RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 IPO11Q9UI26 975 aaKnown RBP5.09□□□□□ -1.59
LRRK2-204ENST00000430804 ARHGEF35A5YM69 484 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 MANSC4A6NHS7 340 aaPredicted RBP5.09□□□□□ -1.59
LRRK2-204ENST00000430804 STAG3L1P0CL83 205 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 HARSP12081 509 aaKnown RBP5.09□□□□□ -1.59
LRRK2-204ENST00000430804 HCLS1P14317 486 aaPredicted RBP5.09□□□□□ -1.59
LRRK2-204ENST00000430804 HOXC9P31274 260 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 ARL4DP49703 201 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 GTF2A2P52657 109 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 TGFB2P61812 414 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 DGKZQ13574 1117 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 SPA17Q15506 151 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 PTPROQ16827 1216 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 MCMDC2Q4G0Z9 681 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 DNAJC10Q8IXB1 793 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 HELBQ8NG08 1087 aaPredicted RBP5.09□□□□□ -1.59
LRRK2-204ENST00000430804 RBM46Q8TBY0 533 aaKnown RBP5.09□□□□□ -1.59
LRRK2-204ENST00000430804 MKRN1Q9UHC7 482 aaKnown RBP5.09□□□□□ -1.59
LRRK2-204ENST00000430804 RABGAP1Q9Y3P9 1069 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 SCAF11Q99590 1463 aaKnown RBP5.09□□□□□ -1.59
LRRK2-204ENST00000430804 FAM135BQ49AJ0 1406 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 RPS6KA4O75676 772 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 ZMYND10O75800 440 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 RARBP10826 455 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 PRPHP41219 470 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 NEK4P51957 841 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 UBE4AQ14139 1066 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 NFKBIBQ15653 356 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 RPUSD2Q8IZ73 545 aaKnown RBP5.09□□□□□ -1.59
LRRK2-204ENST00000430804 KATNAL1Q9BW62 490 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 MAP10Q9P2G4 905 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 PARD3Q8TEW0 1356 aa5.09□□□□□ -1.59
LRRK2-204ENST00000430804 CCDC171Q6TFL3 1326 aa5.09□□□□□ -1.6
LRRK2-204ENST00000430804 DUOX2Q9NRD8 1548 aa5.09□□□□□ -1.6
LRRK2-204ENST00000430804 SEMA3EO15041 775 aa5.09□□□□□ -1.6
LRRK2-204ENST00000430804 RPS12P25398 132 aaKnown RBP5.09□□□□□ -1.6
LRRK2-204ENST00000430804 NR1H3Q13133 447 aa5.09□□□□□ -1.6
LRRK2-204ENST00000430804 KRT33BQ14525 404 aa5.09□□□□□ -1.6
LRRK2-204ENST00000430804 TBC1D10BQ4KMP7 808 aaPredicted RBP5.09□□□□□ -1.6
LRRK2-204ENST00000430804 LINS1Q8NG48 757 aa5.09□□□□□ -1.6
LRRK2-204ENST00000430804 RMND1Q9NWS8 449 aa5.09□□□□□ -1.6
LRRK2-204ENST00000430804 SWAP70Q9UH65 585 aa5.09□□□□□ -1.6
LRRK2-204ENST00000430804 MRVI1Q9Y6F6 885 aa5.09□□□□□ -1.6
LRRK2-204ENST00000430804 POLR3AO14802 1390 aaPredicted RBP5.09□□□□□ -1.6
LRRK2-204ENST00000430804 MAP3K5Q99683 1374 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 PI4KAP2A4QPH2 592 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 RPL13P26373 211 aaKnown RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 ABCD1P33897 745 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 STK3Q13188 491 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 ABCB5Q2M3G0 1257 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 FOXD4L6Q3SYB3 417 aaPredicted RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 FOXD4L3Q6VB84 417 aaPredicted RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 PI4KAP1Q8N8J0 262 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 GIMAP8Q8ND71 665 aaPredicted RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 C8orf76Q96K31 380 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 CSRNP1Q96S65 589 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 DDX23Q9BUQ8 820 aaKnown RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 BABAM1Q9NWV8 329 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 CCPG1Q9ULG6 757 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 IKBKGQ9Y6K9 419 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 PHLPP2Q6ZVD8 1323 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 AATKQ6ZMQ8 1374 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 ZNF233A6NK53 670 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 ASB14A6NK59 587 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 SERPINC1P01008 464 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 ARID4AP29374 1257 aaPredicted RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 MCM5P33992 734 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 SLC15A2Q16348 729 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 IFI16Q16666 785 aaKnown RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 LIN9Q5TKA1 542 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 KANK3Q6NY19 840 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 RABGGTAQ92696 567 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 GLT1D1Q96MS3 346 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 PPP1R9BQ96SB3 815 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 NUDT12Q9BQG2 462 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 RRAGCQ9HB90 399 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 EXOC1Q9NV70 894 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 NOB1Q9ULX3 412 aaKnown RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 GOLGA6CA6NDK9 693 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 GOLGA6BA6NDN3 693 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 GRM8O00222 908 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 GOLGA6DP0CG33 693 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 ITGA6P23229 1130 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 INHBEP58166 350 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 NOGQ13253 232 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 PPP2R5AQ15172 486 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 THEM5Q8N1Q8 247 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 TMEM57Q8N5G2 664 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 CCT6BQ92526 530 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 COA1Q9GZY4 146 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 GPCPD1Q9NPB8 672 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 GOLGA6AQ9NYA3 693 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 PKD2L1Q9P0L9 805 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 FAN1Q9Y2M0 1017 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 TESPA1A2RU30 521 aaPredicted RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 SPDYE16A6NNV3 312 aaPredicted RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 WDR64B1ANS9 1081 aa5.08□□□□□ -1.6
LRRK2-204ENST00000430804 PATL2C9JE40 543 aaKnown RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 GCOM1H8Y6P7 765 aaPredicted RBP5.08□□□□□ -1.6
LRRK2-204ENST00000430804 FKTNO75072 461 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms