RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 TMEM74Q96NL1 305 aa5.47□□□□□ -1.53
VPS8-215ENST00000460158 C7orf69Q9H7B7 122 aa5.47□□□□□ -1.53
VPS8-215ENST00000460158 CYP8B1Q9UNU6 501 aa5.47□□□□□ -1.53
VPS8-215ENST00000460158 PCDHB5Q9Y5E4 795 aa5.47□□□□□ -1.53
VPS8-215ENST00000460158 PF4P02776 101 aa5.46□□□□□ -1.54
VPS8-215ENST00000460158 TAL1P17542 331 aaPredicted RBP5.46□□□□□ -1.54
VPS8-215ENST00000460158 RPS26P62854 115 aaKnown RBP5.46□□□□□ -1.54
VPS8-215ENST00000460158 RACK1P63244 317 aaKnown RBP5.46□□□□□ -1.54
VPS8-215ENST00000460158 PTPN11Q06124 597 aaPredicted RBP5.46□□□□□ -1.54
VPS8-215ENST00000460158 RAD51AP2Q09MP3 1159 aa5.46□□□□□ -1.54
VPS8-215ENST00000460158 PWP1Q13610 501 aa5.46□□□□□ -1.54
VPS8-215ENST00000460158 PDE3AQ14432 1141 aa5.46□□□□□ -1.54
VPS8-215ENST00000460158 LRRC14Q15048 493 aa5.46□□□□□ -1.54
VPS8-215ENST00000460158 USP48Q86UV5 1035 aa5.46□□□□□ -1.54
VPS8-215ENST00000460158 CLEC10AQ8IUN9 316 aa5.46□□□□□ -1.54
VPS8-215ENST00000460158 TRIM42Q8IWZ5 723 aa5.46□□□□□ -1.54
VPS8-215ENST00000460158 WDR89Q96FK6 387 aaPredicted RBP5.46□□□□□ -1.54
VPS8-215ENST00000460158 RHOVQ96L33 236 aa5.46□□□□□ -1.54
VPS8-215ENST00000460158 DBNDD2Q9BQY9 259 aa5.46□□□□□ -1.54
VPS8-215ENST00000460158 RUSC1Q9BVN2 902 aa5.46□□□□□ -1.54
VPS8-215ENST00000460158 DDX41Q9UJV9 622 aaKnown RBP5.46□□□□□ -1.54
VPS8-215ENST00000460158 ZNF862O60290 1169 aa5.45□□□□□ -1.54
VPS8-215ENST00000460158 YBX3P16989 372 aaKnown RBP eCLIP5.45□□□□□ -1.54
VPS8-215ENST00000460158 LIG1P18858 919 aa5.45□□□□□ -1.54
VPS8-215ENST00000460158 ERCC5P28715 1186 aaPredicted RBP5.45□□□□□ -1.54
VPS8-215ENST00000460158 FAM160A1Q05DH4 1040 aa5.45□□□□□ -1.54
VPS8-215ENST00000460158 CAMK2GQ13555 558 aaPredicted RBP5.45□□□□□ -1.54
VPS8-215ENST00000460158 ANKRD34AQ69YU3 496 aa5.45□□□□□ -1.54
VPS8-215ENST00000460158 DTX1Q86Y01 620 aa5.45□□□□□ -1.54
VPS8-215ENST00000460158 GPBAR1Q8TDU6 330 aa5.45□□□□□ -1.54
VPS8-215ENST00000460158 GAL3ST3Q96A11 431 aa5.45□□□□□ -1.54
VPS8-215ENST00000460158 FAM83CQ9BQN1 747 aa5.45□□□□□ -1.54
VPS8-215ENST00000460158 TMPRSS13Q9BYE2 586 aa5.45□□□□□ -1.54
VPS8-215ENST00000460158 CACNA2D2Q9NY47 1150 aa5.45□□□□□ -1.54
VPS8-215ENST00000460158 KRTAP4-8A0A0G2JLE6 195 aa5.44□□□□□ -1.54
VPS8-215ENST00000460158 HMX2A2RU54 273 aa5.44□□□□□ -1.54
VPS8-215ENST00000460158 PRR19A6NJB7 356 aa5.44□□□□□ -1.54
VPS8-215ENST00000460158 TRIM37O94972 964 aa5.44□□□□□ -1.54
VPS8-215ENST00000460158 LMNB1P20700 586 aa5.44□□□□□ -1.54
VPS8-215ENST00000460158 EIF4A3P38919 411 aaKnown RBP5.44□□□□□ -1.54
VPS8-215ENST00000460158 LMNB2Q03252 620 aa5.44□□□□□ -1.54
VPS8-215ENST00000460158 SEPT6Q14141 434 aa5.44□□□□□ -1.54
VPS8-215ENST00000460158 EXOSC6Q5RKV6 272 aaKnown RBP5.44□□□□□ -1.54
VPS8-215ENST00000460158 FBXL19Q6PCT2 694 aa5.44□□□□□ -1.54
VPS8-215ENST00000460158 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.44□□□□□ -1.54
VPS8-215ENST00000460158 FAM20CQ8IXL6 584 aa5.44□□□□□ -1.54
VPS8-215ENST00000460158 JARID2Q92833 1246 aaPredicted RBP5.44□□□□□ -1.54
VPS8-215ENST00000460158 WDR18Q9BV38 432 aa5.44□□□□□ -1.54
VPS8-215ENST00000460158 RNF208Q9H0X6 261 aa5.44□□□□□ -1.54
VPS8-215ENST00000460158 MIR1-1HGQ9H1L0 117 aa5.44□□□□□ -1.54
VPS8-215ENST00000460158 KRT82Q9NSB4 513 aa5.44□□□□□ -1.54
VPS8-215ENST00000460158 ADAMTS1Q9UHI8 967 aa5.44□□□□□ -1.54
VPS8-215ENST00000460158 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.44□□□□□ -1.54
VPS8-215ENST00000460158 HIF3AQ9Y2N7 669 aa5.44□□□□□ -1.54
VPS8-215ENST00000460158 MEGF11A6BM72 1044 aa5.43□□□□□ -1.54
VPS8-215ENST00000460158 AOC2O75106 756 aa5.43□□□□□ -1.54
VPS8-215ENST00000460158 WNT11O96014 354 aa5.43□□□□□ -1.54
VPS8-215ENST00000460158 GARTP22102 1010 aa5.43□□□□□ -1.54
VPS8-215ENST00000460158 NUTM2GQ5VZR2 741 aa5.43□□□□□ -1.54
VPS8-215ENST00000460158 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.43□□□□□ -1.54
VPS8-215ENST00000460158 BNC2Q6ZN30 1099 aaPredicted RBP5.43□□□□□ -1.54
VPS8-215ENST00000460158 ZNF654Q8IZM8 581 aa5.43□□□□□ -1.54
VPS8-215ENST00000460158 GOLM1Q8NBJ4 401 aa5.43□□□□□ -1.54
VPS8-215ENST00000460158 ACSBG1Q96GR2 724 aa5.43□□□□□ -1.54
VPS8-215ENST00000460158 TGIF2Q9GZN2 237 aa5.43□□□□□ -1.54
VPS8-215ENST00000460158 ACBD3Q9H3P7 528 aa5.43□□□□□ -1.54
VPS8-215ENST00000460158 RAD18Q9NS91 495 aa5.43□□□□□ -1.54
VPS8-215ENST00000460158 SART1O43290 800 aaKnown RBP5.42□□□□□ -1.54
VPS8-215ENST00000460158 ADAMTS4O75173 837 aa5.42□□□□□ -1.54
VPS8-215ENST00000460158 CDK8P49336 464 aa5.42□□□□□ -1.54
VPS8-215ENST00000460158 KIF4BQ2VIQ3 1234 aa5.42□□□□□ -1.54
VPS8-215ENST00000460158 AKAP4Q5JQC9 854 aa5.42□□□□□ -1.54
VPS8-215ENST00000460158 SNAP47Q5SQN1 464 aa5.42□□□□□ -1.54
VPS8-215ENST00000460158 HP1BP3Q5SSJ5 553 aaPredicted RBP5.42□□□□□ -1.54
VPS8-215ENST00000460158 SCARA3Q6AZY7 606 aa5.42□□□□□ -1.54
VPS8-215ENST00000460158 BEND4Q6ZU67 534 aa5.42□□□□□ -1.54
VPS8-215ENST00000460158 SMG8Q8ND04 991 aaKnown RBP5.42□□□□□ -1.54
VPS8-215ENST00000460158 ZNF296Q8WUU4 475 aaPredicted RBP5.42□□□□□ -1.54
VPS8-215ENST00000460158 SPON2Q9BUD6 331 aa5.42□□□□□ -1.54
VPS8-215ENST00000460158 KCNQ5Q9NR82 932 aa5.42□□□□□ -1.54
VPS8-215ENST00000460158 PPP1R9AQ9ULJ8 1098 aa5.42□□□□□ -1.54
VPS8-215ENST00000460158 PCDHA4Q9UN74 947 aa5.42□□□□□ -1.54
VPS8-215ENST00000460158 RNF114Q9Y508 228 aa5.42□□□□□ -1.54
VPS8-215ENST00000460158 FAM221AA4D161 298 aa5.41□□□□□ -1.54
VPS8-215ENST00000460158 GREM1O60565 184 aa5.41□□□□□ -1.54
VPS8-215ENST00000460158 F13A1P00488 732 aa5.41□□□□□ -1.54
VPS8-215ENST00000460158 SLFN14P0C7P3 912 aa5.41□□□□□ -1.54
VPS8-215ENST00000460158 BMP3P12645 472 aa5.41□□□□□ -1.54
VPS8-215ENST00000460158 DRD2P14416 443 aa5.41□□□□□ -1.54
VPS8-215ENST00000460158 TNNI2P48788 182 aa5.41□□□□□ -1.54
VPS8-215ENST00000460158 INPP5AQ14642 412 aa5.41□□□□□ -1.54
VPS8-215ENST00000460158 FDX2Q6P4F2 183 aa5.41□□□□□ -1.54
VPS8-215ENST00000460158 CCDC84Q86UT8 332 aaPredicted RBP5.41□□□□□ -1.54
VPS8-215ENST00000460158 C12orf50Q8NA57 414 aaPredicted RBP5.41□□□□□ -1.54
VPS8-215ENST00000460158 FBXO27Q8NI29 283 aa5.41□□□□□ -1.54
VPS8-215ENST00000460158 SHKBP1Q8TBC3 707 aa5.41□□□□□ -1.54
VPS8-215ENST00000460158 GATAD2BQ8WXI9 593 aa5.41□□□□□ -1.54
VPS8-215ENST00000460158 EAF1Q96JC9 268 aaPredicted RBP5.41□□□□□ -1.54
VPS8-215ENST00000460158 CCSER2Q9H7U1 834 aa5.41□□□□□ -1.54
VPS8-215ENST00000460158 SUGCTQ9HAC7 445 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms