RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 C19orf44Q9H6X5 657 aa16.21■□□□□ 0.19
MCF2L-218ENST00000442625 ARGLU1Q9NWB6 273 aaPredicted RBP16.21■□□□□ 0.19
MCF2L-218ENST00000442625 GRIN1Q05586 938 aa16.21■□□□□ 0.19
MCF2L-218ENST00000442625 SLC39A14Q15043 492 aa16.21■□□□□ 0.19
MCF2L-218ENST00000442625 LRRFIP1Q32MZ4 808 aaKnown RBP16.21■□□□□ 0.19
MCF2L-218ENST00000442625 APPBP2Q92624 585 aa16.21■□□□□ 0.19
MCF2L-218ENST00000442625 ALG1Q9BT22 464 aa16.21■□□□□ 0.19
MCF2L-218ENST00000442625 CARD10Q9BWT7 1032 aa16.21■□□□□ 0.19
MCF2L-218ENST00000442625 CC2D1AQ6P1N0 951 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-218ENST00000442625 CYB5R4Q7L1T6 521 aa16.2■□□□□ 0.18
MCF2L-218ENST00000442625 MICU3Q86XE3 530 aa16.2■□□□□ 0.18
MCF2L-218ENST00000442625 FBXL16Q8N461 479 aa16.2■□□□□ 0.18
MCF2L-218ENST00000442625 NWD2Q9ULI1 1742 aa16.2■□□□□ 0.18
MCF2L-218ENST00000442625 IKBKBO14920 756 aa16.2■□□□□ 0.18
MCF2L-218ENST00000442625 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-218ENST00000442625 TBC1D10CQ8IV04 446 aa16.2■□□□□ 0.18
MCF2L-218ENST00000442625 DHX58Q96C10 678 aa16.2■□□□□ 0.18
MCF2L-218ENST00000442625 PARD6BQ9BYG5 372 aa16.2■□□□□ 0.18
MCF2L-218ENST00000442625 CASQ1P31415 396 aa16.19■□□□□ 0.18
MCF2L-218ENST00000442625 FMR1Q06787 632 aaKnown RBP eCLIP16.19■□□□□ 0.18
MCF2L-218ENST00000442625 KRT40Q6A162 431 aa16.19■□□□□ 0.18
MCF2L-218ENST00000442625 KRBA2Q6ZNG9 492 aa16.19■□□□□ 0.18
MCF2L-218ENST00000442625 TUBE1Q9UJT0 475 aa16.19■□□□□ 0.18
MCF2L-218ENST00000442625 GLI3P10071 1580 aa16.19■□□□□ 0.18
MCF2L-218ENST00000442625 EFCAB8A8MWE9 144 aa16.19■□□□□ 0.18
MCF2L-218ENST00000442625 PPP2R3AQ06190 1150 aa16.19■□□□□ 0.18
MCF2L-218ENST00000442625 SMC1AQ14683 1233 aaKnown RBP16.19■□□□□ 0.18
MCF2L-218ENST00000442625 CHMP4CQ96CF2 233 aa16.19■□□□□ 0.18
MCF2L-218ENST00000442625 BAG1Q99933 345 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-218ENST00000442625 PRR29P0C7W0 189 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 MCAMP43121 646 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 KCNJ6P48051 423 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 METAP2P50579 478 aaKnown RBP eCLIP16.18■□□□□ 0.18
MCF2L-218ENST00000442625 RAD51AP2Q09MP3 1159 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 EGFL6Q8IUX8 553 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 CNNM3Q8NE01 707 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 B4E1Z4 1266 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 ZFYP08048 801 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-218ENST00000442625 ATF3P18847 181 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 ATP2B1P20020 1258 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 SLC20A2Q08357 652 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 PTPAQ15257 358 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 SLC9C2Q5TAH2 1124 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 CCDC82Q8N4S0 544 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 GPATCH11Q8N954 259 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.18■□□□□ 0.18
MCF2L-218ENST00000442625 CPLX3Q8WVH0 158 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 LZTFL1Q9NQ48 299 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 AKAP2Q9Y2D5 859 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 IDH1O75874 414 aaKnown RBP16.18■□□□□ 0.18
MCF2L-218ENST00000442625 OLFM4Q6UX06 510 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 MRPL44Q9H9J2 332 aaKnown RBP16.18■□□□□ 0.18
MCF2L-218ENST00000442625 PUF60Q9UHX1 559 aaKnown RBP16.18■□□□□ 0.18
MCF2L-218ENST00000442625 HPSEQ9Y251 543 aa16.18■□□□□ 0.18
MCF2L-218ENST00000442625 TRDNQ13061 729 aa16.17■□□□□ 0.18
MCF2L-218ENST00000442625 METTL24Q5JXM2 366 aa16.17■□□□□ 0.18
MCF2L-218ENST00000442625 TC2NQ8N9U0 490 aa16.17■□□□□ 0.18
MCF2L-218ENST00000442625 ZCRB1Q8TBF4 217 aaKnown RBP16.17■□□□□ 0.18
MCF2L-218ENST00000442625 ATG3Q9NT62 314 aa16.17■□□□□ 0.18
MCF2L-218ENST00000442625 ANGEL1Q9UNK9 670 aaKnown RBP16.17■□□□□ 0.18
MCF2L-218ENST00000442625 TJP1Q07157 1748 aa16.17■□□□□ 0.18
MCF2L-218ENST00000442625 KIF1AQ12756 1690 aa16.17■□□□□ 0.18
MCF2L-218ENST00000442625 H3BQF6 201 aa16.17■□□□□ 0.18
MCF2L-218ENST00000442625 COBLO75128 1261 aa16.17■□□□□ 0.18
MCF2L-218ENST00000442625 MAP3K9P80192 1104 aa16.17■□□□□ 0.18
MCF2L-218ENST00000442625 IFIT5Q13325 482 aaKnown RBP16.17■□□□□ 0.18
MCF2L-218ENST00000442625 WWC2Q6AWC2 1192 aa16.17■□□□□ 0.18
MCF2L-218ENST00000442625 TOM1L2Q6ZVM7 507 aa16.17■□□□□ 0.18
MCF2L-218ENST00000442625 TRIM34Q9BYJ4 488 aa16.17■□□□□ 0.18
MCF2L-218ENST00000442625 SEC31BQ9NQW1 1179 aa16.17■□□□□ 0.18
MCF2L-218ENST00000442625 SAMSN1Q9NSI8 373 aaKnown RBP16.17■□□□□ 0.18
MCF2L-218ENST00000442625 LCMT1Q9UIC8 334 aa16.17■□□□□ 0.18
MCF2L-218ENST00000442625 KCNH3Q9ULD8 1083 aa16.17■□□□□ 0.18
MCF2L-218ENST00000442625 SOWAHDA6NJG2 315 aa16.16■□□□□ 0.18
MCF2L-218ENST00000442625 TULP2O00295 520 aa16.16■□□□□ 0.18
MCF2L-218ENST00000442625 CBFA2T2O43439 604 aa16.16■□□□□ 0.18
MCF2L-218ENST00000442625 GPTP24298 496 aa16.16■□□□□ 0.18
MCF2L-218ENST00000442625 MAP3K14Q99558 947 aa16.16■□□□□ 0.18
MCF2L-218ENST00000442625 SUGCTQ9HAC7 445 aa16.16■□□□□ 0.18
MCF2L-218ENST00000442625 NFE2L3Q9Y4A8 694 aa16.16■□□□□ 0.18
MCF2L-218ENST00000442625 ZMYM6O95789 1325 aa16.16■□□□□ 0.18
MCF2L-218ENST00000442625 ARHGAP6O43182 974 aa16.16■□□□□ 0.18
MCF2L-218ENST00000442625 ZSCAN12O43309 604 aa16.16■□□□□ 0.18
MCF2L-218ENST00000442625 NFXL1Q6ZNB6 911 aa16.16■□□□□ 0.18
MCF2L-218ENST00000442625 CMTR1Q8N1G2 835 aaKnown RBP16.16■□□□□ 0.18
MCF2L-218ENST00000442625 CCDC12Q8WUD4 166 aaPredicted RBP16.16■□□□□ 0.18
MCF2L-218ENST00000442625 KIFC2Q96AC6 838 aa16.16■□□□□ 0.18
MCF2L-218ENST00000442625 MRFAP1Q9Y605 127 aa16.16■□□□□ 0.18
MCF2L-218ENST00000442625 TCIRG1Q13488 830 aa16.15■□□□□ 0.18
MCF2L-218ENST00000442625 APOA5Q6Q788 366 aa16.15■□□□□ 0.18
MCF2L-218ENST00000442625 MED15Q96RN5 788 aa16.15■□□□□ 0.18
MCF2L-218ENST00000442625 ISCA1Q9BUE6 129 aa16.15■□□□□ 0.18
MCF2L-218ENST00000442625 PIH1D3Q9NQM4 214 aaKnown RBP16.15■□□□□ 0.18
MCF2L-218ENST00000442625 CPDO75976 1380 aa16.15■□□□□ 0.18
MCF2L-218ENST00000442625 ALS2Q96Q42 1657 aa16.15■□□□□ 0.18
MCF2L-218ENST00000442625 TRIM66O15016 1216 aa16.15■□□□□ 0.18
MCF2L-218ENST00000442625 CCP110O43303 1012 aa16.15■□□□□ 0.18
MCF2L-218ENST00000442625 CASP1P29466 404 aa16.15■□□□□ 0.18
MCF2L-218ENST00000442625 RESP18Q5W5W9 173 aa16.15■□□□□ 0.18
MCF2L-218ENST00000442625 FUT8Q9BYC5 575 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 383.5 ms