RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CASQ1P31415 396 aa12.59□□□□□ -0.39
COL27A1-204ENST00000477421 CCDC178Q5BJE1 867 aa12.59□□□□□ -0.39
COL27A1-204ENST00000477421 GPIHBP1Q8IV16 184 aa12.59□□□□□ -0.39
COL27A1-204ENST00000477421 CCDC150Q8NCX0 1101 aa12.59□□□□□ -0.39
COL27A1-204ENST00000477421 LZTFL1Q9NQ48 299 aa12.59□□□□□ -0.39
COL27A1-204ENST00000477421 KIAA1468Q9P260 1216 aa12.59□□□□□ -0.39
COL27A1-204ENST00000477421 ZHX1Q9UKY1 873 aaPredicted RBP12.59□□□□□ -0.39
COL27A1-204ENST00000477421 CYP2D7A0A087X1C5 515 aa12.59□□□□□ -0.39
COL27A1-204ENST00000477421 KIF2AO00139 706 aaPredicted RBP12.59□□□□□ -0.39
COL27A1-204ENST00000477421 LDHBP07195 334 aaKnown RBP12.59□□□□□ -0.39
COL27A1-204ENST00000477421 CCT6AP40227 531 aaKnown RBP12.59□□□□□ -0.39
COL27A1-204ENST00000477421 STAT6P42226 847 aa12.59□□□□□ -0.39
COL27A1-204ENST00000477421 APOA5Q6Q788 366 aa12.59□□□□□ -0.39
COL27A1-204ENST00000477421 ZNF622Q969S3 477 aaKnown RBP eCLIP12.59□□□□□ -0.39
COL27A1-204ENST00000477421 EEF2KMTQ96G04 330 aa12.59□□□□□ -0.39
COL27A1-204ENST00000477421 CEP89Q96ST8 783 aa12.59□□□□□ -0.39
COL27A1-204ENST00000477421 UBA5Q9GZZ9 404 aa12.59□□□□□ -0.39
COL27A1-204ENST00000477421 CCNL1Q9UK58 526 aaPredicted RBP12.59□□□□□ -0.39
COL27A1-204ENST00000477421 KRT2P35908 639 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 FANCCQ00597 558 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 SPTY2D1Q68D10 685 aaPredicted RBP12.58□□□□□ -0.4
COL27A1-204ENST00000477421 ATL3Q6DD88 541 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 TMCO3Q6UWJ1 677 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 ZNF654Q8IZM8 581 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 PGBD1Q96JS3 809 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 TRIM47Q96LD4 638 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 BMP2KQ9NSY1 1161 aaPredicted RBP12.58□□□□□ -0.4
COL27A1-204ENST00000477421 CEMIPQ8WUJ3 1361 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 MROH5Q6ZUA9 1318 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 KIF5CO60282 957 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 ZNF500O60304 480 aaPredicted RBP12.58□□□□□ -0.4
COL27A1-204ENST00000477421 MTIF2P46199 727 aaKnown RBP12.58□□□□□ -0.4
COL27A1-204ENST00000477421 FAM193AP78312 1265 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 CLEC17AQ6ZS10 378 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 TECPR2O15040 1411 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 CARMIL3Q8ND23 1372 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 DEXIO95424 95 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 ZNF76P36508 570 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 NAPAP54920 295 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 FOXO4P98177 505 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 RESTQ13127 1097 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 DPCR1Q3MIW9 517 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 ATG3Q9NT62 314 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 PAXBP1Q9Y5B6 917 aa12.58□□□□□ -0.4
COL27A1-204ENST00000477421 TOM1O60784 492 aa12.57□□□□□ -0.4
COL27A1-204ENST00000477421 RPS8P62241 208 aaKnown RBP12.57□□□□□ -0.4
COL27A1-204ENST00000477421 RILPL1Q5EBL4 403 aa12.57□□□□□ -0.4
COL27A1-204ENST00000477421 KANK3Q6NY19 840 aa12.57□□□□□ -0.4
COL27A1-204ENST00000477421 ATG9AQ7Z3C6 839 aa12.57□□□□□ -0.4
COL27A1-204ENST00000477421 NFE2L3Q9Y4A8 694 aa12.57□□□□□ -0.4
COL27A1-204ENST00000477421 CIAO1O76071 339 aa12.57□□□□□ -0.4
COL27A1-204ENST00000477421 PPARAQ07869 468 aa12.57□□□□□ -0.4
COL27A1-204ENST00000477421 RASGRF1Q13972 1273 aa12.57□□□□□ -0.4
COL27A1-204ENST00000477421 ZSWIM5Q9P217 1185 aa12.57□□□□□ -0.4
COL27A1-204ENST00000477421 SUSD4Q5VX71 490 aa12.57□□□□□ -0.4
COL27A1-204ENST00000477421 GPR108Q9NPR9 543 aa12.57□□□□□ -0.4
COL27A1-204ENST00000477421 DENND2AQ9ULE3 1009 aa12.57□□□□□ -0.4
COL27A1-204ENST00000477421 TNKSO95271 1327 aa12.57□□□□□ -0.4
COL27A1-204ENST00000477421 AK9Q5TCS8 1911 aa12.56□□□□□ -0.4
COL27A1-204ENST00000477421 YEATS4O95619 227 aa12.56□□□□□ -0.4
COL27A1-204ENST00000477421 ADD2P35612 726 aa12.56□□□□□ -0.4
COL27A1-204ENST00000477421 NR5A1Q13285 461 aa12.56□□□□□ -0.4
COL27A1-204ENST00000477421 AGLP35573 1532 aa12.56□□□□□ -0.4
COL27A1-204ENST00000477421 COBLO75128 1261 aa12.56□□□□□ -0.4
COL27A1-204ENST00000477421 DYNLL1P63167 89 aaKnown RBP12.56□□□□□ -0.4
COL27A1-204ENST00000477421 ARID5BQ14865 1188 aa12.56□□□□□ -0.4
COL27A1-204ENST00000477421 LCORLQ8N3X6 602 aa12.56□□□□□ -0.4
COL27A1-204ENST00000477421 SERTAD1Q9UHV2 236 aa12.56□□□□□ -0.4
COL27A1-204ENST00000477421 LETM2Q2VYF4 491 aa12.56□□□□□ -0.4
COL27A1-204ENST00000477421 MAPKAPK5Q8IW41 473 aa12.56□□□□□ -0.4
COL27A1-204ENST00000477421 FANCBQ8NB91 859 aa12.56□□□□□ -0.4
COL27A1-204ENST00000477421 VPS16Q9H269 839 aa12.55□□□□□ -0.4
COL27A1-204ENST00000477421 SALL3Q9BXA9 1300 aa12.55□□□□□ -0.4
COL27A1-204ENST00000477421 GOLGA8FQ08AF8 430 aa12.55□□□□□ -0.4
COL27A1-204ENST00000477421 GOLGA8DPQ0D2H9 430 aa12.55□□□□□ -0.4
COL27A1-204ENST00000477421 USPL1Q5W0Q7 1092 aa12.55□□□□□ -0.4
COL27A1-204ENST00000477421 CACTINQ8WUQ7 758 aaKnown RBP12.55□□□□□ -0.4
COL27A1-204ENST00000477421 BLZF1Q9H2G9 400 aa12.55□□□□□ -0.4
COL27A1-204ENST00000477421 RCOR1Q9UKL0 485 aa12.55□□□□□ -0.4
COL27A1-204ENST00000477421 RIMBP3CA6NJZ7 1639 aa12.55□□□□□ -0.4
COL27A1-204ENST00000477421 RIMBP3BA6NNM3 1639 aa12.55□□□□□ -0.4
COL27A1-204ENST00000477421 RIMBP3Q9UFD9 1639 aa12.55□□□□□ -0.4
COL27A1-204ENST00000477421 TRIM21P19474 475 aaKnown RBP12.55□□□□□ -0.4
COL27A1-204ENST00000477421 TFAP4Q01664 338 aa12.55□□□□□ -0.4
COL27A1-204ENST00000477421 UBE3CQ15386 1083 aa12.55□□□□□ -0.4
COL27A1-204ENST00000477421 NOSTRINQ8IVI9 506 aa12.55□□□□□ -0.4
COL27A1-204ENST00000477421 CNBD1Q8NA66 436 aa12.55□□□□□ -0.4
COL27A1-204ENST00000477421 CCDC102AQ96A19 550 aa12.55□□□□□ -0.4
COL27A1-204ENST00000477421 UFL1O94874 794 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 IL6STP40189 918 aaPredicted RBP12.54□□□□□ -0.4
COL27A1-204ENST00000477421 ASIC1P78348 528 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 TDRD12Q587J7 1177 aaKnown RBP12.54□□□□□ -0.4
COL27A1-204ENST00000477421 AXDND1Q5T1B0 1012 aaPredicted RBP12.54□□□□□ -0.4
COL27A1-204ENST00000477421 RUFY1Q96T51 708 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 NYXQ9GZU5 481 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 ZMYND15Q9H091 742 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 U2AF2P26368 475 aaKnown RBP eCLIP12.54□□□□□ -0.4
COL27A1-204ENST00000477421 TNNI2P48788 182 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 TRAPPC3LQ5T215 181 aa12.54□□□□□ -0.4
COL27A1-204ENST00000477421 CCDC181Q5TID7 509 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms