RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 DCAF8L2P0C7V8 631 aa8.18□□□□□ -1.1
LRRK2-204ENST00000430804 FAM9AQ8IZU1 332 aaPredicted RBP7.86□□□□□ -1.15
LRRK2-204ENST00000430804 NISCHQ9Y2I1 1504 aa7.44□□□□□ -1.22
LRRK2-204ENST00000430804 APLP2Q06481 763 aa7.27□□□□□ -1.24
LRRK2-204ENST00000430804 MYT1LQ9UL68 1186 aa7.2□□□□□ -1.26
LRRK2-204ENST00000430804 SUPT5HO00267 1087 aaKnown RBP7.05□□□□□ -1.28
LRRK2-204ENST00000430804 ATP1B4Q9UN42 357 aaPredicted RBP7.05□□□□□ -1.28
LRRK2-204ENST00000430804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.99□□□□□ -1.29
LRRK2-204ENST00000430804 HNRNPUL2Q1KMD3 747 aaKnown RBP6.99□□□□□ -1.29
LRRK2-204ENST00000430804 ESF1Q9H501 851 aaKnown RBP6.92□□□□□ -1.3
LRRK2-204ENST00000430804 TTBK1Q5TCY1 1321 aaPredicted RBP6.9□□□□□ -1.3
LRRK2-204ENST00000430804 SHROOM4Q9ULL8 1493 aa6.89□□□□□ -1.31
LRRK2-204ENST00000430804 NPM1P06748 294 aaKnown RBP eCLIP6.89□□□□□ -1.31
LRRK2-204ENST00000430804 EHMT2Q96KQ7 1210 aa6.87□□□□□ -1.31
LRRK2-204ENST00000430804 RANGAP1P46060 587 aaPredicted RBP6.85□□□□□ -1.31
LRRK2-204ENST00000430804 CHIC1Q5VXU3 224 aa6.84□□□□□ -1.31
LRRK2-204ENST00000430804 FBLN2P98095 1184 aa6.82□□□□□ -1.32
LRRK2-204ENST00000430804 AEBP2Q6ZN18 517 aaPredicted RBP6.8□□□□□ -1.32
LRRK2-204ENST00000430804 PELP1Q8IZL8 1130 aaKnown RBP6.8□□□□□ -1.32
LRRK2-204ENST00000430804 BCANQ96GW7 911 aa6.79□□□□□ -1.32
LRRK2-204ENST00000430804 UBTFP17480 764 aaKnown RBP6.76□□□□□ -1.33
LRRK2-204ENST00000430804 ABCC9O60706 1549 aa6.74□□□□□ -1.33
LRRK2-204ENST00000430804 SLC4A1APQ9BWU0 796 aaKnown RBP6.71□□□□□ -1.34
LRRK2-204ENST00000430804 PABPN1Q86U42 306 aaKnown RBP eCLIP6.7□□□□□ -1.34
LRRK2-204ENST00000430804 TRHP20396 242 aaPredicted RBP6.69□□□□□ -1.34
LRRK2-204ENST00000430804 TRIM41Q8WV44 630 aa6.68□□□□□ -1.34
LRRK2-204ENST00000430804 PLPPR3Q6T4P5 718 aa6.65□□□□□ -1.34
LRRK2-204ENST00000430804 STAG3Q9UJ98 1225 aa6.65□□□□□ -1.34
LRRK2-204ENST00000430804 DCAF8L1A6NGE4 600 aa6.6□□□□□ -1.35
LRRK2-204ENST00000430804 FOXD1Q16676 465 aa6.58□□□□□ -1.36
LRRK2-204ENST00000430804 CDK11AQ9UQ88 783 aaPredicted RBP6.57□□□□□ -1.36
LRRK2-204ENST00000430804 NEFMP07197 916 aa6.56□□□□□ -1.36
LRRK2-204ENST00000430804 ARID4BQ4LE39 1312 aaPredicted RBP6.55□□□□□ -1.36
LRRK2-204ENST00000430804 NPM2Q86SE8 214 aaKnown RBP6.55□□□□□ -1.36
LRRK2-204ENST00000430804 CCER1Q8TC90 406 aaPredicted RBP6.55□□□□□ -1.36
LRRK2-204ENST00000430804 SLC24A1O60721 1099 aa6.54□□□□□ -1.36
LRRK2-204ENST00000430804 HAP1P54257 671 aaPredicted RBP6.54□□□□□ -1.36
LRRK2-204ENST00000430804 CHMP7Q8WUX9 453 aaPredicted RBP6.54□□□□□ -1.36
LRRK2-204ENST00000430804 C14orf37Q86TY3 774 aa6.53□□□□□ -1.36
LRRK2-204ENST00000430804 SCAF1Q9H7N4 1312 aaKnown RBP6.52□□□□□ -1.37
LRRK2-204ENST00000430804 POLR3GLQ9BT43 218 aa6.52□□□□□ -1.37
LRRK2-204ENST00000430804 A0A0G2JS52 829 aa6.5□□□□□ -1.37
LRRK2-204ENST00000430804 ZBTB47Q9UFB7 747 aaPredicted RBP6.48□□□□□ -1.37
LRRK2-204ENST00000430804 ERCC6Q03468 1493 aa6.47□□□□□ -1.37
LRRK2-204ENST00000430804 MYT1Q01538 1121 aa6.45□□□□□ -1.38
LRRK2-204ENST00000430804 TRIM52Q96A61 297 aa6.43□□□□□ -1.38
LRRK2-204ENST00000430804 PPP1R15AO75807 674 aaPredicted RBP6.43□□□□□ -1.38
LRRK2-204ENST00000430804 CHGAP10645 457 aaKnown RBP6.43□□□□□ -1.38
LRRK2-204ENST00000430804 ITGAEP38570 1179 aa6.43□□□□□ -1.38
LRRK2-204ENST00000430804 NEFLP07196 543 aa6.39□□□□□ -1.39
LRRK2-204ENST00000430804 ZNF777Q9ULD5 760 aaPredicted RBP6.39□□□□□ -1.39
LRRK2-204ENST00000430804 HDGFP51858 240 aaKnown RBP6.37□□□□□ -1.39
LRRK2-204ENST00000430804 ERICH6Q7L0X2 663 aa6.37□□□□□ -1.39
LRRK2-204ENST00000430804 DAXXQ9UER7 740 aaPredicted RBP6.36□□□□□ -1.39
LRRK2-204ENST00000430804 FAM50AQ14320 339 aaKnown RBP6.36□□□□□ -1.39
LRRK2-204ENST00000430804 NPHP1O15259 732 aa6.36□□□□□ -1.39
LRRK2-204ENST00000430804 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.35□□□□□ -1.39
LRRK2-204ENST00000430804 PHF23Q9BUL5 403 aaPredicted RBP6.35□□□□□ -1.39
LRRK2-204ENST00000430804 PCGF6Q9BYE7 350 aa6.34□□□□□ -1.39
LRRK2-204ENST00000430804 ARID3CA6NKF2 412 aa6.31□□□□□ -1.4
LRRK2-204ENST00000430804 TMX4Q9H1E5 349 aaPredicted RBP6.3□□□□□ -1.4
LRRK2-204ENST00000430804 ZBTB7CA1YPR0 619 aa6.3□□□□□ -1.4
LRRK2-204ENST00000430804 TSPY4P0CV99 314 aa6.3□□□□□ -1.4
LRRK2-204ENST00000430804 TSPY10P0CW01 314 aa6.3□□□□□ -1.4
LRRK2-204ENST00000430804 EIF4G2P78344 907 aaKnown RBP eCLIP6.28□□□□□ -1.4
LRRK2-204ENST00000430804 ZNF326Q5BKZ1 582 aaKnown RBP6.28□□□□□ -1.4
LRRK2-204ENST00000430804 KCNH8Q96L42 1107 aa6.28□□□□□ -1.4
LRRK2-204ENST00000430804 MEX3CQ5U5Q3 659 aaKnown RBP6.28□□□□□ -1.4
LRRK2-204ENST00000430804 CLSPNQ9HAW4 1339 aa6.27□□□□□ -1.41
LRRK2-204ENST00000430804 ZEB1P37275 1124 aaPredicted RBP6.27□□□□□ -1.41
LRRK2-204ENST00000430804 PLEKHD1A6NEE1 506 aa6.26□□□□□ -1.41
LRRK2-204ENST00000430804 LMOD2Q6P5Q4 547 aa6.26□□□□□ -1.41
LRRK2-204ENST00000430804 SENP3Q9H4L4 574 aaPredicted RBP6.26□□□□□ -1.41
LRRK2-204ENST00000430804 RB1CC1Q8TDY2 1594 aa6.26□□□□□ -1.41
LRRK2-204ENST00000430804 CCDC9Q9Y3X0 531 aaKnown RBP6.25□□□□□ -1.41
LRRK2-204ENST00000430804 CNGB1Q14028 1251 aaPredicted RBP6.25□□□□□ -1.41
LRRK2-204ENST00000430804 SF3B2Q13435 895 aaKnown RBP6.23□□□□□ -1.41
LRRK2-204ENST00000430804 PLEKHG5O94827 1062 aa6.23□□□□□ -1.41
LRRK2-204ENST00000430804 P3H3Q8IVL6 736 aa6.22□□□□□ -1.41
LRRK2-204ENST00000430804 ARXQ96QS3 562 aa6.22□□□□□ -1.41
LRRK2-204ENST00000430804 CANXP27824 592 aaKnown RBP6.22□□□□□ -1.41
LRRK2-204ENST00000430804 CDK11BP21127 795 aaKnown RBP6.21□□□□□ -1.42
LRRK2-204ENST00000430804 GOLGA2Q08379 1002 aa6.2□□□□□ -1.42
LRRK2-204ENST00000430804 OSCARQ8IYS5 282 aa6.2□□□□□ -1.42
LRRK2-204ENST00000430804 MLECQ14165 292 aa6.19□□□□□ -1.42
LRRK2-204ENST00000430804 SCRIBQ14160 1630 aa6.19□□□□□ -1.42
LRRK2-204ENST00000430804 CENPBP07199 599 aaPredicted RBP6.19□□□□□ -1.42
LRRK2-204ENST00000430804 KRI1Q8N9T8 703 aaKnown RBP6.18□□□□□ -1.42
LRRK2-204ENST00000430804 ACIN1Q9UKV3 1341 aaKnown RBP6.18□□□□□ -1.42
LRRK2-204ENST00000430804 EID1Q9Y6B2 187 aa6.17□□□□□ -1.42
LRRK2-204ENST00000430804 HMGB2P26583 209 aaKnown RBP6.15□□□□□ -1.42
LRRK2-204ENST00000430804 KANK1Q14678 1352 aa6.13□□□□□ -1.43
LRRK2-204ENST00000430804 PDS5BQ9NTI5 1447 aa6.13□□□□□ -1.43
LRRK2-204ENST00000430804 POGKQ9P215 609 aa6.12□□□□□ -1.43
LRRK2-204ENST00000430804 G3V3G9 751 aa6.12□□□□□ -1.43
LRRK2-204ENST00000430804 DCAF8Q5TAQ9 597 aa6.12□□□□□ -1.43
LRRK2-204ENST00000430804 CYB5RLQ6IPT4 315 aa6.12□□□□□ -1.43
LRRK2-204ENST00000430804 ZNF316A6NFI3 1004 aaPredicted RBP6.12□□□□□ -1.43
LRRK2-204ENST00000430804 CSB-PGBD3P0DP91 1061 aa6.11□□□□□ -1.43
LRRK2-204ENST00000430804 BCL11AQ9H165 835 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms