RNA–Protein interactions for RNA: ENST00000473550.1

DUBR-203, DPPA2 upstream binding RNA, humanhuman

TSL 3 BASIC

Gene DUBR, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-203ENST00000473550 BTDP43251 543 aa11.55□□□□□ -0.56
DUBR-203ENST00000473550 TDO2P48775 406 aa11.55□□□□□ -0.56
DUBR-203ENST00000473550 CXCL9Q07325 125 aa11.55□□□□□ -0.56
DUBR-203ENST00000473550 SBK1Q52WX2 424 aa11.55□□□□□ -0.56
DUBR-203ENST00000473550 ADGRA1Q86SQ6 560 aa11.55□□□□□ -0.56
DUBR-203ENST00000473550 MTMR14Q8NCE2 650 aa11.55□□□□□ -0.56
DUBR-203ENST00000473550 GMLQ99445 158 aa11.55□□□□□ -0.56
DUBR-203ENST00000473550 RNF41Q9H4P4 317 aaPredicted RBP11.55□□□□□ -0.56
DUBR-203ENST00000473550 AATFQ9NY61 560 aaKnown RBP eCLIP11.55□□□□□ -0.56
DUBR-203ENST00000473550 ARPP21Q9UBL0 812 aaPredicted RBP11.55□□□□□ -0.56
DUBR-203ENST00000473550 SNX14Q9Y5W7 946 aa11.55□□□□□ -0.56
DUBR-203ENST00000473550 SCN9AQ15858 1988 aa11.54□□□□□ -0.56
DUBR-203ENST00000473550 PSMD14O00487 310 aa11.54□□□□□ -0.56
DUBR-203ENST00000473550 RAD17O75943 681 aa11.54□□□□□ -0.56
DUBR-203ENST00000473550 USP17L8P0C7I0 530 aa11.54□□□□□ -0.56
DUBR-203ENST00000473550 USP5P45974 858 aa11.54□□□□□ -0.56
DUBR-203ENST00000473550 CRKP46108 304 aa11.54□□□□□ -0.56
DUBR-203ENST00000473550 TRDNQ13061 729 aa11.54□□□□□ -0.56
DUBR-203ENST00000473550 DIXDC1Q155Q3 683 aa11.54□□□□□ -0.56
DUBR-203ENST00000473550 SLFNL1Q499Z3 407 aa11.54□□□□□ -0.56
DUBR-203ENST00000473550 VPS53Q5VIR6 699 aa11.54□□□□□ -0.56
DUBR-203ENST00000473550 KIAA0825Q8IV33 1275 aa11.54□□□□□ -0.56
DUBR-203ENST00000473550 SNX21Q969T3 373 aa11.54□□□□□ -0.56
DUBR-203ENST00000473550 CNNM2Q9H8M5 875 aa11.54□□□□□ -0.56
DUBR-203ENST00000473550 ZNF287Q9HBT7 754 aa11.54□□□□□ -0.56
DUBR-203ENST00000473550 ANAPC4Q9UJX5 808 aa11.54□□□□□ -0.56
DUBR-203ENST00000473550 DAGLAQ9Y4D2 1042 aa11.54□□□□□ -0.56
DUBR-203ENST00000473550 LAMA4Q16363 1823 aa11.53□□□□□ -0.56
DUBR-203ENST00000473550 COL4A5P29400 1685 aa11.53□□□□□ -0.56
DUBR-203ENST00000473550 CYP21A2P08686 494 aa11.53□□□□□ -0.56
DUBR-203ENST00000473550 DYNLL1P63167 89 aaKnown RBP11.53□□□□□ -0.56
DUBR-203ENST00000473550 RASSF7Q02833 373 aa11.53□□□□□ -0.56
DUBR-203ENST00000473550 GRIK5Q16478 980 aa11.53□□□□□ -0.56
DUBR-203ENST00000473550 GPR162Q16538 588 aa11.53□□□□□ -0.56
DUBR-203ENST00000473550 TEX11Q8IYF3 940 aa11.53□□□□□ -0.56
DUBR-203ENST00000473550 GPC2Q8N158 579 aa11.53□□□□□ -0.56
DUBR-203ENST00000473550 KIF2CQ99661 725 aa11.53□□□□□ -0.56
DUBR-203ENST00000473550 ALDH8A1Q9H2A2 487 aaPredicted RBP11.53□□□□□ -0.56
DUBR-203ENST00000473550 KCNQ5Q9NR82 932 aa11.53□□□□□ -0.56
DUBR-203ENST00000473550 TMOD2Q9NZR1 351 aa11.53□□□□□ -0.56
DUBR-203ENST00000473550 DAXXQ9UER7 740 aaPredicted RBP11.53□□□□□ -0.56
DUBR-203ENST00000473550 CYP46A1Q9Y6A2 500 aa11.53□□□□□ -0.56
DUBR-203ENST00000473550 F8W031 263 aaPredicted RBP11.52□□□□□ -0.57
DUBR-203ENST00000473550 FOXP2O15409 715 aa11.52□□□□□ -0.57
DUBR-203ENST00000473550 MYO1BO43795 1136 aa11.52□□□□□ -0.57
DUBR-203ENST00000473550 GTPBP6O43824 516 aaPredicted RBP11.52□□□□□ -0.57
DUBR-203ENST00000473550 RBM5P52756 815 aaKnown RBP eCLIP11.52□□□□□ -0.57
DUBR-203ENST00000473550 RHBDL3P58872 404 aa11.52□□□□□ -0.57
DUBR-203ENST00000473550 ANKRD1Q15327 319 aa11.52□□□□□ -0.57
DUBR-203ENST00000473550 DLGAP5Q15398 846 aa11.52□□□□□ -0.57
DUBR-203ENST00000473550 FKBP1CQ5VVH2 108 aa11.52□□□□□ -0.57
DUBR-203ENST00000473550 BLOC1S2Q6QNY1 142 aa11.52□□□□□ -0.57
DUBR-203ENST00000473550 RALYLQ86SE5 291 aaKnown RBP11.52□□□□□ -0.57
DUBR-203ENST00000473550 NCOA7Q8NI08 942 aa11.52□□□□□ -0.57
DUBR-203ENST00000473550 NEK1Q96PY6 1258 aa11.52□□□□□ -0.57
DUBR-203ENST00000473550 PHF12Q96QT6 1004 aa11.52□□□□□ -0.57
DUBR-203ENST00000473550 MTA3Q9BTC8 594 aa11.52□□□□□ -0.57
DUBR-203ENST00000473550 IDI2Q9BXS1 227 aa11.52□□□□□ -0.57
DUBR-203ENST00000473550 KRT23Q9C075 422 aa11.52□□□□□ -0.57
DUBR-203ENST00000473550 ZSWIM6Q9HCJ5 1215 aa11.52□□□□□ -0.57
DUBR-203ENST00000473550 DCP1AQ9NPI6 582 aaPredicted RBP11.52□□□□□ -0.57
DUBR-203ENST00000473550 USP40Q9NVE5 1235 aa11.52□□□□□ -0.57
DUBR-203ENST00000473550 WDR19Q8NEZ3 1342 aa11.52□□□□□ -0.57
DUBR-203ENST00000473550 TIAM2Q8IVF5 1701 aa11.52□□□□□ -0.57
DUBR-203ENST00000473550 FOCADQ5VW36 1801 aa11.51□□□□□ -0.57
DUBR-203ENST00000473550 SBF1O95248 1867 aa11.51□□□□□ -0.57
DUBR-203ENST00000473550 E7EWF7 191 aa11.51□□□□□ -0.57
DUBR-203ENST00000473550 YBX3P16989 372 aaKnown RBP eCLIP11.51□□□□□ -0.57
DUBR-203ENST00000473550 SCNN1DP51172 638 aa11.51□□□□□ -0.57
DUBR-203ENST00000473550 ZNF280AP59817 542 aaPredicted RBP11.51□□□□□ -0.57
DUBR-203ENST00000473550 PDE4BQ07343 736 aa11.51□□□□□ -0.57
DUBR-203ENST00000473550 CFAP100Q494V2 611 aa11.51□□□□□ -0.57
DUBR-203ENST00000473550 APOBEC3HQ6NTF7 200 aaKnown RBP11.51□□□□□ -0.57
DUBR-203ENST00000473550 RUFY3Q7L099 469 aa11.51□□□□□ -0.57
DUBR-203ENST00000473550 TTC6Q86TZ1 520 aa11.51□□□□□ -0.57
DUBR-203ENST00000473550 HSCBQ8IWL3 235 aa11.51□□□□□ -0.57
DUBR-203ENST00000473550 SH3RF3Q8TEJ3 882 aaPredicted RBP11.51□□□□□ -0.57
DUBR-203ENST00000473550 SDR42E1Q8WUS8 393 aa11.51□□□□□ -0.57
DUBR-203ENST00000473550 STAG1Q8WVM7 1258 aa11.51□□□□□ -0.57
DUBR-203ENST00000473550 CHMP4CQ96CF2 233 aa11.51□□□□□ -0.57
DUBR-203ENST00000473550 JAKMIP1Q96N16 626 aaKnown RBP11.51□□□□□ -0.57
DUBR-203ENST00000473550 DHX36Q9H2U1 1008 aaKnown RBP11.51□□□□□ -0.57
DUBR-203ENST00000473550 EPB41L4AQ9HCS5 686 aaPredicted RBP11.51□□□□□ -0.57
DUBR-203ENST00000473550 MKRN1Q9UHC7 482 aaKnown RBP11.51□□□□□ -0.57
DUBR-203ENST00000473550 PALD1Q9ULE6 856 aa11.51□□□□□ -0.57
DUBR-203ENST00000473550 COL2A1P02458 1487 aaPredicted RBP11.51□□□□□ -0.57
DUBR-203ENST00000473550 LAMB1P07942 1786 aa11.5□□□□□ -0.57
DUBR-203ENST00000473550 H7C1D1 291 aa11.5□□□□□ -0.57
DUBR-203ENST00000473550 PRKAB2O43741 272 aa11.5□□□□□ -0.57
DUBR-203ENST00000473550 ENTPD3O75355 529 aa11.5□□□□□ -0.57
DUBR-203ENST00000473550 CASTP20810 708 aaKnown RBP11.5□□□□□ -0.57
DUBR-203ENST00000473550 NEK4P51957 841 aa11.5□□□□□ -0.57
DUBR-203ENST00000473550 PPARAQ07869 468 aa11.5□□□□□ -0.57
DUBR-203ENST00000473550 AKNAD1Q5T1N1 836 aa11.5□□□□□ -0.57
DUBR-203ENST00000473550 DPY19L2Q6NUT2 758 aa11.5□□□□□ -0.57
DUBR-203ENST00000473550 CTR9Q6PD62 1173 aa11.5□□□□□ -0.57
DUBR-203ENST00000473550 MFSD6Q6ZSS7 791 aa11.5□□□□□ -0.57
DUBR-203ENST00000473550 DHX32Q7L7V1 743 aaKnown RBP11.5□□□□□ -0.57
DUBR-203ENST00000473550 FBXL16Q8N461 479 aa11.5□□□□□ -0.57
DUBR-203ENST00000473550 MXD3Q9BW11 206 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms