RNA–Protein interactions for RNA: ENST00000486509.1

CDC7-204, Transcript of cell division cycle 7, humanhuman

TSL 3

Gene CDC7, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-204ENST00000486509 GIPC2Q8TF65 315 aa6.65□□□□□ -1.34
CDC7-204ENST00000486509 EZH1Q92800 747 aaPredicted RBP6.65□□□□□ -1.34
CDC7-204ENST00000486509 CBX8Q9HC52 389 aa6.65□□□□□ -1.34
CDC7-204ENST00000486509 CRIM1Q9NZV1 1036 aa6.65□□□□□ -1.34
CDC7-204ENST00000486509 ABCC8Q09428 1581 aa6.65□□□□□ -1.35
CDC7-204ENST00000486509 SORBS3O60504 671 aa6.64□□□□□ -1.35
CDC7-204ENST00000486509 IGLV1-40P01703 118 aa6.64□□□□□ -1.35
CDC7-204ENST00000486509 USP11P51784 963 aa6.64□□□□□ -1.35
CDC7-204ENST00000486509 RNF43Q68DV7 783 aa6.64□□□□□ -1.35
CDC7-204ENST00000486509 ACSS3Q9H6R3 686 aa6.64□□□□□ -1.35
CDC7-204ENST00000486509 SAMM50Q9Y512 469 aa6.64□□□□□ -1.35
CDC7-204ENST00000486509 TRIM37O94972 964 aa6.63□□□□□ -1.35
CDC7-204ENST00000486509 SLFN14P0C7P3 912 aa6.63□□□□□ -1.35
CDC7-204ENST00000486509 RXRBP28702 533 aa6.63□□□□□ -1.35
CDC7-204ENST00000486509 ASPAP45381 313 aa6.63□□□□□ -1.35
CDC7-204ENST00000486509 ID3Q02535 119 aa6.63□□□□□ -1.35
CDC7-204ENST00000486509 NFIAQ12857 509 aa6.63□□□□□ -1.35
CDC7-204ENST00000486509 CCDC85BQ15834 202 aaPredicted RBP6.63□□□□□ -1.35
CDC7-204ENST00000486509 LLGL2Q6P1M3 1020 aa6.63□□□□□ -1.35
CDC7-204ENST00000486509 USP31Q70CQ4 1352 aa6.63□□□□□ -1.35
CDC7-204ENST00000486509 FANCD2OSQ96PS1 177 aa6.63□□□□□ -1.35
CDC7-204ENST00000486509 SEMA6CQ9H3T2 930 aa6.63□□□□□ -1.35
CDC7-204ENST00000486509 DISC1Q9NRI5 854 aa6.63□□□□□ -1.35
CDC7-204ENST00000486509 CYP8B1Q9UNU6 501 aa6.63□□□□□ -1.35
CDC7-204ENST00000486509 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.62□□□□□ -1.35
CDC7-204ENST00000486509 FAM95CA0A1B0GW59 222 aa6.62□□□□□ -1.35
CDC7-204ENST00000486509 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.62□□□□□ -1.35
CDC7-204ENST00000486509 NFICP08651 508 aa6.62□□□□□ -1.35
CDC7-204ENST00000486509 RAB6AP20340 208 aa6.62□□□□□ -1.35
CDC7-204ENST00000486509 PTPN11Q06124 597 aaPredicted RBP6.62□□□□□ -1.35
CDC7-204ENST00000486509 LRRC14Q15048 493 aa6.62□□□□□ -1.35
CDC7-204ENST00000486509 TAF1CQ15572 869 aaPredicted RBP6.62□□□□□ -1.35
CDC7-204ENST00000486509 ZC3H12AQ5D1E8 599 aaKnown RBP6.62□□□□□ -1.35
CDC7-204ENST00000486509 TTBK2Q6IQ55 1244 aa6.62□□□□□ -1.35
CDC7-204ENST00000486509 SLC51AQ86UW1 340 aa6.62□□□□□ -1.35
CDC7-204ENST00000486509 SHISA5Q8N114 240 aa6.62□□□□□ -1.35
CDC7-204ENST00000486509 CRELD1Q96HD1 420 aa6.62□□□□□ -1.35
CDC7-204ENST00000486509 CLASP1Q7Z460 1538 aa6.61□□□□□ -1.35
CDC7-204ENST00000486509 TOPBP1Q92547 1522 aa6.61□□□□□ -1.35
CDC7-204ENST00000486509 GSC2O15499 205 aa6.61□□□□□ -1.35
CDC7-204ENST00000486509 ZNF16P17020 682 aaPredicted RBP6.61□□□□□ -1.35
CDC7-204ENST00000486509 ST13P50502 369 aaKnown RBP6.61□□□□□ -1.35
CDC7-204ENST00000486509 MRPL58Q14197 206 aaKnown RBP6.61□□□□□ -1.35
CDC7-204ENST00000486509 NFKBIBQ15653 356 aa6.61□□□□□ -1.35
CDC7-204ENST00000486509 ZMYM1Q5SVZ6 1142 aa6.61□□□□□ -1.35
CDC7-204ENST00000486509 SEZ6L2Q6UXD5 910 aa6.61□□□□□ -1.35
CDC7-204ENST00000486509 ZDHHC13Q8IUH4 622 aa6.61□□□□□ -1.35
CDC7-204ENST00000486509 GAL3ST3Q96A11 431 aa6.61□□□□□ -1.35
CDC7-204ENST00000486509 MFSD14AQ96MC6 490 aa6.61□□□□□ -1.35
CDC7-204ENST00000486509 DBNDD2Q9BQY9 259 aa6.61□□□□□ -1.35
CDC7-204ENST00000486509 MRS2Q9HD23 443 aa6.61□□□□□ -1.35
CDC7-204ENST00000486509 VTI1BQ9UEU0 232 aa6.61□□□□□ -1.35
CDC7-204ENST00000486509 WDR97A6NE52 1622 aa6.61□□□□□ -1.35
CDC7-204ENST00000486509 TARBP1Q13395 1621 aaKnown RBP6.61□□□□□ -1.35
CDC7-204ENST00000486509 TOP2AP11388 1531 aaKnown RBP6.6□□□□□ -1.35
CDC7-204ENST00000486509 DYNC1LI2O43237 492 aaPredicted RBP6.6□□□□□ -1.35
CDC7-204ENST00000486509 NEFMP07197 916 aa6.6□□□□□ -1.35
CDC7-204ENST00000486509 ADMP35318 185 aa6.6□□□□□ -1.35
CDC7-204ENST00000486509 LIG3P49916 1009 aa6.6□□□□□ -1.35
CDC7-204ENST00000486509 TTLL4Q14679 1199 aa6.6□□□□□ -1.35
CDC7-204ENST00000486509 MAP3K11Q16584 847 aa6.6□□□□□ -1.35
CDC7-204ENST00000486509 ZNF326Q5BKZ1 582 aaKnown RBP6.6□□□□□ -1.35
CDC7-204ENST00000486509 SCARA3Q6AZY7 606 aa6.6□□□□□ -1.35
CDC7-204ENST00000486509 SHKBP1Q8TBC3 707 aa6.6□□□□□ -1.35
CDC7-204ENST00000486509 GATA6Q92908 595 aa6.6□□□□□ -1.35
CDC7-204ENST00000486509 ACSBG1Q96GR2 724 aa6.6□□□□□ -1.35
CDC7-204ENST00000486509 NOC4LQ9BVI4 516 aaKnown RBP6.6□□□□□ -1.35
CDC7-204ENST00000486509 YIPF2Q9BWQ6 316 aa6.6□□□□□ -1.35
CDC7-204ENST00000486509 KRTAP9-2Q9BYQ4 174 aa6.6□□□□□ -1.35
CDC7-204ENST00000486509 ATXN3LQ9H3M9 355 aa6.6□□□□□ -1.35
CDC7-204ENST00000486509 PRKAG2Q9UGJ0 569 aa6.6□□□□□ -1.35
CDC7-204ENST00000486509 RNF112Q9ULX5 631 aa6.6□□□□□ -1.35
CDC7-204ENST00000486509 PCDHB5Q9Y5E4 795 aa6.6□□□□□ -1.35
CDC7-204ENST00000486509 PRR19A6NJB7 356 aa6.59□□□□□ -1.35
CDC7-204ENST00000486509 RPS26P62854 115 aaKnown RBP6.59□□□□□ -1.35
CDC7-204ENST00000486509 ERVK-24P63145 666 aa6.59□□□□□ -1.35
CDC7-204ENST00000486509 HNRNPUQ00839 825 aaKnown RBP eCLIP6.59□□□□□ -1.35
CDC7-204ENST00000486509 RING1Q06587 406 aa6.59□□□□□ -1.35
CDC7-204ENST00000486509 PAOXQ6QHF9 649 aa6.59□□□□□ -1.35
CDC7-204ENST00000486509 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.59□□□□□ -1.35
CDC7-204ENST00000486509 AGMOQ6ZNB7 445 aa6.59□□□□□ -1.35
CDC7-204ENST00000486509 C1GALT1Q9NS00 363 aa6.59□□□□□ -1.35
CDC7-204ENST00000486509 PCDHA4Q9UN74 947 aa6.59□□□□□ -1.35
CDC7-204ENST00000486509 DAGLAQ9Y4D2 1042 aa6.59□□□□□ -1.35
CDC7-204ENST00000486509 CSADQ9Y600 493 aa6.59□□□□□ -1.35
CDC7-204ENST00000486509 DNMBPQ6XZF7 1577 aa6.59□□□□□ -1.35
CDC7-204ENST00000486509 SYNJ1O43426 1573 aa6.58□□□□□ -1.36
CDC7-204ENST00000486509 KRTAP9-6A0A140TA67 174 aa6.58□□□□□ -1.36
CDC7-204ENST00000486509 DCDC2CA8MYV0 355 aa6.58□□□□□ -1.36
CDC7-204ENST00000486509 TGFB1P01137 390 aa6.58□□□□□ -1.36
CDC7-204ENST00000486509 F13BP05160 661 aa6.58□□□□□ -1.36
CDC7-204ENST00000486509 HCLS1P14317 486 aaPredicted RBP6.58□□□□□ -1.36
CDC7-204ENST00000486509 NTF4P34130 210 aa6.58□□□□□ -1.36
CDC7-204ENST00000486509 MAP7Q14244 749 aa6.58□□□□□ -1.36
CDC7-204ENST00000486509 INPP5AQ14642 412 aa6.58□□□□□ -1.36
CDC7-204ENST00000486509 C12orf40Q86WS4 652 aa6.58□□□□□ -1.36
CDC7-204ENST00000486509 LGR6Q9HBX8 967 aa6.58□□□□□ -1.36
CDC7-204ENST00000486509 WDR64B1ANS9 1081 aa6.57□□□□□ -1.36
CDC7-204ENST00000486509 TFE3P19532 575 aaPredicted RBP6.57□□□□□ -1.36
CDC7-204ENST00000486509 CDK8P49336 464 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms