RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 MYH1P12882 1939 aa24.27■■□□□ 1.48
VCPKMT-203ENST00000484763 MINDY4BA8MYZ0 360 aa24.26■■□□□ 1.47
VCPKMT-203ENST00000484763 USP17L12C9JPN9 530 aa24.26■■□□□ 1.47
VCPKMT-203ENST00000484763 USP17L21D6R901 530 aa24.26■■□□□ 1.47
VCPKMT-203ENST00000484763 HMGB1P09429 215 aaKnown RBP24.26■■□□□ 1.47
VCPKMT-203ENST00000484763 SBK1Q52WX2 424 aa24.26■■□□□ 1.47
VCPKMT-203ENST00000484763 MAPKAPK5Q8IW41 473 aa24.26■■□□□ 1.47
VCPKMT-203ENST00000484763 HSCBQ8IWL3 235 aa24.26■■□□□ 1.47
VCPKMT-203ENST00000484763 RNF181Q9P0P0 153 aa24.26■■□□□ 1.47
VCPKMT-203ENST00000484763 GJA3Q9Y6H8 435 aa24.26■■□□□ 1.47
VCPKMT-203ENST00000484763 AMOTL1Q8IY63 956 aa24.26■■□□□ 1.47
VCPKMT-203ENST00000484763 GRIN3BO60391 1043 aa24.25■■□□□ 1.47
VCPKMT-203ENST00000484763 WDHD1O75717 1129 aaPredicted RBP24.25■■□□□ 1.47
VCPKMT-203ENST00000484763 CPA1P15085 419 aa24.25■■□□□ 1.47
VCPKMT-203ENST00000484763 CTDSPL2Q05D32 466 aa24.25■■□□□ 1.47
VCPKMT-203ENST00000484763 DPF2Q92785 391 aa24.25■■□□□ 1.47
VCPKMT-203ENST00000484763 TBC1D2Q9BYX2 928 aa24.25■■□□□ 1.47
VCPKMT-203ENST00000484763 SPDYE2BA6NHP3 402 aa24.24■■□□□ 1.47
VCPKMT-203ENST00000484763 CD2BP2O95400 341 aaKnown RBP24.24■■□□□ 1.47
VCPKMT-203ENST00000484763 SPDYE6P0CI01 402 aa24.24■■□□□ 1.47
VCPKMT-203ENST00000484763 RPS6KB1P23443 525 aa24.24■■□□□ 1.47
VCPKMT-203ENST00000484763 GMPSP49915 693 aaPredicted RBP24.24■■□□□ 1.47
VCPKMT-203ENST00000484763 TRDNQ13061 729 aa24.24■■□□□ 1.47
VCPKMT-203ENST00000484763 DLGAP5Q15398 846 aa24.24■■□□□ 1.47
VCPKMT-203ENST00000484763 AKNAD1Q5T1N1 836 aa24.24■■□□□ 1.47
VCPKMT-203ENST00000484763 MTMR14Q8NCE2 650 aa24.24■■□□□ 1.47
VCPKMT-203ENST00000484763 NCOA7Q8NI08 942 aa24.24■■□□□ 1.47
VCPKMT-203ENST00000484763 STAG1Q8WVM7 1258 aa24.24■■□□□ 1.47
VCPKMT-203ENST00000484763 RALYLQ86SE5 291 aaKnown RBP24.24■■□□□ 1.47
VCPKMT-203ENST00000484763 TTC14Q96N46 770 aa24.24■■□□□ 1.47
VCPKMT-203ENST00000484763 RNF41Q9H4P4 317 aaPredicted RBP24.24■■□□□ 1.47
VCPKMT-203ENST00000484763 CYP2D7A0A087X1C5 515 aa24.23■■□□□ 1.47
VCPKMT-203ENST00000484763 PICALMQ13492 652 aa24.23■■□□□ 1.47
VCPKMT-203ENST00000484763 MFSD6Q6ZSS7 791 aa24.23■■□□□ 1.47
VCPKMT-203ENST00000484763 GPC2Q8N158 579 aa24.23■■□□□ 1.47
VCPKMT-203ENST00000484763 PRMT6Q96LA8 375 aaPredicted RBP24.23■■□□□ 1.47
VCPKMT-203ENST00000484763 PDRG1Q9NUG6 133 aa24.23■■□□□ 1.47
VCPKMT-203ENST00000484763 ZNF280AP59817 542 aaPredicted RBP24.22■■□□□ 1.47
VCPKMT-203ENST00000484763 C9orf131Q5VYM1 1079 aa24.22■■□□□ 1.47
VCPKMT-203ENST00000484763 CNNM2Q9H8M5 875 aa24.22■■□□□ 1.47
VCPKMT-203ENST00000484763 NEDD4P46934 1319 aa24.22■■□□□ 1.47
VCPKMT-203ENST00000484763 SLC3A2P08195 630 aaKnown RBP24.21■■□□□ 1.47
VCPKMT-203ENST00000484763 MCM2P49736 904 aa24.21■■□□□ 1.47
VCPKMT-203ENST00000484763 COL9A3Q14050 684 aaPredicted RBP24.21■■□□□ 1.47
VCPKMT-203ENST00000484763 C12orf60Q5U649 245 aa24.21■■□□□ 1.47
VCPKMT-203ENST00000484763 IDI2Q9BXS1 227 aa24.21■■□□□ 1.47
VCPKMT-203ENST00000484763 MYOZ2Q9NPC6 264 aa24.21■■□□□ 1.47
VCPKMT-203ENST00000484763 DDX4Q9NQI0 724 aaKnown RBP24.21■■□□□ 1.47
VCPKMT-203ENST00000484763 ROBO3Q96MS0 1386 aa24.21■■□□□ 1.47
VCPKMT-203ENST00000484763 POLR3DP05423 398 aaPredicted RBP24.21■■□□□ 1.47
VCPKMT-203ENST00000484763 CYP2D6P10635 497 aa24.21■■□□□ 1.47
VCPKMT-203ENST00000484763 PCP11498 1178 aaKnown RBP24.21■■□□□ 1.47
VCPKMT-203ENST00000484763 DHX32Q7L7V1 743 aaKnown RBP24.21■■□□□ 1.47
VCPKMT-203ENST00000484763 TDRD3Q9H7E2 651 aaKnown RBP24.21■■□□□ 1.47
VCPKMT-203ENST00000484763 SAP30BPQ9UHR5 308 aaKnown RBP24.21■■□□□ 1.47
VCPKMT-203ENST00000484763 MICALL2Q8IY33 904 aa24.2■■□□□ 1.46
VCPKMT-203ENST00000484763 MB21D2Q8IYB1 491 aaPredicted RBP24.2■■□□□ 1.46
VCPKMT-203ENST00000484763 KRT23Q9C075 422 aa24.2■■□□□ 1.46
VCPKMT-203ENST00000484763 OSBPL5Q9H0X9 879 aaPredicted RBP24.2■■□□□ 1.46
VCPKMT-203ENST00000484763 TMOD2Q9NZR1 351 aa24.2■■□□□ 1.46
VCPKMT-203ENST00000484763 DAXXQ9UER7 740 aaPredicted RBP24.2■■□□□ 1.46
VCPKMT-203ENST00000484763 K7ELQ4 463 aaPredicted RBP24.19■■□□□ 1.46
VCPKMT-203ENST00000484763 NPM3O75607 178 aaKnown RBP24.19■■□□□ 1.46
VCPKMT-203ENST00000484763 NFIAQ12857 509 aa24.19■■□□□ 1.46
VCPKMT-203ENST00000484763 ZBED3Q96IU2 234 aaPredicted RBP24.19■■□□□ 1.46
VCPKMT-203ENST00000484763 ALDH8A1Q9H2A2 487 aaPredicted RBP24.19■■□□□ 1.46
VCPKMT-203ENST00000484763 SHTN1A0MZ66 631 aa24.19■■□□□ 1.46
VCPKMT-203ENST00000484763 SMIM22K7EJ46 135 aa24.19■■□□□ 1.46
VCPKMT-203ENST00000484763 MCM5P33992 734 aa24.19■■□□□ 1.46
VCPKMT-203ENST00000484763 AK2P54819 239 aa24.19■■□□□ 1.46
VCPKMT-203ENST00000484763 SLC4A8Q2Y0W8 1093 aa24.19■■□□□ 1.46
VCPKMT-203ENST00000484763 TCEANC2Q96MN5 208 aa24.19■■□□□ 1.46
VCPKMT-203ENST00000484763 CNOT7Q9UIV1 285 aaKnown RBP24.19■■□□□ 1.46
VCPKMT-203ENST00000484763 TACC3Q9Y6A5 838 aa24.19■■□□□ 1.46
VCPKMT-203ENST00000484763 MYO1BO43795 1136 aa24.18■■□□□ 1.46
VCPKMT-203ENST00000484763 CACNB3P54284 484 aa24.18■■□□□ 1.46
VCPKMT-203ENST00000484763 EXOSC10Q01780 885 aaKnown RBP24.18■■□□□ 1.46
VCPKMT-203ENST00000484763 STK11IPQ8N1F8 1099 aa24.18■■□□□ 1.46
VCPKMT-203ENST00000484763 WDR19Q8NEZ3 1342 aa24.17■■□□□ 1.46
VCPKMT-203ENST00000484763 B4E1Z4 1266 aa24.17■■□□□ 1.46
VCPKMT-203ENST00000484763 FGRP09769 529 aa24.17■■□□□ 1.46
VCPKMT-203ENST00000484763 EVX2Q03828 476 aa24.17■■□□□ 1.46
VCPKMT-203ENST00000484763 PDE4BQ07343 736 aa24.17■■□□□ 1.46
VCPKMT-203ENST00000484763 SPDYE2Q495Y8 402 aa24.17■■□□□ 1.46
VCPKMT-203ENST00000484763 INCENPQ9NQS7 918 aa24.17■■□□□ 1.46
VCPKMT-203ENST00000484763 TOMM22Q9NS69 142 aa24.17■■□□□ 1.46
VCPKMT-203ENST00000484763 FAM198AQ9UFP1 575 aa24.17■■□□□ 1.46
VCPKMT-203ENST00000484763 ZC3H4Q9UPT8 1303 aaKnown RBP24.17■■□□□ 1.46
VCPKMT-203ENST00000484763 PLCD1P51178 756 aa24.17■■□□□ 1.46
VCPKMT-203ENST00000484763 ANKRD1Q15327 319 aa24.17■■□□□ 1.46
VCPKMT-203ENST00000484763 ZNF70Q9UC06 446 aaPredicted RBP24.17■■□□□ 1.46
VCPKMT-203ENST00000484763 WNT10BO00744 389 aa24.16■■□□□ 1.46
VCPKMT-203ENST00000484763 RRP12Q5JTH9 1297 aaKnown RBP24.16■■□□□ 1.46
VCPKMT-203ENST00000484763 TTC6Q86TZ1 520 aa24.16■■□□□ 1.46
VCPKMT-203ENST00000484763 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.16■■□□□ 1.46
VCPKMT-203ENST00000484763 COL2A1P02458 1487 aaPredicted RBP24.16■■□□□ 1.46
VCPKMT-203ENST00000484763 CLRN2A0PK11 232 aa24.15■■□□□ 1.46
VCPKMT-203ENST00000484763 H7C1D1 291 aa24.15■■□□□ 1.46
VCPKMT-203ENST00000484763 PRC1O43663 620 aa24.15■■□□□ 1.46
VCPKMT-203ENST00000484763 ORC4O43929 436 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms