RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 ZKSCAN3Q9BRR0 538 aa22.1■■□□□ 1.13
CCM2-214ENST00000481194 ITPK1Q13572 414 aa22.1■■□□□ 1.13
CCM2-214ENST00000481194 NFIXQ14938 502 aa22.1■■□□□ 1.13
CCM2-214ENST00000481194 PDILTQ8N807 584 aa22.1■■□□□ 1.13
CCM2-214ENST00000481194 MINPP1Q9UNW1 487 aa22.1■■□□□ 1.13
CCM2-214ENST00000481194 BCL9O00512 1426 aa22.09■■□□□ 1.13
CCM2-214ENST00000481194 USP42Q9H9J4 1324 aaKnown RBP22.09■■□□□ 1.13
CCM2-214ENST00000481194 SWAP70Q9UH65 585 aa22.09■■□□□ 1.13
CCM2-214ENST00000481194 CSF1RP07333 972 aa22.09■■□□□ 1.13
CCM2-214ENST00000481194 DOK7Q18PE1 504 aa22.09■■□□□ 1.13
CCM2-214ENST00000481194 GTPBP4Q9BZE4 634 aaKnown RBP22.09■■□□□ 1.13
CCM2-214ENST00000481194 CPA1P15085 419 aa22.09■■□□□ 1.13
CCM2-214ENST00000481194 MRPS27Q92552 414 aaKnown RBP22.09■■□□□ 1.13
CCM2-214ENST00000481194 USP17L12C9JPN9 530 aa22.08■■□□□ 1.13
CCM2-214ENST00000481194 USP17L21D6R901 530 aa22.08■■□□□ 1.13
CCM2-214ENST00000481194 FGAP02671 866 aa22.08■■□□□ 1.13
CCM2-214ENST00000481194 STX1AQ16623 288 aa22.08■■□□□ 1.13
CCM2-214ENST00000481194 DALRD3Q5D0E6 543 aaKnown RBP22.08■■□□□ 1.13
CCM2-214ENST00000481194 PPP4R3AQ6IN85 833 aa22.08■■□□□ 1.13
CCM2-214ENST00000481194 TXLNBQ8N3L3 684 aa22.08■■□□□ 1.13
CCM2-214ENST00000481194 TOPAZ1Q8N9V7 1692 aa22.08■■□□□ 1.12
CCM2-214ENST00000481194 GOPCQ9HD26 462 aa22.08■■□□□ 1.12
CCM2-214ENST00000481194 RMND1Q9NWS8 449 aa22.08■■□□□ 1.12
CCM2-214ENST00000481194 CAMK4Q16566 473 aa22.08■■□□□ 1.12
CCM2-214ENST00000481194 PPFIBP1Q86W92 1011 aa22.08■■□□□ 1.12
CCM2-214ENST00000481194 ZNHIT6Q9NWK9 470 aaKnown RBP22.08■■□□□ 1.12
CCM2-214ENST00000481194 OFD1O75665 1012 aa22.07■■□□□ 1.12
CCM2-214ENST00000481194 SYT1P21579 422 aa22.07■■□□□ 1.12
CCM2-214ENST00000481194 CCDC70Q6NSX1 233 aa22.07■■□□□ 1.12
CCM2-214ENST00000481194 ZSCAN10Q96SZ4 725 aaPredicted RBP22.07■■□□□ 1.12
CCM2-214ENST00000481194 SPDYE3A6NKU9 549 aa22.07■■□□□ 1.12
CCM2-214ENST00000481194 CRAMP1Q96RY5 1269 aa22.07■■□□□ 1.12
CCM2-214ENST00000481194 SEC62Q99442 399 aaKnown RBP22.07■■□□□ 1.12
CCM2-214ENST00000481194 PPP1R12BO60237 982 aaPredicted RBP22.07■■□□□ 1.12
CCM2-214ENST00000481194 DDAH1O94760 285 aa22.07■■□□□ 1.12
CCM2-214ENST00000481194 RASGRF1Q13972 1273 aa22.07■■□□□ 1.12
CCM2-214ENST00000481194 TFAP4Q01664 338 aa22.06■■□□□ 1.12
CCM2-214ENST00000481194 RILPL1Q5EBL4 403 aa22.06■■□□□ 1.12
CCM2-214ENST00000481194 WWC3Q9ULE0 1092 aa22.06■■□□□ 1.12
CCM2-214ENST00000481194 SPTLC2O15270 562 aa22.06■■□□□ 1.12
CCM2-214ENST00000481194 GTF3C6Q969F1 213 aa22.06■■□□□ 1.12
CCM2-214ENST00000481194 CNPY2Q9Y2B0 182 aa22.06■■□□□ 1.12
CCM2-214ENST00000481194 M0R2C6 588 aa22.06■■□□□ 1.12
CCM2-214ENST00000481194 STXBP4Q6ZWJ1 553 aa22.05■■□□□ 1.12
CCM2-214ENST00000481194 SP8Q8IXZ3 490 aa22.05■■□□□ 1.12
CCM2-214ENST00000481194 TMOD4Q9NZQ9 345 aa22.05■■□□□ 1.12
CCM2-214ENST00000481194 MYO3BQ8WXR4 1341 aa22.05■■□□□ 1.12
CCM2-214ENST00000481194 SYKP43405 635 aa22.05■■□□□ 1.12
CCM2-214ENST00000481194 DCAF15Q66K64 600 aa22.05■■□□□ 1.12
CCM2-214ENST00000481194 PFKFB2O60825 505 aa22.04■■□□□ 1.12
CCM2-214ENST00000481194 USP48Q86UV5 1035 aa22.04■■□□□ 1.12
CCM2-214ENST00000481194 INTS5Q6P9B9 1019 aaKnown RBP22.04■■□□□ 1.12
CCM2-214ENST00000481194 PIM2Q9P1W9 311 aa22.04■■□□□ 1.12
CCM2-214ENST00000481194 NTSR2O95665 410 aa22.04■■□□□ 1.12
CCM2-214ENST00000481194 CCDC17Q96LX7 622 aa22.04■■□□□ 1.12
CCM2-214ENST00000481194 PRDM1O75626 825 aa22.04■■□□□ 1.12
CCM2-214ENST00000481194 LUC7LQ9NQ29 371 aaKnown RBP22.04■■□□□ 1.12
CCM2-214ENST00000481194 ZMYM6O95789 1325 aa22.03■■□□□ 1.12
CCM2-214ENST00000481194 DNM1Q05193 864 aaKnown RBP22.03■■□□□ 1.12
CCM2-214ENST00000481194 GDPD2Q9HCC8 539 aa22.03■■□□□ 1.12
CCM2-214ENST00000481194 PNMA2Q9UL42 364 aa22.03■■□□□ 1.12
CCM2-214ENST00000481194 ARID4AP29374 1257 aaPredicted RBP22.03■■□□□ 1.12
CCM2-214ENST00000481194 MCAMP43121 646 aa22.03■■□□□ 1.12
CCM2-214ENST00000481194 WDR78Q5VTH9 848 aa22.03■■□□□ 1.12
CCM2-214ENST00000481194 DPY19L2Q6NUT2 758 aa22.03■■□□□ 1.12
CCM2-214ENST00000481194 GIMAP6Q6P9H5 292 aa22.03■■□□□ 1.12
CCM2-214ENST00000481194 NOC3LQ8WTT2 800 aaKnown RBP22.03■■□□□ 1.12
CCM2-214ENST00000481194 ZNF512BQ96KM6 892 aaPredicted RBP22.03■■□□□ 1.12
CCM2-214ENST00000481194 RIPOR2Q9Y4F9 1068 aa22.03■■□□□ 1.12
CCM2-214ENST00000481194 CAMTA1Q9Y6Y1 1673 aa22.03■■□□□ 1.12
CCM2-214ENST00000481194 MCTP2Q6DN12 878 aa22.03■■□□□ 1.12
CCM2-214ENST00000481194 ANTXR1Q9H6X2 564 aa22.03■■□□□ 1.12
CCM2-214ENST00000481194 AS3MTQ9HBK9 375 aa22.03■■□□□ 1.12
CCM2-214ENST00000481194 USP17L3A6NCW0 530 aa22.02■■□□□ 1.12
CCM2-214ENST00000481194 USP17L4A6NCW7 530 aa22.02■■□□□ 1.12
CCM2-214ENST00000481194 RXRAP19793 462 aa22.02■■□□□ 1.12
CCM2-214ENST00000481194 USP17L1Q7RTZ2 530 aa22.02■■□□□ 1.12
CCM2-214ENST00000481194 PIH1D3Q9NQM4 214 aaKnown RBP22.02■■□□□ 1.12
CCM2-214ENST00000481194 ZNF654Q8IZM8 581 aa22.02■■□□□ 1.12
CCM2-214ENST00000481194 SDR42E1Q8WUS8 393 aa22.02■■□□□ 1.12
CCM2-214ENST00000481194 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.02■■□□□ 1.12
CCM2-214ENST00000481194 KIAA0825Q8IV33 1275 aa22.02■■□□□ 1.12
CCM2-214ENST00000481194 PPFIA3O75145 1194 aa22.01■■□□□ 1.11
CCM2-214ENST00000481194 UVSSAQ2YD98 709 aa22.01■■□□□ 1.11
CCM2-214ENST00000481194 CELF1Q92879 486 aaKnown RBP22.01■■□□□ 1.11
CCM2-214ENST00000481194 DHX36Q9H2U1 1008 aaKnown RBP22.01■■□□□ 1.11
CCM2-214ENST00000481194 STK24Q9Y6E0 443 aa22.01■■□□□ 1.11
CCM2-214ENST00000481194 ATG9AQ7Z3C6 839 aa22.01■■□□□ 1.11
CCM2-214ENST00000481194 TANGO6Q9C0B7 1094 aa22.01■■□□□ 1.11
CCM2-214ENST00000481194 EN1Q05925 392 aaPredicted RBP22.01■■□□□ 1.11
CCM2-214ENST00000481194 COL14A1Q05707 1796 aaKnown RBP22.01■■□□□ 1.11
CCM2-214ENST00000481194 ARHGAP27Q6ZUM4 889 aa22■■□□□ 1.11
CCM2-214ENST00000481194 PODNQ7Z5L7 613 aa22■■□□□ 1.11
CCM2-214ENST00000481194 SLC1A4P43007 532 aa22■■□□□ 1.11
CCM2-214ENST00000481194 PDZRN4Q6ZMN7 1036 aaPredicted RBP22■■□□□ 1.11
CCM2-214ENST00000481194 PALD1Q9ULE6 856 aa22■■□□□ 1.11
CCM2-214ENST00000481194 TCP10Q12799 353 aa21.99■■□□□ 1.11
CCM2-214ENST00000481194 ZNF589Q86UQ0 364 aaPredicted RBP21.99■■□□□ 1.11
CCM2-214ENST00000481194 SYNE4Q8N205 404 aa21.99■■□□□ 1.11
CCM2-214ENST00000481194 SLC16A10Q8TF71 515 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms