RNA–Protein interactions for RNA: ENST00000486509.1

CDC7-204, Transcript of cell division cycle 7, humanhuman

TSL 3

Gene CDC7, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-204ENST00000486509 AEBP2Q6ZN18 517 aaPredicted RBP21.86■■□□□ 1.09
CDC7-204ENST00000486509 CHIC1Q5VXU3 224 aa21.24■□□□□ 0.99
CDC7-204ENST00000486509 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
CDC7-204ENST00000486509 SENP3Q9H4L4 574 aaPredicted RBP18.48■□□□□ 0.55
CDC7-204ENST00000486509 FOXD1Q16676 465 aa17.21■□□□□ 0.35
CDC7-204ENST00000486509 PLPPR3Q6T4P5 718 aa17.18■□□□□ 0.34
CDC7-204ENST00000486509 PPP6R1Q9UPN7 881 aa16.54■□□□□ 0.24
CDC7-204ENST00000486509 ADRA2BP18089 450 aa16.49■□□□□ 0.23
CDC7-204ENST00000486509 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
CDC7-204ENST00000486509 PIAS4Q8N2W9 510 aaPredicted RBP16.18■□□□□ 0.18
CDC7-204ENST00000486509 MSH5O43196 834 aa15.83■□□□□ 0.12
CDC7-204ENST00000486509 PPP4R3CPQ6ZMV5 832 aa15.16■□□□□ 0.02
CDC7-204ENST00000486509 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
CDC7-204ENST00000486509 MAPK8IP2Q13387 824 aaPredicted RBP15□□□□□ -0.01
CDC7-204ENST00000486509 DMRT2Q9Y5R5 561 aa14.77□□□□□ -0.05
CDC7-204ENST00000486509 KCNA4P22459 653 aa14.76□□□□□ -0.05
CDC7-204ENST00000486509 CNKSR2Q8WXI2 1034 aa14.73□□□□□ -0.05
CDC7-204ENST00000486509 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
CDC7-204ENST00000486509 NPM3O75607 178 aaKnown RBP14.54□□□□□ -0.08
CDC7-204ENST00000486509 RNF216Q9NWF9 866 aaPredicted RBP14.46□□□□□ -0.09
CDC7-204ENST00000486509 HOXD11P31277 338 aaPredicted RBP14.44□□□□□ -0.1
CDC7-204ENST00000486509 DNAJC5BQ9UF47 199 aa14.13□□□□□ -0.15
CDC7-204ENST00000486509 DCAF8L1A6NGE4 600 aa14.08□□□□□ -0.16
CDC7-204ENST00000486509 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
CDC7-204ENST00000486509 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
CDC7-204ENST00000486509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.72□□□□□ -0.21
CDC7-204ENST00000486509 ZBTB22O15209 634 aa13.61□□□□□ -0.23
CDC7-204ENST00000486509 RNF39Q9H2S5 420 aa13.6□□□□□ -0.23
CDC7-204ENST00000486509 FOXD4L1Q9NU39 408 aa13.56□□□□□ -0.24
CDC7-204ENST00000486509 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
CDC7-204ENST00000486509 EHMT2Q96KQ7 1210 aa13.54□□□□□ -0.24
CDC7-204ENST00000486509 U3KPZ7 1027 aaPredicted RBP13.54□□□□□ -0.24
CDC7-204ENST00000486509 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
CDC7-204ENST00000486509 MYCNP04198 464 aaPredicted RBP13.4□□□□□ -0.26
CDC7-204ENST00000486509 C1QBPQ07021 282 aaKnown RBP13.4□□□□□ -0.26
CDC7-204ENST00000486509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.26□□□□□ -0.29
CDC7-204ENST00000486509 HNRNPUL2Q1KMD3 747 aaKnown RBP13.26□□□□□ -0.29
CDC7-204ENST00000486509 SAMD1Q6SPF0 538 aaPredicted RBP13.24□□□□□ -0.29
CDC7-204ENST00000486509 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
CDC7-204ENST00000486509 APLP2Q06481 763 aa13.12□□□□□ -0.31
CDC7-204ENST00000486509 ATF5Q9Y2D1 282 aaPredicted RBP13.12□□□□□ -0.31
CDC7-204ENST00000486509 ATXN8OSP0DMR3 200 aa13.09□□□□□ -0.31
CDC7-204ENST00000486509 CAPN15O75808 1086 aa13.08□□□□□ -0.32
CDC7-204ENST00000486509 TRHP20396 242 aaPredicted RBP13.01□□□□□ -0.33
CDC7-204ENST00000486509 ZNF219Q9P2Y4 722 aaPredicted RBP12.99□□□□□ -0.33
CDC7-204ENST00000486509 DSG3P32926 999 aa12.93□□□□□ -0.34
CDC7-204ENST00000486509 ABCB7O75027 752 aa12.86□□□□□ -0.35
CDC7-204ENST00000486509 POLA2Q14181 598 aa12.81□□□□□ -0.36
CDC7-204ENST00000486509 POTEHQ6S545 545 aa12.56□□□□□ -0.4
CDC7-204ENST00000486509 MKRN4PQ13434 485 aaPredicted RBP12.54□□□□□ -0.4
CDC7-204ENST00000486509 ZBTB12Q9Y330 459 aaPredicted RBP12.53□□□□□ -0.4
CDC7-204ENST00000486509 FBLN2P98095 1184 aa12.47□□□□□ -0.41
CDC7-204ENST00000486509 OSCARQ8IYS5 282 aa12.38□□□□□ -0.43
CDC7-204ENST00000486509 RBM42Q9BTD8 480 aaKnown RBP12.25□□□□□ -0.45
CDC7-204ENST00000486509 SPDYE2BA6NHP3 402 aa12.23□□□□□ -0.45
CDC7-204ENST00000486509 SPDYE6P0CI01 402 aa12.23□□□□□ -0.45
CDC7-204ENST00000486509 SPDYE2Q495Y8 402 aa12.23□□□□□ -0.45
CDC7-204ENST00000486509 ZNF692Q9BU19 519 aaPredicted RBP12.17□□□□□ -0.46
CDC7-204ENST00000486509 SPDYE4A6NLX3 237 aa12.16□□□□□ -0.46
CDC7-204ENST00000486509 SSUH2Q9Y2M2 353 aa12.16□□□□□ -0.46
CDC7-204ENST00000486509 FKBP8Q14318 412 aa12.12□□□□□ -0.47
CDC7-204ENST00000486509 AKT1S1Q96B36 256 aa12.12□□□□□ -0.47
CDC7-204ENST00000486509 PABPN1Q86U42 306 aaKnown RBP eCLIP12.02□□□□□ -0.49
CDC7-204ENST00000486509 REM2Q8IYK8 340 aaPredicted RBP12.02□□□□□ -0.49
CDC7-204ENST00000486509 PROM2Q8N271 834 aa12.01□□□□□ -0.49
CDC7-204ENST00000486509 PITPNM1O00562 1244 aa11.89□□□□□ -0.51
CDC7-204ENST00000486509 SPDYE1Q8NFV5 336 aaPredicted RBP11.87□□□□□ -0.51
CDC7-204ENST00000486509 CLEC11AQ9Y240 323 aa11.82□□□□□ -0.52
CDC7-204ENST00000486509 CHRDL2Q6WN34 429 aa11.8□□□□□ -0.52
CDC7-204ENST00000486509 STAG3Q9UJ98 1225 aa11.77□□□□□ -0.53
CDC7-204ENST00000486509 PRR29P0C7W0 189 aa11.7□□□□□ -0.54
CDC7-204ENST00000486509 FXR2P51116 673 aaKnown RBP eCLIP11.69□□□□□ -0.54
CDC7-204ENST00000486509 FBXO3Q9UK99 471 aa11.67□□□□□ -0.54
CDC7-204ENST00000486509 PIP4P2Q8N4L2 257 aa11.66□□□□□ -0.54
CDC7-204ENST00000486509 CREBZFQ9NS37 354 aa11.6□□□□□ -0.55
CDC7-204ENST00000486509 CHADLQ6NUI6 762 aa11.59□□□□□ -0.55
CDC7-204ENST00000486509 PRKAR2AP13861 404 aaKnown RBP11.58□□□□□ -0.56
CDC7-204ENST00000486509 VASPP50552 380 aaPredicted RBP11.55□□□□□ -0.56
CDC7-204ENST00000486509 MIER1Q8N108 512 aa11.53□□□□□ -0.56
CDC7-204ENST00000486509 MNX1P50219 401 aaPredicted RBP11.49□□□□□ -0.57
CDC7-204ENST00000486509 PLCD3Q8N3E9 789 aa11.49□□□□□ -0.57
CDC7-204ENST00000486509 FARP1Q9Y4F1 1045 aaPredicted RBP11.45□□□□□ -0.58
CDC7-204ENST00000486509 IFNLR1Q8IU57 520 aaPredicted RBP11.42□□□□□ -0.58
CDC7-204ENST00000486509 PLEKHG5O94827 1062 aa11.41□□□□□ -0.58
CDC7-204ENST00000486509 SP7Q8TDD2 431 aaPredicted RBP11.37□□□□□ -0.59
CDC7-204ENST00000486509 ZBTB47Q9UFB7 747 aaPredicted RBP11.34□□□□□ -0.59
CDC7-204ENST00000486509 NPM1P06748 294 aaKnown RBP eCLIP11.33□□□□□ -0.6
CDC7-204ENST00000486509 KLHL34Q8N239 644 aa11.33□□□□□ -0.6
CDC7-204ENST00000486509 C19orf67A6NJJ6 358 aa11.29□□□□□ -0.6
CDC7-204ENST00000486509 NUBP1P53384 320 aa11.29□□□□□ -0.6
CDC7-204ENST00000486509 HAX1O00165 279 aa11.26□□□□□ -0.61
CDC7-204ENST00000486509 RASEFQ8IZ41 740 aa11.26□□□□□ -0.61
CDC7-204ENST00000486509 EVX2Q03828 476 aa11.25□□□□□ -0.61
CDC7-204ENST00000486509 SPOCK2Q92563 424 aa11.25□□□□□ -0.61
CDC7-204ENST00000486509 CD44P16070 742 aaKnown RBP11.23□□□□□ -0.61
CDC7-204ENST00000486509 TSPYL2Q9H2G4 693 aaPredicted RBP11.18□□□□□ -0.62
CDC7-204ENST00000486509 ZRANB1Q9UGI0 708 aa11.16□□□□□ -0.62
CDC7-204ENST00000486509 FAM212AQ96EL1 285 aa11.14□□□□□ -0.63
CDC7-204ENST00000486509 PAK3O75914 559 aaPredicted RBP11.13□□□□□ -0.63
CDC7-204ENST00000486509 DCAF8Q5TAQ9 597 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms