RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 ZMYM1Q5SVZ6 1142 aa8.59□□□□□ -1.03
SMARCAL1-212ENST00000486983 L1TD1Q5T7N2 865 aaKnown RBP8.59□□□□□ -1.03
SMARCAL1-212ENST00000486983 KSR2Q6VAB6 950 aa8.59□□□□□ -1.03
SMARCAL1-212ENST00000486983 PPP1R42Q7Z4L9 355 aa8.59□□□□□ -1.03
SMARCAL1-212ENST00000486983 SLC52A2Q9HAB3 445 aa8.59□□□□□ -1.03
SMARCAL1-212ENST00000486983 ETNK1Q9HBU6 452 aa8.59□□□□□ -1.03
SMARCAL1-212ENST00000486983 CWC22Q9HCG8 908 aaKnown RBP8.59□□□□□ -1.03
SMARCAL1-212ENST00000486983 GOPCQ9HD26 462 aa8.59□□□□□ -1.03
SMARCAL1-212ENST00000486983 DDX21Q9NR30 783 aaKnown RBP eCLIP8.59□□□□□ -1.03
SMARCAL1-212ENST00000486983 RGS17Q9UGC6 210 aaPredicted RBP8.59□□□□□ -1.03
SMARCAL1-212ENST00000486983 COL15A1P39059 1388 aa8.59□□□□□ -1.03
SMARCAL1-212ENST00000486983 SPATA31A3Q5VYP0 1347 aa8.58□□□□□ -1.04
SMARCAL1-212ENST00000486983 TTC41PQ6P2S7 1318 aa8.58□□□□□ -1.04
SMARCAL1-212ENST00000486983 ZBTB7CA1YPR0 619 aa8.58□□□□□ -1.04
SMARCAL1-212ENST00000486983 APBB1O00213 710 aa8.58□□□□□ -1.04
SMARCAL1-212ENST00000486983 KCNQ3O43525 872 aa8.58□□□□□ -1.04
SMARCAL1-212ENST00000486983 HSP90AA1P07900 732 aaKnown RBP8.58□□□□□ -1.04
SMARCAL1-212ENST00000486983 PHKG2P15735 406 aa8.58□□□□□ -1.04
SMARCAL1-212ENST00000486983 EIF2S2P20042 333 aaKnown RBP8.58□□□□□ -1.04
SMARCAL1-212ENST00000486983 ATP4AP20648 1035 aa8.58□□□□□ -1.04
SMARCAL1-212ENST00000486983 NUCB2P80303 420 aa8.58□□□□□ -1.04
SMARCAL1-212ENST00000486983 SKOR2Q2VWA4 1001 aaPredicted RBP8.58□□□□□ -1.04
SMARCAL1-212ENST00000486983 FIGNL1Q6PIW4 674 aa8.58□□□□□ -1.04
SMARCAL1-212ENST00000486983 ERC1Q8IUD2 1116 aa8.58□□□□□ -1.04
SMARCAL1-212ENST00000486983 LINS1Q8NG48 757 aa8.58□□□□□ -1.04
SMARCAL1-212ENST00000486983 RHPN1Q8TCX5 695 aa8.58□□□□□ -1.04
SMARCAL1-212ENST00000486983 ZCCHC2Q9C0B9 1178 aaKnown RBP8.58□□□□□ -1.04
SMARCAL1-212ENST00000486983 KLF15Q9UIH9 416 aa8.58□□□□□ -1.04
SMARCAL1-212ENST00000486983 GLI3P10071 1580 aa8.57□□□□□ -1.04
SMARCAL1-212ENST00000486983 SRGAP3O43295 1099 aa8.57□□□□□ -1.04
SMARCAL1-212ENST00000486983 NBPF7P0C2Y1 421 aaPredicted RBP8.57□□□□□ -1.04
SMARCAL1-212ENST00000486983 CHMLP26374 656 aa8.57□□□□□ -1.04
SMARCAL1-212ENST00000486983 TLR1Q15399 786 aa8.57□□□□□ -1.04
SMARCAL1-212ENST00000486983 ZNF790Q6PG37 636 aa8.57□□□□□ -1.04
SMARCAL1-212ENST00000486983 FCHSD1Q86WN1 690 aa8.57□□□□□ -1.04
SMARCAL1-212ENST00000486983 IFNL2Q8IZJ0 200 aa8.57□□□□□ -1.04
SMARCAL1-212ENST00000486983 TNPO1Q92973 898 aaKnown RBP8.57□□□□□ -1.04
SMARCAL1-212ENST00000486983 TRIM11Q96F44 468 aa8.57□□□□□ -1.04
SMARCAL1-212ENST00000486983 PCDHGC4Q9Y5F7 938 aa8.57□□□□□ -1.04
SMARCAL1-212ENST00000486983 LAMB4A4D0S4 1761 aa8.57□□□□□ -1.04
SMARCAL1-212ENST00000486983 C5P01031 1676 aa8.56□□□□□ -1.04
SMARCAL1-212ENST00000486983 RGPD5Q99666 1765 aa8.56□□□□□ -1.04
SMARCAL1-212ENST00000486983 SURF6O75683 361 aaKnown RBP8.56□□□□□ -1.04
SMARCAL1-212ENST00000486983 CYP2E1P05181 493 aaPredicted RBP8.56□□□□□ -1.04
SMARCAL1-212ENST00000486983 ADH6P28332 368 aa8.56□□□□□ -1.04
SMARCAL1-212ENST00000486983 PI4K2BQ8TCG2 481 aa8.56□□□□□ -1.04
SMARCAL1-212ENST00000486983 CEP126Q9P2H0 1117 aa8.56□□□□□ -1.04
SMARCAL1-212ENST00000486983 MAP3K2Q9Y2U5 619 aa8.56□□□□□ -1.04
SMARCAL1-212ENST00000486983 FSD2A1L4K1 749 aa8.55□□□□□ -1.04
SMARCAL1-212ENST00000486983 DCDC2BA2VCK2 349 aa8.55□□□□□ -1.04
SMARCAL1-212ENST00000486983 GOLGA6L22H0YM25 854 aa8.55□□□□□ -1.04
SMARCAL1-212ENST00000486983 GRM8O00222 908 aa8.55□□□□□ -1.04
SMARCAL1-212ENST00000486983 GLRX3O76003 335 aaKnown RBP8.55□□□□□ -1.04
SMARCAL1-212ENST00000486983 CD33P20138 364 aa8.55□□□□□ -1.04
SMARCAL1-212ENST00000486983 ZC3H6P61129 1189 aaKnown RBP8.55□□□□□ -1.04
SMARCAL1-212ENST00000486983 LARP1Q6PKG0 1096 aaKnown RBP8.55□□□□□ -1.04
SMARCAL1-212ENST00000486983 KRTAP1-3Q8IUG1 177 aa8.55□□□□□ -1.04
SMARCAL1-212ENST00000486983 CNTROBQ8N137 903 aa8.55□□□□□ -1.04
SMARCAL1-212ENST00000486983 MTMR14Q8NCE2 650 aa8.55□□□□□ -1.04
SMARCAL1-212ENST00000486983 GPATCH3Q96I76 525 aa8.55□□□□□ -1.04
SMARCAL1-212ENST00000486983 NLRP2Q9NX02 1062 aa8.55□□□□□ -1.04
SMARCAL1-212ENST00000486983 C9orf78Q9NZ63 289 aaPredicted RBP8.55□□□□□ -1.04
SMARCAL1-212ENST00000486983 RAD50Q92878 1312 aa8.54□□□□□ -1.04
SMARCAL1-212ENST00000486983 PAPPAQ13219 1627 aa8.54□□□□□ -1.04
SMARCAL1-212ENST00000486983 ATXN7O15265 892 aaPredicted RBP8.54□□□□□ -1.04
SMARCAL1-212ENST00000486983 GATA4P43694 442 aa8.54□□□□□ -1.04
SMARCAL1-212ENST00000486983 CUL4AQ13619 759 aa8.54□□□□□ -1.04
SMARCAL1-212ENST00000486983 PROSER3Q2NL68 480 aa8.54□□□□□ -1.04
SMARCAL1-212ENST00000486983 FOXD4L6Q3SYB3 417 aaPredicted RBP8.54□□□□□ -1.04
SMARCAL1-212ENST00000486983 POTEAQ6S8J7 498 aa8.54□□□□□ -1.04
SMARCAL1-212ENST00000486983 FOXD4L3Q6VB84 417 aaPredicted RBP8.54□□□□□ -1.04
SMARCAL1-212ENST00000486983 NLRP8Q86W28 1048 aa8.54□□□□□ -1.04
SMARCAL1-212ENST00000486983 CLASRPQ8N2M8 674 aaKnown RBP8.54□□□□□ -1.04
SMARCAL1-212ENST00000486983 INTS4Q96HW7 963 aaKnown RBP8.54□□□□□ -1.04
SMARCAL1-212ENST00000486983 NDUFB9Q9Y6M9 179 aa8.54□□□□□ -1.04
SMARCAL1-212ENST00000486983 ABCA3Q99758 1704 aa8.54□□□□□ -1.04
SMARCAL1-212ENST00000486983 WDR17Q8IZU2 1322 aa8.54□□□□□ -1.04
SMARCAL1-212ENST00000486983 COL5A2P05997 1499 aaPredicted RBP8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 SGSM2O43147 1006 aa8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 SNRPA1P09661 255 aaKnown RBP8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 MAPTP10636 758 aaKnown RBP8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 HSPA4P34932 840 aa8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 NEXNQ0ZGT2 675 aa8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 RSPO4Q2I0M5 234 aaPredicted RBP8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 TSGA10IPQ3SY00 556 aa8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 FAM182BQ5T319 152 aa8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 BRINP3Q76B58 766 aa8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 LRP10Q7Z4F1 713 aa8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 TTC5Q8N0Z6 440 aa8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 RILPL2Q969X0 211 aa8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 FMNL2Q96PY5 1086 aa8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 IL1RAPL2Q9NP60 686 aa8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 ANO2Q9NQ90 1003 aa8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 SLAIN2Q9P270 581 aa8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 UBR2Q8IWV8 1755 aa8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 PCDH11XQ9BZA7 1347 aa8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 PCDH11YQ9BZA8 1340 aa8.53□□□□□ -1.04
SMARCAL1-212ENST00000486983 RFX7Q2KHR2 1363 aa8.52□□□□□ -1.05
SMARCAL1-212ENST00000486983 GOLGA6L3A6NEY3 463 aa8.52□□□□□ -1.05
SMARCAL1-212ENST00000486983 HIP1O00291 1037 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms