RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 IARSP41252 1262 aaKnown RBP20.87■□□□□ 0.93
PDLIM7-207ENST00000486828 TDO2P48775 406 aa20.87■□□□□ 0.93
PDLIM7-207ENST00000486828 CCDC186Q7Z3E2 898 aa20.87■□□□□ 0.93
PDLIM7-207ENST00000486828 VPS37DQ86XT2 251 aa20.87■□□□□ 0.93
PDLIM7-207ENST00000486828 PHKBQ93100 1093 aa20.87■□□□□ 0.93
PDLIM7-207ENST00000486828 SDF4Q9BRK5 362 aa20.87■□□□□ 0.93
PDLIM7-207ENST00000486828 LRP2BPQ9P2M1 347 aa20.87■□□□□ 0.93
PDLIM7-207ENST00000486828 SLC12A7Q9Y666 1083 aa20.87■□□□□ 0.93
PDLIM7-207ENST00000486828 COL4A1P02462 1669 aa20.87■□□□□ 0.93
PDLIM7-207ENST00000486828 ZNF831Q5JPB2 1677 aa20.87■□□□□ 0.93
PDLIM7-207ENST00000486828 CCDC69A6NI79 296 aa20.86■□□□□ 0.93
PDLIM7-207ENST00000486828 RANBP6O60518 1105 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-207ENST00000486828 SLC39A14Q15043 492 aa20.86■□□□□ 0.93
PDLIM7-207ENST00000486828 AXDND1Q5T1B0 1012 aaPredicted RBP20.86■□□□□ 0.93
PDLIM7-207ENST00000486828 CCDC144CPQ8IYA2 1237 aa20.86■□□□□ 0.93
PDLIM7-207ENST00000486828 CEP57L1Q8IYX8 460 aa20.86■□□□□ 0.93
PDLIM7-207ENST00000486828 KCNQ2O43526 872 aa20.86■□□□□ 0.93
PDLIM7-207ENST00000486828 RRP9O43818 475 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-207ENST00000486828 DHX40Q8IX18 779 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-207ENST00000486828 MYL10Q9BUA6 226 aa20.86■□□□□ 0.93
PDLIM7-207ENST00000486828 ZNF804BA4D1E1 1349 aa20.85■□□□□ 0.93
PDLIM7-207ENST00000486828 CMA1P23946 247 aa20.85■□□□□ 0.93
PDLIM7-207ENST00000486828 PRIMPOLQ96LW4 560 aa20.85■□□□□ 0.93
PDLIM7-207ENST00000486828 MTA3Q9BTC8 594 aa20.85■□□□□ 0.93
PDLIM7-207ENST00000486828 CLIP2Q9UDT6 1046 aa20.85■□□□□ 0.93
PDLIM7-207ENST00000486828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.84■□□□□ 0.93
PDLIM7-207ENST00000486828 BECN2A8MW95 431 aa20.84■□□□□ 0.93
PDLIM7-207ENST00000486828 TRIM29Q14134 588 aa20.84■□□□□ 0.93
PDLIM7-207ENST00000486828 NAT10Q9H0A0 1025 aaKnown RBP20.84■□□□□ 0.93
PDLIM7-207ENST00000486828 KIAA1468Q9P260 1216 aa20.84■□□□□ 0.93
PDLIM7-207ENST00000486828 NRBP1Q9UHY1 535 aa20.84■□□□□ 0.93
PDLIM7-207ENST00000486828 A0A1B0GUL6 1792 aa20.84■□□□□ 0.93
PDLIM7-207ENST00000486828 FMNL1O95466 1100 aaPredicted RBP20.84■□□□□ 0.93
PDLIM7-207ENST00000486828 U2AF2P26368 475 aaKnown RBP eCLIP20.84■□□□□ 0.932e-9■■■□□ 16.8
PDLIM7-207ENST00000486828 SSRP1Q08945 709 aaKnown RBP20.84■□□□□ 0.93
PDLIM7-207ENST00000486828 GNL2Q13823 731 aaKnown RBP20.84■□□□□ 0.93
PDLIM7-207ENST00000486828 SF3B3Q15393 1217 aaKnown RBP20.84■□□□□ 0.93
PDLIM7-207ENST00000486828 ERFEQ4G0M1 354 aa20.84■□□□□ 0.93
PDLIM7-207ENST00000486828 ANKRD18AQ8IVF6 992 aa20.84■□□□□ 0.93
PDLIM7-207ENST00000486828 MIGA1Q8NAN2 632 aa20.84■□□□□ 0.93
PDLIM7-207ENST00000486828 MRFAP1L1Q96HT8 127 aa20.84■□□□□ 0.93
PDLIM7-207ENST00000486828 DYNC1I1O14576 645 aa20.83■□□□□ 0.93
PDLIM7-207ENST00000486828 PPP6R2O75170 966 aa20.83■□□□□ 0.93
PDLIM7-207ENST00000486828 SART3Q15020 963 aaKnown RBP20.83■□□□□ 0.93
PDLIM7-207ENST00000486828 ERCC4Q92889 916 aaPredicted RBP20.83■□□□□ 0.93
PDLIM7-207ENST00000486828 RNF41Q9H4P4 317 aaPredicted RBP20.83■□□□□ 0.93
PDLIM7-207ENST00000486828 A0A087WWV3 80 aa20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 WDHD1O75717 1129 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 ZNF202O95125 648 aa20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 PFKFB1P16118 471 aa20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 IFNAR1P17181 557 aa20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 CYP7A1P22680 504 aa20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 UBE4AQ14139 1066 aa20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 FAM196AQ6ZSG2 479 aa20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 LINC00116Q8NCU8 138 aa20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 WASF1Q92558 559 aa20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 SLC26A6Q9BXS9 759 aa20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 GNL3LQ9NVN8 582 aaKnown RBP20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 HSP90AA2PQ14568 343 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 WTAPQ15007 396 aa20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 PTPAQ15257 358 aa20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 RRP12Q5JTH9 1297 aaKnown RBP20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 JMYQ8N9B5 988 aa20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 MYRIPQ8NFW9 859 aa20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 TOMM22Q9NS69 142 aa20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 BSDC1Q9NW68 430 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-207ENST00000486828 PPARAQ07869 468 aa20.81■□□□□ 0.92
PDLIM7-207ENST00000486828 C3orf67Q6ZVT6 689 aa20.81■□□□□ 0.92
PDLIM7-207ENST00000486828 PTF1AQ7RTS3 328 aa20.81■□□□□ 0.92
PDLIM7-207ENST00000486828 AOPEPQ8N6M6 819 aa20.81■□□□□ 0.92
PDLIM7-207ENST00000486828 MAP3K14Q99558 947 aa20.81■□□□□ 0.92
PDLIM7-207ENST00000486828 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.81■□□□□ 0.92
PDLIM7-207ENST00000486828 IQSEC3Q9UPP2 1182 aaPredicted RBP20.81■□□□□ 0.92
PDLIM7-207ENST00000486828 MROH7-TTC4A0A0A0MT08 1334 aa20.81■□□□□ 0.92
PDLIM7-207ENST00000486828 ERICH2A1L162 156 aa20.8■□□□□ 0.92
PDLIM7-207ENST00000486828 RGL2O15211 777 aa20.8■□□□□ 0.92
PDLIM7-207ENST00000486828 SLC3A2P08195 630 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-207ENST00000486828 MARCKSP29966 332 aaPredicted RBP20.8■□□□□ 0.92
PDLIM7-207ENST00000486828 GYG1P46976 350 aa20.8■□□□□ 0.92
PDLIM7-207ENST00000486828 ADGRA1Q86SQ6 560 aa20.8■□□□□ 0.92
PDLIM7-207ENST00000486828 TMTC2Q8N394 836 aa20.8■□□□□ 0.92
PDLIM7-207ENST00000486828 TIGD1Q96MW7 591 aa20.8■□□□□ 0.92
PDLIM7-207ENST00000486828 BPIFA3Q9BQP9 254 aa20.8■□□□□ 0.92
PDLIM7-207ENST00000486828 COL1A1P02452 1464 aaPredicted RBP20.8■□□□□ 0.92
PDLIM7-207ENST00000486828 RCAN1P53805 252 aa20.8■□□□□ 0.92
PDLIM7-207ENST00000486828 LRMPQ12912 555 aa20.8■□□□□ 0.92
PDLIM7-207ENST00000486828 ZRSR1Q15695 479 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-207ENST00000486828 RTN1Q16799 776 aa20.8■□□□□ 0.92
PDLIM7-207ENST00000486828 ABCF2Q9UG63 623 aa20.8■□□□□ 0.92
PDLIM7-207ENST00000486828 ANAPC4Q9UJX5 808 aa20.8■□□□□ 0.92
PDLIM7-207ENST00000486828 CASZ1Q86V15 1759 aa20.8■□□□□ 0.92
PDLIM7-207ENST00000486828 MAGEB6P1A0A0J9YX57 407 aa20.79■□□□□ 0.92
PDLIM7-207ENST00000486828 CCDC144BQ3MJ40 725 aa20.79■□□□□ 0.92
PDLIM7-207ENST00000486828 ZKSCAN3Q9BRR0 538 aa20.79■□□□□ 0.92
PDLIM7-207ENST00000486828 RAI14Q9P0K7 980 aa20.79■□□□□ 0.92
PDLIM7-207ENST00000486828 HPSEQ9Y251 543 aa20.79■□□□□ 0.92
PDLIM7-207ENST00000486828 SCN7AQ01118 1682 aa20.79■□□□□ 0.92
PDLIM7-207ENST00000486828 NHSQ6T4R5 1651 aa20.79■□□□□ 0.92
PDLIM7-207ENST00000486828 SBF2Q86WG5 1849 aa20.79■□□□□ 0.92
PDLIM7-207ENST00000486828 FAM237AA0A1B0GTK4 181 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms