RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 EVI5O60447 810 aa18.27■□□□□ 0.52
RIF1-204ENST00000430328 PPWD1Q96BP3 646 aaKnown RBP18.27■□□□□ 0.52
RIF1-204ENST00000430328 MAFGO15525 162 aa18.27■□□□□ 0.52
RIF1-204ENST00000430328 XRCC6P12956 609 aaKnown RBP eCLIP18.27■□□□□ 0.528e-6■■□□□ 12.6
RIF1-204ENST00000430328 ESR2Q92731 530 aa18.27■□□□□ 0.52
RIF1-204ENST00000430328 RPSAP08865 295 aaKnown RBP18.27■□□□□ 0.51
RIF1-204ENST00000430328 PRIM1P49642 420 aaKnown RBP18.27■□□□□ 0.51
RIF1-204ENST00000430328 ASIC2Q16515 512 aa18.26■□□□□ 0.51
RIF1-204ENST00000430328 CCDC105Q8IYK2 499 aa18.26■□□□□ 0.51
RIF1-204ENST00000430328 CCDC68Q9H2F9 335 aa18.26■□□□□ 0.51
RIF1-204ENST00000430328 LMNAP02545 664 aaKnown RBP18.26■□□□□ 0.51
RIF1-204ENST00000430328 CTAGE3PQ8IX95 158 aa18.26■□□□□ 0.51
RIF1-204ENST00000430328 TRIM56Q9BRZ2 755 aaKnown RBP18.26■□□□□ 0.51
RIF1-204ENST00000430328 TTLL3Q9Y4R7 772 aa18.26■□□□□ 0.51
RIF1-204ENST00000430328 KRT2P35908 639 aa18.26■□□□□ 0.51
RIF1-204ENST00000430328 TSKSQ9UJT2 592 aa18.26■□□□□ 0.51
RIF1-204ENST00000430328 GNGT2O14610 69 aa18.26■□□□□ 0.51
RIF1-204ENST00000430328 EEF1B2P24534 225 aaKnown RBP18.26■□□□□ 0.51
RIF1-204ENST00000430328 BIRC3Q13489 604 aa18.26■□□□□ 0.51
RIF1-204ENST00000430328 FBXO41Q8TF61 875 aa18.26■□□□□ 0.51
RIF1-204ENST00000430328 HAUS1Q96CS2 278 aa18.26■□□□□ 0.51
RIF1-204ENST00000430328 NOC4LQ9BVI4 516 aaKnown RBP18.26■□□□□ 0.51
RIF1-204ENST00000430328 TMEM132EQ6IEE7 984 aa18.26■□□□□ 0.51
RIF1-204ENST00000430328 NAP1L4Q99733 375 aaKnown RBP18.26■□□□□ 0.51
RIF1-204ENST00000430328 TRIM55Q9BYV6 548 aa18.26■□□□□ 0.51
RIF1-204ENST00000430328 NACA2Q9H009 215 aa18.26■□□□□ 0.51
RIF1-204ENST00000430328 PYGLP06737 847 aa18.25■□□□□ 0.51
RIF1-204ENST00000430328 GRAMD4Q6IC98 578 aa18.25■□□□□ 0.51
RIF1-204ENST00000430328 NBPF3Q9H094 633 aa18.25■□□□□ 0.51
RIF1-204ENST00000430328 SCOCQ9UIL1 159 aa18.25■□□□□ 0.51
RIF1-204ENST00000430328 ALDH1L2Q3SY69 923 aa18.25■□□□□ 0.51
RIF1-204ENST00000430328 PPARDQ03181 441 aa18.25■□□□□ 0.51
RIF1-204ENST00000430328 PALM2Q8IXS6 379 aa18.25■□□□□ 0.51
RIF1-204ENST00000430328 MAIP1Q8WWC4 291 aa18.25■□□□□ 0.51
RIF1-204ENST00000430328 TMX3Q96JJ7 454 aa18.25■□□□□ 0.51
RIF1-204ENST00000430328 ECHDC1Q9NTX5 307 aa18.25■□□□□ 0.51
RIF1-204ENST00000430328 CCDC92Q53HC0 331 aaPredicted RBP18.24■□□□□ 0.51
RIF1-204ENST00000430328 CENPKQ9BS16 269 aa18.24■□□□□ 0.51
RIF1-204ENST00000430328 NUP58Q9BVL2 599 aa18.24■□□□□ 0.51
RIF1-204ENST00000430328 CCDC159P0C7I6 412 aa18.24■□□□□ 0.51
RIF1-204ENST00000430328 CCDC13Q8IYE1 715 aa18.24■□□□□ 0.51
RIF1-204ENST00000430328 NKTRP30414 1462 aaKnown RBP18.24■□□□□ 0.51
RIF1-204ENST00000430328 NFE2L2Q16236 605 aa18.24■□□□□ 0.51
RIF1-204ENST00000430328 CFAP70Q5T0N1 1121 aa18.24■□□□□ 0.51
RIF1-204ENST00000430328 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.24■□□□□ 0.51
RIF1-204ENST00000430328 ZBBXA8MT70 800 aa18.24■□□□□ 0.51
RIF1-204ENST00000430328 C6orf229H3BNL8 230 aa18.24■□□□□ 0.51
RIF1-204ENST00000430328 ANKRD42Q8N9B4 389 aa18.24■□□□□ 0.51
RIF1-204ENST00000430328 IGSF22Q8N9C0 903 aa18.24■□□□□ 0.51
RIF1-204ENST00000430328 CDC5LQ99459 802 aaKnown RBP18.24■□□□□ 0.51
RIF1-204ENST00000430328 EFHD1Q9BUP0 239 aa18.24■□□□□ 0.51
RIF1-204ENST00000430328 YY1AP1Q9H869 796 aa18.24■□□□□ 0.51
RIF1-204ENST00000430328 FHOD3Q2V2M9 1422 aa18.23■□□□□ 0.51
RIF1-204ENST00000430328 KRT10P13645 584 aa18.23■□□□□ 0.51
RIF1-204ENST00000430328 DNM1Q05193 864 aaKnown RBP18.23■□□□□ 0.51
RIF1-204ENST00000430328 ELF2Q15723 593 aa18.23■□□□□ 0.51
RIF1-204ENST00000430328 SLC9C1Q4G0N8 1177 aa18.23■□□□□ 0.51
RIF1-204ENST00000430328 DCUN1D2Q6PH85 259 aa18.23■□□□□ 0.51
RIF1-204ENST00000430328 IQUBQ8NA54 791 aa18.23■□□□□ 0.51
RIF1-204ENST00000430328 POTEB3A0JP26 581 aa18.23■□□□□ 0.51
RIF1-204ENST00000430328 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.23■□□□□ 0.51
RIF1-204ENST00000430328 POTEBQ6S5H4 581 aa18.23■□□□□ 0.51
RIF1-204ENST00000430328 FAM186BQ8IYM0 893 aa18.23■□□□□ 0.51
RIF1-204ENST00000430328 TBC1D8BQ0IIM8 1120 aa18.23■□□□□ 0.51
RIF1-204ENST00000430328 CWF19L2Q2TBE0 894 aaKnown RBP18.23■□□□□ 0.51
RIF1-204ENST00000430328 ANKRD35Q8N283 1001 aa18.23■□□□□ 0.51
RIF1-204ENST00000430328 GTPBP10A4D1E9 387 aaKnown RBP18.23■□□□□ 0.51
RIF1-204ENST00000430328 TRAF5O00463 557 aa18.23■□□□□ 0.51
RIF1-204ENST00000430328 SART1O43290 800 aaKnown RBP18.23■□□□□ 0.51
RIF1-204ENST00000430328 VPS37BQ9H9H4 285 aa18.23■□□□□ 0.51
RIF1-204ENST00000430328 DDX41Q9UJV9 622 aaKnown RBP18.23■□□□□ 0.51
RIF1-204ENST00000430328 RAD51AP2Q09MP3 1159 aa18.23■□□□□ 0.51
RIF1-204ENST00000430328 SECISBP2LQ93073 1101 aaKnown RBP18.23■□□□□ 0.51
RIF1-204ENST00000430328 CARD6Q9BX69 1037 aa18.23■□□□□ 0.51
RIF1-204ENST00000430328 TRMT112Q9UI30 125 aaKnown RBP18.23■□□□□ 0.51
RIF1-204ENST00000430328 ANGPTL3Q9Y5C1 460 aa18.23■□□□□ 0.51
RIF1-204ENST00000430328 SMTNP53814 917 aa18.22■□□□□ 0.51
RIF1-204ENST00000430328 NECAB1Q8N987 351 aa18.22■□□□□ 0.51
RIF1-204ENST00000430328 COPG1Q9Y678 874 aaKnown RBP18.22■□□□□ 0.51
RIF1-204ENST00000430328 PLEKHH2Q8IVE3 1493 aa18.22■□□□□ 0.51
RIF1-204ENST00000430328 MYL5Q02045 173 aa18.22■□□□□ 0.51
RIF1-204ENST00000430328 PLS1Q14651 629 aa18.22■□□□□ 0.51
RIF1-204ENST00000430328 BMP2KLQ5H9B9 411 aa18.22■□□□□ 0.51
RIF1-204ENST00000430328 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.22■□□□□ 0.51
RIF1-204ENST00000430328 RSAD2Q8WXG1 361 aa18.22■□□□□ 0.51
RIF1-204ENST00000430328 SCYL1Q96KG9 808 aa18.22■□□□□ 0.51
RIF1-204ENST00000430328 KIF11P52732 1056 aa18.22■□□□□ 0.51
RIF1-204ENST00000430328 HP1BP3Q5SSJ5 553 aaPredicted RBP18.22■□□□□ 0.51
RIF1-204ENST00000430328 PFDN6O15212 129 aa18.22■□□□□ 0.51
RIF1-204ENST00000430328 HSPA8P11142 646 aaKnown RBP18.21■□□□□ 0.51
RIF1-204ENST00000430328 NUCB1Q02818 461 aa18.21■□□□□ 0.51
RIF1-204ENST00000430328 KCNA4P22459 653 aa18.21■□□□□ 0.51
RIF1-204ENST00000430328 NEK2P51955 445 aa18.21■□□□□ 0.51
RIF1-204ENST00000430328 RRP36Q96EU6 259 aaKnown RBP18.21■□□□□ 0.51
RIF1-204ENST00000430328 CASP2P42575 452 aa18.21■□□□□ 0.51
RIF1-204ENST00000430328 RIOK1Q9BRS2 568 aaKnown RBP18.21■□□□□ 0.51
RIF1-204ENST00000430328 GNA11P29992 359 aa18.21■□□□□ 0.51
RIF1-204ENST00000430328 ZGPATQ8N5A5 531 aaKnown RBP18.21■□□□□ 0.51
RIF1-204ENST00000430328 CTNNA1P35221 906 aaKnown RBP18.21■□□□□ 0.51
RIF1-204ENST00000430328 POLE2P56282 527 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms