RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 TDRD3Q9H7E2 651 aaKnown RBP25.58■■□□□ 1.69
ABCF3-202ENST00000421340 TMOD2Q9NZR1 351 aa25.58■■□□□ 1.69
ABCF3-202ENST00000421340 TAOK2Q9UL54 1235 aa25.58■■□□□ 1.69
ABCF3-202ENST00000421340 E7EWF7 191 aa25.57■■□□□ 1.68
ABCF3-202ENST00000421340 WNT10BO00744 389 aa25.57■■□□□ 1.68
ABCF3-202ENST00000421340 ENTPD3O75355 529 aa25.57■■□□□ 1.68
ABCF3-202ENST00000421340 DDNO94850 711 aaPredicted RBP25.57■■□□□ 1.68
ABCF3-202ENST00000421340 HMGB1P09429 215 aaKnown RBP25.57■■□□□ 1.68
ABCF3-202ENST00000421340 NT5C2P49902 561 aa25.57■■□□□ 1.68
ABCF3-202ENST00000421340 C12orf60Q5U649 245 aa25.57■■□□□ 1.68
ABCF3-202ENST00000421340 L3MBTL3Q96JM7 780 aaPredicted RBP25.57■■□□□ 1.68
ABCF3-202ENST00000421340 RNF41Q9H4P4 317 aaPredicted RBP25.57■■□□□ 1.68
ABCF3-202ENST00000421340 ZSWIM6Q9HCJ5 1215 aa25.57■■□□□ 1.68
ABCF3-202ENST00000421340 ZNF70Q9UC06 446 aaPredicted RBP25.57■■□□□ 1.68
ABCF3-202ENST00000421340 SLC3A2P08195 630 aaKnown RBP25.56■■□□□ 1.68
ABCF3-202ENST00000421340 FGRP09769 529 aa25.56■■□□□ 1.68
ABCF3-202ENST00000421340 STAG1Q8WVM7 1258 aa25.56■■□□□ 1.68
ABCF3-202ENST00000421340 NEK1Q96PY6 1258 aa25.56■■□□□ 1.68
ABCF3-202ENST00000421340 NBPF3Q9H094 633 aa25.56■■□□□ 1.68
ABCF3-202ENST00000421340 SHTN1A0MZ66 631 aa25.55■■□□□ 1.68
ABCF3-202ENST00000421340 GLTPD2A6NH11 291 aa25.55■■□□□ 1.68
ABCF3-202ENST00000421340 MINDY4BA8MYZ0 360 aa25.55■■□□□ 1.68
ABCF3-202ENST00000421340 HAND2P61296 217 aa25.55■■□□□ 1.68
ABCF3-202ENST00000421340 ADCK5Q3MIX3 580 aa25.55■■□□□ 1.68
ABCF3-202ENST00000421340 AKNAD1Q5T1N1 836 aa25.55■■□□□ 1.68
ABCF3-202ENST00000421340 TTC6Q86TZ1 520 aa25.55■■□□□ 1.68
ABCF3-202ENST00000421340 JAKMIP1Q96N16 626 aaKnown RBP25.55■■□□□ 1.68
ABCF3-202ENST00000421340 OSBPL5Q9H0X9 879 aaPredicted RBP25.55■■□□□ 1.68
ABCF3-202ENST00000421340 DHX36Q9H2U1 1008 aaKnown RBP25.55■■□□□ 1.68
ABCF3-202ENST00000421340 DDX4Q9NQI0 724 aaKnown RBP25.55■■□□□ 1.68
ABCF3-202ENST00000421340 TAF6LQ9Y6J9 622 aa25.55■■□□□ 1.68
ABCF3-202ENST00000421340 TIAM2Q8IVF5 1701 aa25.54■■□□□ 1.68
ABCF3-202ENST00000421340 POLR3DP05423 398 aaPredicted RBP25.54■■□□□ 1.68
ABCF3-202ENST00000421340 LMOD1P29536 600 aaPredicted RBP25.54■■□□□ 1.68
ABCF3-202ENST00000421340 NFIAQ12857 509 aa25.54■■□□□ 1.68
ABCF3-202ENST00000421340 STOX1Q6ZVD7 989 aa25.54■■□□□ 1.68
ABCF3-202ENST00000421340 CNNM2Q9H8M5 875 aa25.54■■□□□ 1.68
ABCF3-202ENST00000421340 FAM198AQ9UFP1 575 aa25.54■■□□□ 1.68
ABCF3-202ENST00000421340 ANP32AP39687 249 aaKnown RBP25.53■■□□□ 1.68
ABCF3-202ENST00000421340 PICALMQ13492 652 aa25.53■■□□□ 1.68
ABCF3-202ENST00000421340 KIF4BQ2VIQ3 1234 aa25.53■■□□□ 1.68
ABCF3-202ENST00000421340 NBPF9Q3BBW0 867 aa25.53■■□□□ 1.68
ABCF3-202ENST00000421340 MFSD6Q6ZSS7 791 aa25.53■■□□□ 1.68
ABCF3-202ENST00000421340 RUFY3Q7L099 469 aa25.53■■□□□ 1.68
ABCF3-202ENST00000421340 SAMD7Q7Z3H4 446 aa25.53■■□□□ 1.68
ABCF3-202ENST00000421340 FAM83AQ86UY5 434 aa25.53■■□□□ 1.68
ABCF3-202ENST00000421340 TBC1D10CQ8IV04 446 aa25.53■■□□□ 1.68
ABCF3-202ENST00000421340 NCOA7Q8NI08 942 aa25.53■■□□□ 1.68
ABCF3-202ENST00000421340 CYP46A1Q9Y6A2 500 aa25.53■■□□□ 1.68
ABCF3-202ENST00000421340 ROBO3Q96MS0 1386 aa25.53■■□□□ 1.68
ABCF3-202ENST00000421340 GOLGB1Q14789 3259 aaKnown RBP25.53■■□□□ 1.68
ABCF3-202ENST00000421340 COL2A1P02458 1487 aaPredicted RBP25.53■■□□□ 1.68
ABCF3-202ENST00000421340 TRDNQ13061 729 aa25.52■■□□□ 1.68
ABCF3-202ENST00000421340 KRT23Q9C075 422 aa25.52■■□□□ 1.68
ABCF3-202ENST00000421340 ALDH8A1Q9H2A2 487 aaPredicted RBP25.52■■□□□ 1.68
ABCF3-202ENST00000421340 ADARB2Q9NS39 739 aaKnown RBP25.52■■□□□ 1.68
ABCF3-202ENST00000421340 ADAMTSL1Q8N6G6 1762 aa25.51■■□□□ 1.67
ABCF3-202ENST00000421340 CASTP20810 708 aaKnown RBP25.51■■□□□ 1.67
ABCF3-202ENST00000421340 EPS15P42566 896 aa25.51■■□□□ 1.67
ABCF3-202ENST00000421340 CTDSPL2Q05D32 466 aa25.51■■□□□ 1.67
ABCF3-202ENST00000421340 TBC1D10BQ4KMP7 808 aaPredicted RBP25.51■■□□□ 1.67
ABCF3-202ENST00000421340 BLOC1S2Q6QNY1 142 aa25.51■■□□□ 1.67
ABCF3-202ENST00000421340 FAM151AQ8WW52 585 aa25.51■■□□□ 1.67
ABCF3-202ENST00000421340 SNX21Q969T3 373 aa25.51■■□□□ 1.67
ABCF3-202ENST00000421340 ZNF287Q9HBT7 754 aa25.51■■□□□ 1.67
ABCF3-202ENST00000421340 CYP2D7A0A087X1C5 515 aa25.5■■□□□ 1.67
ABCF3-202ENST00000421340 ORC4O43929 436 aa25.5■■□□□ 1.67
ABCF3-202ENST00000421340 ST18O60284 1047 aa25.5■■□□□ 1.67
ABCF3-202ENST00000421340 CYP2D6P10635 497 aa25.5■■□□□ 1.67
ABCF3-202ENST00000421340 RPS6KB1P23443 525 aa25.5■■□□□ 1.67
ABCF3-202ENST00000421340 NEK4P51957 841 aa25.5■■□□□ 1.67
ABCF3-202ENST00000421340 PDE4BQ07343 736 aa25.5■■□□□ 1.67
ABCF3-202ENST00000421340 RBM26Q5T8P6 1007 aaKnown RBP25.5■■□□□ 1.67
ABCF3-202ENST00000421340 ATRNL1Q5VV63 1379 aa25.5■■□□□ 1.67
ABCF3-202ENST00000421340 DHX32Q7L7V1 743 aaKnown RBP25.5■■□□□ 1.67
ABCF3-202ENST00000421340 EHD4Q9H223 541 aa25.5■■□□□ 1.67
ABCF3-202ENST00000421340 SAP30BPQ9UHR5 308 aaKnown RBP25.5■■□□□ 1.67
ABCF3-202ENST00000421340 WDR19Q8NEZ3 1342 aa25.49■■□□□ 1.67
ABCF3-202ENST00000421340 EGFRP00533 1210 aa25.49■■□□□ 1.67
ABCF3-202ENST00000421340 HLA-DOAP06340 250 aa25.49■■□□□ 1.67
ABCF3-202ENST00000421340 TNNI2P48788 182 aa25.49■■□□□ 1.67
ABCF3-202ENST00000421340 PLCD1P51178 756 aa25.49■■□□□ 1.67
ABCF3-202ENST00000421340 CACNB3P54284 484 aa25.49■■□□□ 1.67
ABCF3-202ENST00000421340 TNFAIP1Q13829 316 aa25.49■■□□□ 1.67
ABCF3-202ENST00000421340 RALYLQ86SE5 291 aaKnown RBP25.49■■□□□ 1.67
ABCF3-202ENST00000421340 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.49■■□□□ 1.67
ABCF3-202ENST00000421340 CLRN2A0PK11 232 aa25.48■■□□□ 1.67
ABCF3-202ENST00000421340 EXOSC10Q01780 885 aaKnown RBP25.48■■□□□ 1.67
ABCF3-202ENST00000421340 FOXP4Q8IVH2 680 aaPredicted RBP25.48■■□□□ 1.67
ABCF3-202ENST00000421340 ZFPM1Q8IX07 1006 aa25.48■■□□□ 1.67
ABCF3-202ENST00000421340 MB21D2Q8IYB1 491 aaPredicted RBP25.48■■□□□ 1.67
ABCF3-202ENST00000421340 FBXL16Q8N461 479 aa25.48■■□□□ 1.67
ABCF3-202ENST00000421340 TTC14Q96N46 770 aa25.48■■□□□ 1.67
ABCF3-202ENST00000421340 MTA3Q9BTC8 594 aa25.48■■□□□ 1.67
ABCF3-202ENST00000421340 PI4KBQ9UBF8 816 aa25.48■■□□□ 1.67
ABCF3-202ENST00000421340 HACL1Q9UJ83 578 aa25.48■■□□□ 1.67
ABCF3-202ENST00000421340 TACC3Q9Y6A5 838 aa25.48■■□□□ 1.67
ABCF3-202ENST00000421340 FOCADQ5VW36 1801 aa25.48■■□□□ 1.67
ABCF3-202ENST00000421340 LAMA4Q16363 1823 aa25.47■■□□□ 1.67
ABCF3-202ENST00000421340 MCM5P33992 734 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms