36-201ENST00000487709 GTF2IRD1Q9UHL9 959 aa6.69□□□□□ -1.34
HMGB1P36-201ENST00000487709 GPR182O15218 404 aa6.68□□□□□ -1.34
HMGB1P36-201ENST00000487709 ZC3H12AQ5D1E8 599 aaKnown RBP6.68□□□□□ -1.34
HMGB1P36-201ENST00000487709 PRR23BQ6ZRT6 265 aa6.68□□□□□ -1.34
HMGB1P36-201ENST00000487709 LCNL1Q6ZST4 164 aa6.68□□□□□ -1.34
HMGB1P36-201ENST00000487709 SYDE1Q6ZW31 735 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P36-201ENST00000487709 ZSCAN18Q8TBC5 510 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P36-201ENST00000487709 EPS8L3Q8TE67 593 aaKnown RBP6.68□□□□□ -1.34
HMGB1P36-201ENST00000487709 ACSBG1Q96GR2 724 aa6.68□□□□□ -1.34
HMGB1P36-201ENST00000487709 PPP1R16BQ96T49 567 aa6.68□□□□□ -1.34
HMGB1P36-201ENST00000487709 NIF3L1Q9GZT8 377 aa6.68□□□□□ -1.34
HMGB1P36-201ENST00000487709 ERVK-24P63145 666 aa6.67□□□□□ -1.34
HMGB1P36-201ENST00000487709 ARHGAP4P98171 946 aa6.67□□□□□ -1.34
HMGB1P36-201ENST00000487709 ECM1Q16610 540 aa6.67□□□□□ -1.34
HMGB1P36-201ENST00000487709 C1QL4Q86Z23 238 aa6.67□□□□□ -1.34
HMGB1P36-201ENST00000487709 CCER1Q8TC90 406 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P36-201ENST00000487709 GPBAR1Q8TDU6 330 aa6.67□□□□□ -1.34
HMGB1P36-201ENST00000487709 DNAJC25Q9H1X3 360 aa6.67□□□□□ -1.34
HMGB1P36-201ENST00000487709 PRDM10Q9NQV6 1147 aa6.67□□□□□ -1.34
HMGB1P36-201ENST00000487709 CSADQ9Y600 493 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms