RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 IFIT3O14879 490 aaKnown RBP21.33■■□□□ 1
SEMA3B-209ENST00000456560 NRBP1Q9UHY1 535 aa21.33■■□□□ 1
SEMA3B-209ENST00000456560 ZNF652Q9Y2D9 606 aa21.33■■□□□ 1
SEMA3B-209ENST00000456560 STK36Q9NRP7 1315 aa21.32■■□□□ 1
SEMA3B-209ENST00000456560 CMA1P23946 247 aa21.32■■□□□ 1
SEMA3B-209ENST00000456560 IARSP41252 1262 aaKnown RBP21.32■■□□□ 1
SEMA3B-209ENST00000456560 MFSD6Q6ZSS7 791 aa21.32■■□□□ 1
SEMA3B-209ENST00000456560 VPS37DQ86XT2 251 aa21.32■■□□□ 1
SEMA3B-209ENST00000456560 SDF4Q9BRK5 362 aa21.32■■□□□ 1
SEMA3B-209ENST00000456560 NACAP1Q9BZK3 213 aa21.32■■□□□ 1
SEMA3B-209ENST00000456560 SLC4A4Q9Y6R1 1079 aa21.32■■□□□ 1
SEMA3B-209ENST00000456560 ZNF804BA4D1E1 1349 aa21.32■■□□□ 1
SEMA3B-209ENST00000456560 A0A087WWV3 80 aa21.32■■□□□ 1
SEMA3B-209ENST00000456560 DRC7Q8IY82 874 aa21.32■■□□□ 1
SEMA3B-209ENST00000456560 CCDC144CPQ8IYA2 1237 aa21.32■■□□□ 1
SEMA3B-209ENST00000456560 CDC5LQ99459 802 aaKnown RBP21.32■■□□□ 1
SEMA3B-209ENST00000456560 MYL10Q9BUA6 226 aa21.32■■□□□ 1
SEMA3B-209ENST00000456560 KCNQ2O43526 872 aa21.31■■□□□ 1
SEMA3B-209ENST00000456560 FBXO41Q8TF61 875 aa21.31■■□□□ 1
SEMA3B-209ENST00000456560 ERCC4Q92889 916 aaPredicted RBP21.31■■□□□ 1
SEMA3B-209ENST00000456560 MRFAP1L1Q96HT8 127 aa21.31■■□□□ 1
SEMA3B-209ENST00000456560 KIAA1468Q9P260 1216 aa21.31■■□□□ 1
SEMA3B-209ENST00000456560 SLC12A7Q9Y666 1083 aa21.31■■□□□ 1
SEMA3B-209ENST00000456560 ZNF831Q5JPB2 1677 aa21.31■■□□□ 1
SEMA3B-209ENST00000456560 WDHD1O75717 1129 aaPredicted RBP21.31■■□□□ 1
SEMA3B-209ENST00000456560 U2AF2P26368 475 aaKnown RBP eCLIP21.31■■□□□ 11e-14■□□□□ 8.7
SEMA3B-209ENST00000456560 SF3B3Q15393 1217 aaKnown RBP21.31■■□□□ 1
SEMA3B-209ENST00000456560 MTA3Q9BTC8 594 aa21.31■■□□□ 1
SEMA3B-209ENST00000456560 LRP2BPQ9P2M1 347 aa21.31■■□□□ 1
SEMA3B-209ENST00000456560 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.3■■□□□ 1
SEMA3B-209ENST00000456560 CCDC69A6NI79 296 aa21.3■■□□□ 1
SEMA3B-209ENST00000456560 TDO2P48775 406 aa21.3■■□□□ 1
SEMA3B-209ENST00000456560 PTPAQ15257 358 aa21.3■■□□□ 1
SEMA3B-209ENST00000456560 C3orf67Q6ZVT6 689 aa21.3■■□□□ 1
SEMA3B-209ENST00000456560 CEP57L1Q8IYX8 460 aa21.3■■□□□ 1
SEMA3B-209ENST00000456560 CLIP2Q9UDT6 1046 aa21.3■■□□□ 1
SEMA3B-209ENST00000456560 ZNF202O95125 648 aa21.29■■□□□ 1
SEMA3B-209ENST00000456560 FMNL1O95466 1100 aaPredicted RBP21.29■■□□□ 1
SEMA3B-209ENST00000456560 IFNAR1P17181 557 aa21.29■■□□□ 1
SEMA3B-209ENST00000456560 ERFEQ4G0M1 354 aa21.29■■□□□ 1
SEMA3B-209ENST00000456560 MAP3K14Q99558 947 aa21.29■■□□□ 1
SEMA3B-209ENST00000456560 A0A1B0GUL6 1792 aa21.29■■□□□ 1
SEMA3B-209ENST00000456560 EP400Q96L91 3159 aa21.29■■□□□ 1
SEMA3B-209ENST00000456560 PFKFB1P16118 471 aa21.29■■□□□ 1
SEMA3B-209ENST00000456560 SSRP1Q08945 709 aaKnown RBP21.29■■□□□ 1
SEMA3B-209ENST00000456560 MIGA1Q8NAN2 632 aa21.29■■□□□ 1
SEMA3B-209ENST00000456560 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.29■■□□□ 1
SEMA3B-209ENST00000456560 BECN2A8MW95 431 aa21.28■■□□□ 1
SEMA3B-209ENST00000456560 PPP6R2O75170 966 aa21.28■■□□□ 1
SEMA3B-209ENST00000456560 ADGRA1Q86SQ6 560 aa21.28■■□□□ 1
SEMA3B-209ENST00000456560 LINC00116Q8NCU8 138 aa21.28■■□□□ 1
SEMA3B-209ENST00000456560 NAT10Q9H0A0 1025 aaKnown RBP21.28■■□□□ 1
SEMA3B-209ENST00000456560 MROH7-TTC4A0A0A0MT08 1334 aa21.28■■□□□ 1
SEMA3B-209ENST00000456560 CYP7A1P22680 504 aa21.28■■□□□ 1
SEMA3B-209ENST00000456560 LRMPQ12912 555 aa21.28■■□□□ 1
SEMA3B-209ENST00000456560 UBE4AQ14139 1066 aa21.28■■□□□ 1
SEMA3B-209ENST00000456560 CCDC144BQ3MJ40 725 aa21.28■■□□□ 1
SEMA3B-209ENST00000456560 ANKRD18AQ8IVF6 992 aa21.28■■□□□ 1
SEMA3B-209ENST00000456560 SEPT12Q8IYM1 358 aa21.28■■□□□ 1
SEMA3B-209ENST00000456560 TSC1Q92574 1164 aa21.28■■□□□ 1
SEMA3B-209ENST00000456560 CCDC94Q9BW85 323 aaPredicted RBP21.28■■□□□ 1
SEMA3B-209ENST00000456560 FAM237AA0A1B0GTK4 181 aa21.27■■□□□ 1
SEMA3B-209ENST00000456560 TIGD1Q96MW7 591 aa21.27■■□□□ 1
SEMA3B-209ENST00000456560 BPIFA3Q9BQP9 254 aa21.27■■□□□ 1
SEMA3B-209ENST00000456560 SLC26A6Q9BXS9 759 aa21.27■■□□□ 1
SEMA3B-209ENST00000456560 BSDC1Q9NW68 430 aaPredicted RBP21.27■■□□□ 1
SEMA3B-209ENST00000456560 HPSEQ9Y251 543 aa21.27■■□□□ 1
SEMA3B-209ENST00000456560 UBE2Q2LH0YL09 131 aa21.27■□□□□ 0.99
SEMA3B-209ENST00000456560 MARCKSP29966 332 aaPredicted RBP21.27■□□□□ 0.99
SEMA3B-209ENST00000456560 GTF2F1P35269 517 aaKnown RBP eCLIP21.27■□□□□ 0.99
SEMA3B-209ENST00000456560 GYG1P46976 350 aa21.27■□□□□ 0.99
SEMA3B-209ENST00000456560 PPARAQ07869 468 aa21.27■□□□□ 0.99
SEMA3B-209ENST00000456560 TRIM29Q14134 588 aa21.27■□□□□ 0.99
SEMA3B-209ENST00000456560 PTF1AQ7RTS3 328 aa21.27■□□□□ 0.99
SEMA3B-209ENST00000456560 RNF41Q9H4P4 317 aaPredicted RBP21.27■□□□□ 0.99
SEMA3B-209ENST00000456560 GNL3LQ9NVN8 582 aaKnown RBP21.27■□□□□ 0.99
SEMA3B-209ENST00000456560 IQSEC3Q9UPP2 1182 aaPredicted RBP21.27■□□□□ 0.99
SEMA3B-209ENST00000456560 COL1A1P02452 1464 aaPredicted RBP21.26■□□□□ 0.99
SEMA3B-209ENST00000456560 RGL2O15211 777 aa21.26■□□□□ 0.99
SEMA3B-209ENST00000456560 RBM6P78332 1123 aaKnown RBP21.26■□□□□ 0.99
SEMA3B-209ENST00000456560 WTAPQ15007 396 aa21.26■□□□□ 0.99
SEMA3B-209ENST00000456560 RRP12Q5JTH9 1297 aaKnown RBP21.26■□□□□ 0.99
SEMA3B-209ENST00000456560 AOPEPQ8N6M6 819 aa21.26■□□□□ 0.99
SEMA3B-209ENST00000456560 CACTINQ8WUQ7 758 aaKnown RBP21.26■□□□□ 0.99
SEMA3B-209ENST00000456560 WASF1Q92558 559 aa21.26■□□□□ 0.99
SEMA3B-209ENST00000456560 ANAPC4Q9UJX5 808 aa21.26■□□□□ 0.99
SEMA3B-209ENST00000456560 THSD7AQ9UPZ6 1657 aa21.26■□□□□ 0.99
SEMA3B-209ENST00000456560 WTIPA6NIX2 430 aaPredicted RBP21.25■□□□□ 0.99
SEMA3B-209ENST00000456560 SLC3A2P08195 630 aaKnown RBP21.25■□□□□ 0.99
SEMA3B-209ENST00000456560 RCAN1P53805 252 aa21.25■□□□□ 0.99
SEMA3B-209ENST00000456560 SART3Q15020 963 aaKnown RBP21.25■□□□□ 0.99
SEMA3B-209ENST00000456560 SLC10A5Q5PT55 438 aa21.25■□□□□ 0.99
SEMA3B-209ENST00000456560 SMAP1Q8IYB5 467 aaPredicted RBP21.25■□□□□ 0.99
SEMA3B-209ENST00000456560 TMTC2Q8N394 836 aa21.25■□□□□ 0.99
SEMA3B-209ENST00000456560 JMYQ8N9B5 988 aa21.25■□□□□ 0.99
SEMA3B-209ENST00000456560 GNL2Q13823 731 aaKnown RBP21.25■□□□□ 0.99
SEMA3B-209ENST00000456560 SHC4Q6S5L8 630 aa21.25■□□□□ 0.99
SEMA3B-209ENST00000456560 NBPF11Q86T75 865 aa21.25■□□□□ 0.99
SEMA3B-209ENST00000456560 ZKSCAN3Q9BRR0 538 aa21.25■□□□□ 0.99
SEMA3B-209ENST00000456560 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms