RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 PAPPA2Q9BXP8 1791 aa16.87■□□□□ 0.29
SSR4-207ENST00000471724 A0A0D9SFI3 127 aa16.86■□□□□ 0.29
SSR4-207ENST00000471724 M0R2C6 588 aa16.86■□□□□ 0.29
SSR4-207ENST00000471724 CDC45O75419 566 aa16.86■□□□□ 0.29
SSR4-207ENST00000471724 USP5P45974 858 aa16.86■□□□□ 0.29
SSR4-207ENST00000471724 PICALMQ13492 652 aa16.86■□□□□ 0.29
SSR4-207ENST00000471724 MCMDC2Q4G0Z9 681 aa16.86■□□□□ 0.29
SSR4-207ENST00000471724 DEFB129Q9H1M3 183 aa16.86■□□□□ 0.29
SSR4-207ENST00000471724 FLT1P17948 1338 aa16.86■□□□□ 0.29
SSR4-207ENST00000471724 SIPA1L1O43166 1804 aa16.86■□□□□ 0.29
SSR4-207ENST00000471724 CNTNAP1P78357 1384 aa16.86■□□□□ 0.29
SSR4-207ENST00000471724 ATRNL1Q5VV63 1379 aa16.86■□□□□ 0.29
SSR4-207ENST00000471724 ADM5C9JUS6 153 aa16.85■□□□□ 0.29
SSR4-207ENST00000471724 CHMLP26374 656 aa16.85■□□□□ 0.29
SSR4-207ENST00000471724 NFIAQ12857 509 aa16.85■□□□□ 0.29
SSR4-207ENST00000471724 RASA3Q14644 834 aa16.85■□□□□ 0.29
SSR4-207ENST00000471724 CWC27Q6UX04 472 aaKnown RBP16.85■□□□□ 0.29
SSR4-207ENST00000471724 FAM151AQ8WW52 585 aa16.85■□□□□ 0.29
SSR4-207ENST00000471724 HOOK2Q96ED9 719 aa16.85■□□□□ 0.29
SSR4-207ENST00000471724 FAM227BQ96M60 508 aa16.85■□□□□ 0.29
SSR4-207ENST00000471724 GLIS2Q9BZE0 524 aaPredicted RBP16.85■□□□□ 0.29
SSR4-207ENST00000471724 FAM198AQ9UFP1 575 aa16.85■□□□□ 0.29
SSR4-207ENST00000471724 CCDC171Q6TFL3 1326 aa16.85■□□□□ 0.29
SSR4-207ENST00000471724 NF2P35240 595 aa16.84■□□□□ 0.29
SSR4-207ENST00000471724 TGFBRAP1Q8WUH2 860 aa16.84■□□□□ 0.29
SSR4-207ENST00000471724 STRBPQ96SI9 672 aaKnown RBP16.84■□□□□ 0.29
SSR4-207ENST00000471724 OSBPL5Q9H0X9 879 aaPredicted RBP16.84■□□□□ 0.29
SSR4-207ENST00000471724 ATP8A2Q9NTI2 1148 aa16.84■□□□□ 0.29
SSR4-207ENST00000471724 SLC4A4Q9Y6R1 1079 aa16.84■□□□□ 0.29
SSR4-207ENST00000471724 OTOFQ9HC10 1997 aa16.84■□□□□ 0.29
SSR4-207ENST00000471724 TCP10Q12799 353 aa16.83■□□□□ 0.28
SSR4-207ENST00000471724 USP48Q86UV5 1035 aa16.83■□□□□ 0.28
SSR4-207ENST00000471724 MAPKAPK5Q8IW41 473 aa16.83■□□□□ 0.28
SSR4-207ENST00000471724 AMOTL1Q8IY63 956 aa16.83■□□□□ 0.28
SSR4-207ENST00000471724 JMYQ8N9B5 988 aa16.83■□□□□ 0.28
SSR4-207ENST00000471724 CDCA5Q96FF9 252 aa16.83■□□□□ 0.28
SSR4-207ENST00000471724 SEC62Q99442 399 aaKnown RBP16.83■□□□□ 0.28
SSR4-207ENST00000471724 NACAP1Q9BZK3 213 aa16.83■□□□□ 0.28
SSR4-207ENST00000471724 DHX36Q9H2U1 1008 aaKnown RBP16.83■□□□□ 0.28
SSR4-207ENST00000471724 DDX4Q9NQI0 724 aaKnown RBP16.83■□□□□ 0.28
SSR4-207ENST00000471724 TRAF5O00463 557 aa16.82■□□□□ 0.28
SSR4-207ENST00000471724 SUPT20HL1Q3ZLR7 823 aa16.82■□□□□ 0.28
SSR4-207ENST00000471724 GIMAP6Q6P9H5 292 aa16.82■□□□□ 0.28
SSR4-207ENST00000471724 ZSCAN29Q8IWY8 852 aaPredicted RBP16.82■□□□□ 0.28
SSR4-207ENST00000471724 SDR42E1Q8WUS8 393 aa16.82■□□□□ 0.28
SSR4-207ENST00000471724 TMEM39BQ9GZU3 492 aa16.82■□□□□ 0.28
SSR4-207ENST00000471724 ABT1Q9ULW3 272 aaKnown RBP16.82■□□□□ 0.28
SSR4-207ENST00000471724 ATAD5Q96QE3 1844 aa16.82■□□□□ 0.28
SSR4-207ENST00000471724 SSC5DA1L4H1 1573 aa16.81■□□□□ 0.28
SSR4-207ENST00000471724 ZMYM6O95789 1325 aa16.81■□□□□ 0.28
SSR4-207ENST00000471724 HLA-DOAP06340 250 aa16.81■□□□□ 0.28
SSR4-207ENST00000471724 CCDC129Q6ZRS4 1044 aa16.81■□□□□ 0.28
SSR4-207ENST00000471724 CSRNP1Q96S65 589 aa16.81■□□□□ 0.28
SSR4-207ENST00000471724 DCP1AQ9NPI6 582 aaPredicted RBP16.81■□□□□ 0.28
SSR4-207ENST00000471724 ARPP21Q9UBL0 812 aaPredicted RBP16.81■□□□□ 0.28
SSR4-207ENST00000471724 MKRN1Q9UHC7 482 aaKnown RBP16.81■□□□□ 0.28
SSR4-207ENST00000471724 SCAF8Q9UPN6 1271 aaKnown RBP16.81■□□□□ 0.28
SSR4-207ENST00000471724 DOCK1Q14185 1865 aa16.8■□□□□ 0.28
SSR4-207ENST00000471724 RASSF10A6NK89 507 aa16.8■□□□□ 0.28
SSR4-207ENST00000471724 SGSM2O43147 1006 aa16.8■□□□□ 0.28
SSR4-207ENST00000471724 CELF2O95319 508 aaKnown RBP16.8■□□□□ 0.28
SSR4-207ENST00000471724 TDO2P48775 406 aa16.8■□□□□ 0.28
SSR4-207ENST00000471724 DEFB115Q30KQ5 88 aa16.8■□□□□ 0.28
SSR4-207ENST00000471724 DCAF15Q66K64 600 aa16.8■□□□□ 0.28
SSR4-207ENST00000471724 ZNF589Q86UQ0 364 aaPredicted RBP16.8■□□□□ 0.28
SSR4-207ENST00000471724 TEPSINQ96N21 525 aa16.8■□□□□ 0.28
SSR4-207ENST00000471724 MCM9Q9NXL9 1143 aa16.8■□□□□ 0.28
SSR4-207ENST00000471724 TAOK2Q9UL54 1235 aa16.8■□□□□ 0.28
SSR4-207ENST00000471724 GSG1L2A8MUP6 293 aa16.79■□□□□ 0.28
SSR4-207ENST00000471724 PRKAB2O43741 272 aa16.79■□□□□ 0.28
SSR4-207ENST00000471724 APPP05067 770 aa16.79■□□□□ 0.28
SSR4-207ENST00000471724 CST9Q5W186 159 aa16.79■□□□□ 0.28
SSR4-207ENST00000471724 TTC6Q86TZ1 520 aa16.79■□□□□ 0.28
SSR4-207ENST00000471724 ESYT1Q9BSJ8 1104 aa16.79■□□□□ 0.28
SSR4-207ENST00000471724 NAPBQ9H115 298 aa16.79■□□□□ 0.28
SSR4-207ENST00000471724 PATL2C9JE40 543 aaKnown RBP16.78■□□□□ 0.28
SSR4-207ENST00000471724 ECE1P42892 770 aa16.78■□□□□ 0.28
SSR4-207ENST00000471724 FKBP1BP68106 108 aa16.78■□□□□ 0.28
SSR4-207ENST00000471724 FMR1Q06787 632 aaKnown RBP eCLIP16.78■□□□□ 0.28
SSR4-207ENST00000471724 DSCC1Q9BVC3 393 aa16.78■□□□□ 0.28
SSR4-207ENST00000471724 EHD4Q9H223 541 aa16.78■□□□□ 0.28
SSR4-207ENST00000471724 ZNF408Q9H9D4 720 aa16.78■□□□□ 0.28
SSR4-207ENST00000471724 EPB41L4AQ9HCS5 686 aaPredicted RBP16.78■□□□□ 0.28
SSR4-207ENST00000471724 PI4KBQ9UBF8 816 aa16.78■□□□□ 0.28
SSR4-207ENST00000471724 SAP30BPQ9UHR5 308 aaKnown RBP16.78■□□□□ 0.28
SSR4-207ENST00000471724 TLL2Q9Y6L7 1015 aa16.78■□□□□ 0.28
SSR4-207ENST00000471724 ROBO3Q96MS0 1386 aa16.77■□□□□ 0.28
SSR4-207ENST00000471724 DDTLA6NHG4 134 aaPredicted RBP16.77■□□□□ 0.28
SSR4-207ENST00000471724 PPP1R12BO60237 982 aaPredicted RBP16.77■□□□□ 0.28
SSR4-207ENST00000471724 POLR3DP05423 398 aaPredicted RBP16.77■□□□□ 0.28
SSR4-207ENST00000471724 HSPD1P10809 573 aaKnown RBP16.77■□□□□ 0.28
SSR4-207ENST00000471724 NBPF12Q5TAG4 269 aaPredicted RBP16.77■□□□□ 0.28
SSR4-207ENST00000471724 KIAA1211Q6ZU35 1233 aa16.77■□□□□ 0.28
SSR4-207ENST00000471724 SH3BP5LQ7L8J4 393 aa16.77■□□□□ 0.28
SSR4-207ENST00000471724 ZFPM1Q8IX07 1006 aa16.77■□□□□ 0.28
SSR4-207ENST00000471724 IFNL3Q8IZI9 196 aa16.77■□□□□ 0.28
SSR4-207ENST00000471724 HHIPL1Q96JK4 782 aa16.77■□□□□ 0.28
SSR4-207ENST00000471724 TRIM34Q9BYJ4 488 aa16.77■□□□□ 0.28
SSR4-207ENST00000471724 HERC5Q9UII4 1024 aaKnown RBP16.77■□□□□ 0.28
SSR4-207ENST00000471724 PALD1Q9ULE6 856 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms