RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 TIAM2Q8IVF5 1701 aa19.93■□□□□ 0.78
NELFCD-201ENST00000460601 IGSF3O75054 1194 aa19.93■□□□□ 0.78
NELFCD-201ENST00000460601 CRKP46108 304 aa19.93■□□□□ 0.78
NELFCD-201ENST00000460601 AKNAD1Q5T1N1 836 aa19.93■□□□□ 0.78
NELFCD-201ENST00000460601 SLF2Q8IX21 1173 aa19.93■□□□□ 0.78
NELFCD-201ENST00000460601 TEX11Q8IYF3 940 aa19.93■□□□□ 0.78
NELFCD-201ENST00000460601 TEKT1Q969V4 418 aa19.93■□□□□ 0.78
NELFCD-201ENST00000460601 TOMM22Q9NS69 142 aa19.93■□□□□ 0.78
NELFCD-201ENST00000460601 SAP30BPQ9UHR5 308 aaKnown RBP19.93■□□□□ 0.78
NELFCD-201ENST00000460601 PRDM1O75626 825 aa19.92■□□□□ 0.78
NELFCD-201ENST00000460601 FGD1P98174 961 aa19.92■□□□□ 0.78
NELFCD-201ENST00000460601 ST3GAL1Q11201 340 aa19.92■□□□□ 0.78
NELFCD-201ENST00000460601 APOBEC3HQ6NTF7 200 aaKnown RBP19.92■□□□□ 0.78
NELFCD-201ENST00000460601 NECAB1Q8N987 351 aa19.92■□□□□ 0.78
NELFCD-201ENST00000460601 PRC1O43663 620 aa19.91■□□□□ 0.78
NELFCD-201ENST00000460601 KDM4AO75164 1064 aa19.91■□□□□ 0.78
NELFCD-201ENST00000460601 RBM5P52756 815 aaKnown RBP eCLIP19.91■□□□□ 0.785e-7■■■□□ 19.2
NELFCD-201ENST00000460601 TRDNQ13061 729 aa19.91■□□□□ 0.78
NELFCD-201ENST00000460601 STK3Q13188 491 aa19.91■□□□□ 0.78
NELFCD-201ENST00000460601 GIMAP6Q6P9H5 292 aa19.91■□□□□ 0.78
NELFCD-201ENST00000460601 MFSD6Q6ZSS7 791 aa19.91■□□□□ 0.78
NELFCD-201ENST00000460601 STAG1Q8WVM7 1258 aa19.91■□□□□ 0.78
NELFCD-201ENST00000460601 SYT17Q9BSW7 474 aa19.91■□□□□ 0.78
NELFCD-201ENST00000460601 ZNRF3Q9ULT6 936 aa19.91■□□□□ 0.78
NELFCD-201ENST00000460601 DDIT3P35638 169 aa19.91■□□□□ 0.78
NELFCD-201ENST00000460601 FKBP1AP62942 108 aaKnown RBP19.91■□□□□ 0.78
NELFCD-201ENST00000460601 PICALMQ13492 652 aa19.91■□□□□ 0.78
NELFCD-201ENST00000460601 FLT1P17948 1338 aa19.91■□□□□ 0.78
NELFCD-201ENST00000460601 PSME4Q14997 1843 aa19.91■□□□□ 0.78
NELFCD-201ENST00000460601 MCM5P33992 734 aa19.9■□□□□ 0.78
NELFCD-201ENST00000460601 CACNB3P54284 484 aa19.9■□□□□ 0.78
NELFCD-201ENST00000460601 CXCL9Q07325 125 aa19.9■□□□□ 0.78
NELFCD-201ENST00000460601 APOBRQ0VD83 1088 aa19.9■□□□□ 0.78
NELFCD-201ENST00000460601 DDX4Q9NQI0 724 aaKnown RBP19.9■□□□□ 0.78
NELFCD-201ENST00000460601 ZSWIM5Q9P217 1185 aa19.9■□□□□ 0.78
NELFCD-201ENST00000460601 ARFGEF1Q9Y6D6 1849 aa19.9■□□□□ 0.78
NELFCD-201ENST00000460601 VIL1P09327 827 aaKnown RBP19.9■□□□□ 0.78
NELFCD-201ENST00000460601 PLCD1P51178 756 aa19.9■□□□□ 0.78
NELFCD-201ENST00000460601 CUL4AQ13619 759 aa19.9■□□□□ 0.78
NELFCD-201ENST00000460601 CDC42EP5Q6NZY7 148 aa19.9■□□□□ 0.78
NELFCD-201ENST00000460601 RSBN1LQ6PCB5 846 aaPredicted RBP19.9■□□□□ 0.78
NELFCD-201ENST00000460601 HHIPL2Q6UWX4 724 aa19.9■□□□□ 0.78
NELFCD-201ENST00000460601 CCDC83Q8IWF9 413 aa19.9■□□□□ 0.78
NELFCD-201ENST00000460601 ZKSCAN3Q9BRR0 538 aa19.9■□□□□ 0.78
NELFCD-201ENST00000460601 ANAPC4Q9UJX5 808 aa19.9■□□□□ 0.78
NELFCD-201ENST00000460601 NAV1Q8NEY1 1877 aa19.89■□□□□ 0.78
NELFCD-201ENST00000460601 LAMB1P07942 1786 aa19.89■□□□□ 0.77
NELFCD-201ENST00000460601 JDP2Q8WYK2 163 aa19.89■□□□□ 0.77
NELFCD-201ENST00000460601 VPS33BQ9H267 617 aa19.89■□□□□ 0.77
NELFCD-201ENST00000460601 ALDH8A1Q9H2A2 487 aaPredicted RBP19.89■□□□□ 0.77
NELFCD-201ENST00000460601 SENP2Q9HC62 589 aa19.89■□□□□ 0.77
NELFCD-201ENST00000460601 USP40Q9NVE5 1235 aa19.89■□□□□ 0.77
NELFCD-201ENST00000460601 ARPP21Q9UBL0 812 aaPredicted RBP19.89■□□□□ 0.77
NELFCD-201ENST00000460601 WDHD1O75717 1129 aaPredicted RBP19.88■□□□□ 0.77
NELFCD-201ENST00000460601 NFIAQ12857 509 aa19.88■□□□□ 0.77
NELFCD-201ENST00000460601 DYNLL2Q96FJ2 89 aa19.88■□□□□ 0.77
NELFCD-201ENST00000460601 ZDHHC15Q96MV8 337 aa19.88■□□□□ 0.77
NELFCD-201ENST00000460601 AGXT2Q9BYV1 514 aa19.88■□□□□ 0.77
NELFCD-201ENST00000460601 PLCG2P16885 1265 aa19.88■□□□□ 0.77
NELFCD-201ENST00000460601 ANKRD1Q15327 319 aa19.88■□□□□ 0.77
NELFCD-201ENST00000460601 DDX60LQ5H9U9 1706 aaKnown RBP19.87■□□□□ 0.77
NELFCD-201ENST00000460601 PKP1Q13835 747 aa19.87■□□□□ 0.77
NELFCD-201ENST00000460601 C12orf60Q5U649 245 aa19.87■□□□□ 0.77
NELFCD-201ENST00000460601 RAB11FIP4Q86YS3 637 aa19.87■□□□□ 0.77
NELFCD-201ENST00000460601 GMLQ99445 158 aa19.87■□□□□ 0.77
NELFCD-201ENST00000460601 SHTN1A0MZ66 631 aa19.87■□□□□ 0.77
NELFCD-201ENST00000460601 SBK1Q52WX2 424 aa19.87■□□□□ 0.77
NELFCD-201ENST00000460601 SLC44A5Q8NCS7 719 aa19.87■□□□□ 0.77
NELFCD-201ENST00000460601 NAP1L2Q9ULW6 460 aaPredicted RBP19.87■□□□□ 0.77
NELFCD-201ENST00000460601 IL27Q8NEV9 243 aa19.86■□□□□ 0.77
NELFCD-201ENST00000460601 CNNM2Q9H8M5 875 aa19.86■□□□□ 0.77
NELFCD-201ENST00000460601 SERPINA10Q9UK55 444 aa19.86■□□□□ 0.77
NELFCD-201ENST00000460601 BRPF3Q9ULD4 1205 aa19.86■□□□□ 0.77
NELFCD-201ENST00000460601 FOCADQ5VW36 1801 aa19.86■□□□□ 0.77
NELFCD-201ENST00000460601 LTBP3Q9NS15 1303 aa19.86■□□□□ 0.77
NELFCD-201ENST00000460601 CFAP100Q494V2 611 aa19.85■□□□□ 0.77
NELFCD-201ENST00000460601 ARHGAP27Q6ZUM4 889 aa19.85■□□□□ 0.77
NELFCD-201ENST00000460601 CERS3Q8IU89 383 aa19.85■□□□□ 0.77
NELFCD-201ENST00000460601 PRMT6Q96LA8 375 aaPredicted RBP19.85■□□□□ 0.77
NELFCD-201ENST00000460601 KRT23Q9C075 422 aa19.85■□□□□ 0.77
NELFCD-201ENST00000460601 RNF41Q9H4P4 317 aaPredicted RBP19.85■□□□□ 0.77
NELFCD-201ENST00000460601 RANBP6O60518 1105 aaKnown RBP19.85■□□□□ 0.77
NELFCD-201ENST00000460601 POLR3DP05423 398 aaPredicted RBP19.85■□□□□ 0.77
NELFCD-201ENST00000460601 ZFPM1Q8IX07 1006 aa19.85■□□□□ 0.77
NELFCD-201ENST00000460601 TDRD3Q9H7E2 651 aaKnown RBP19.85■□□□□ 0.77
NELFCD-201ENST00000460601 PPFIA3O75145 1194 aa19.84■□□□□ 0.77
NELFCD-201ENST00000460601 SLURP2P0DP57 97 aa19.84■□□□□ 0.77
NELFCD-201ENST00000460601 YBX3P16989 372 aaKnown RBP eCLIP19.84■□□□□ 0.776e-7■□□□□ 8.6
NELFCD-201ENST00000460601 TCP10Q12799 353 aa19.84■□□□□ 0.77
NELFCD-201ENST00000460601 FAM47AQ5JRC9 791 aa19.84■□□□□ 0.77
NELFCD-201ENST00000460601 CIAPIN1Q6FI81 312 aa19.84■□□□□ 0.77
NELFCD-201ENST00000460601 IGDCC4Q8TDY8 1250 aa19.84■□□□□ 0.77
NELFCD-201ENST00000460601 ZSCAN31Q96LW9 406 aaPredicted RBP19.84■□□□□ 0.77
NELFCD-201ENST00000460601 NCOA5Q9HCD5 579 aaKnown RBP19.84■□□□□ 0.77
NELFCD-201ENST00000460601 SH2B1Q9NRF2 756 aaPredicted RBP19.84■□□□□ 0.77
NELFCD-201ENST00000460601 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.84■□□□□ 0.77
NELFCD-201ENST00000460601 CCT2P78371 535 aaKnown RBP19.84■□□□□ 0.77
NELFCD-201ENST00000460601 SCRN1Q12765 414 aa19.84■□□□□ 0.77
NELFCD-201ENST00000460601 MRIQ9BWK5 157 aa19.84■□□□□ 0.77
NELFCD-201ENST00000460601 MYO3BQ8WXR4 1341 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms