RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 ARAP3Q8WWN8 1544 aa11.47□□□□□ -0.57
SATB1-204ENST00000417717 RGS16O15492 202 aaPredicted RBP11.47□□□□□ -0.57
SATB1-204ENST00000417717 DEUP1Q05D60 604 aa11.47□□□□□ -0.57
SATB1-204ENST00000417717 TMCO4Q5TGY1 634 aa11.47□□□□□ -0.57
SATB1-204ENST00000417717 HHATQ5VTY9 493 aa11.47□□□□□ -0.57
SATB1-204ENST00000417717 WDR75Q8IWA0 830 aaKnown RBP11.47□□□□□ -0.57
SATB1-204ENST00000417717 TMEM63CQ9P1W3 806 aa11.47□□□□□ -0.57
SATB1-204ENST00000417717 IQCA1LA6NCM1 817 aa11.47□□□□□ -0.57
SATB1-204ENST00000417717 APOEP02649 317 aa11.47□□□□□ -0.57
SATB1-204ENST00000417717 SRGAP1Q7Z6B7 1085 aa11.47□□□□□ -0.57
SATB1-204ENST00000417717 LZICQ8WZA0 190 aa11.47□□□□□ -0.57
SATB1-204ENST00000417717 CNGB3Q9NQW8 809 aa11.47□□□□□ -0.57
SATB1-204ENST00000417717 ETAA1Q9NY74 926 aa11.47□□□□□ -0.57
SATB1-204ENST00000417717 GJC2Q5T442 439 aaPredicted RBP11.46□□□□□ -0.57
SATB1-204ENST00000417717 NUDCD3Q8IVD9 361 aa11.46□□□□□ -0.57
SATB1-204ENST00000417717 TSR2Q969E8 191 aaKnown RBP11.46□□□□□ -0.57
SATB1-204ENST00000417717 EPSTI1Q96J88 318 aa11.46□□□□□ -0.57
SATB1-204ENST00000417717 COG3Q96JB2 828 aa11.46□□□□□ -0.57
SATB1-204ENST00000417717 KLC4Q9NSK0 619 aa11.46□□□□□ -0.57
SATB1-204ENST00000417717 SAR1BQ9Y6B6 198 aa11.46□□□□□ -0.57
SATB1-204ENST00000417717 BMP15O95972 392 aa11.46□□□□□ -0.57
SATB1-204ENST00000417717 HSPA1LP34931 641 aa11.46□□□□□ -0.57
SATB1-204ENST00000417717 GUCY1B3Q02153 619 aa11.46□□□□□ -0.57
SATB1-204ENST00000417717 PSMD6Q15008 389 aa11.46□□□□□ -0.57
SATB1-204ENST00000417717 INAQ16352 499 aa11.46□□□□□ -0.57
SATB1-204ENST00000417717 CFAP221Q4G0U5 840 aa11.46□□□□□ -0.57
SATB1-204ENST00000417717 FCHSD1Q86WN1 690 aa11.46□□□□□ -0.57
SATB1-204ENST00000417717 PARVBQ9HBI1 364 aa11.46□□□□□ -0.57
SATB1-204ENST00000417717 PFDN4Q9NQP4 134 aa11.46□□□□□ -0.57
SATB1-204ENST00000417717 TXLNGQ9NUQ3 528 aa11.46□□□□□ -0.57
SATB1-204ENST00000417717 STOML1Q9UBI4 398 aa11.46□□□□□ -0.57
SATB1-204ENST00000417717 PSMA7O14818 248 aa11.46□□□□□ -0.58
SATB1-204ENST00000417717 CTNNA1P35221 906 aaKnown RBP11.46□□□□□ -0.58
SATB1-204ENST00000417717 NAIF1Q69YI7 327 aaPredicted RBP11.46□□□□□ -0.58
SATB1-204ENST00000417717 SPTLC3Q9NUV7 552 aa11.46□□□□□ -0.58
SATB1-204ENST00000417717 AATFQ9NY61 560 aaKnown RBP eCLIP11.46□□□□□ -0.58
SATB1-204ENST00000417717 ANGPTL2Q9UKU9 493 aa11.46□□□□□ -0.58
SATB1-204ENST00000417717 PZPP20742 1482 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 KDM1AO60341 852 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 ACTN3Q08043 901 aaPredicted RBP11.45□□□□□ -0.58
SATB1-204ENST00000417717 TTC22Q5TAA0 569 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 PARP9Q8IXQ6 854 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 CCDC144CPQ8IYA2 1237 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 KIF1BPQ96EK5 621 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 BICD1Q96G01 975 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 RAB34Q9BZG1 259 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 UBAP1Q9NZ09 502 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 FAM135AQ9P2D6 1515 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 TPP2P29144 1249 aaPredicted RBP11.45□□□□□ -0.58
SATB1-204ENST00000417717 STRN4Q9NRL3 753 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 G3BP2Q9UN86 482 aaKnown RBP11.45□□□□□ -0.58
SATB1-204ENST00000417717 TEX14Q8IWB6 1497 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 TRIM66O15016 1216 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 FCHSD2O94868 740 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 CCDC159P0C7I6 412 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 FANCCQ00597 558 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.45□□□□□ -0.58
SATB1-204ENST00000417717 CLSTN2Q9H4D0 955 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 SEC31AO94979 1220 aaKnown RBP11.45□□□□□ -0.58
SATB1-204ENST00000417717 DRP2Q13474 957 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 HMG20BQ9P0W2 317 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 MBD5Q9P267 1494 aa11.45□□□□□ -0.58
SATB1-204ENST00000417717 S100BP04271 92 aaPredicted RBP11.44□□□□□ -0.58
SATB1-204ENST00000417717 ABCD1P33897 745 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 MLECQ14165 292 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 ALDH1L2Q3SY69 923 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 FAM133BQ5BKY9 247 aaKnown RBP11.44□□□□□ -0.58
SATB1-204ENST00000417717 C16orf87Q6PH81 154 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 SAMD1Q6SPF0 538 aaPredicted RBP11.44□□□□□ -0.58
SATB1-204ENST00000417717 LRRC8AQ8IWT6 810 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 IGSF22Q8N9C0 903 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 NLRP7Q8WX94 980 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 NECTIN2Q92692 538 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 PHLPP2Q6ZVD8 1323 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 STXBP3O00186 592 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 EEF2P13639 858 aaKnown RBP11.44□□□□□ -0.58
SATB1-204ENST00000417717 DENND2CQ68D51 928 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.44□□□□□ -0.58
SATB1-204ENST00000417717 FERMT1Q9BQL6 677 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 TUBB6Q9BUF5 446 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 PPP1R1BQ9UD71 204 aaPredicted RBP11.44□□□□□ -0.58
SATB1-204ENST00000417717 CDC23Q9UJX2 597 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 PYCARDQ9ULZ3 195 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 RALGAPBQ86X10 1494 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 hCG_2014768A0A024R1R8 64 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 ANKRD65E5RJM6 399 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 RAD21O60216 631 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 CAND2O75155 1236 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 MTHFSP49914 203 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 RRAGBQ5VZM2 374 aa11.44□□□□□ -0.58
SATB1-204ENST00000417717 HELBQ8NG08 1087 aaPredicted RBP11.44□□□□□ -0.58
SATB1-204ENST00000417717 ARHGAP42A6NI28 874 aa11.43□□□□□ -0.58
SATB1-204ENST00000417717 APOBRQ0VD83 1088 aa11.43□□□□□ -0.58
SATB1-204ENST00000417717 HSP90AA4PQ58FG1 418 aa11.43□□□□□ -0.58
SATB1-204ENST00000417717 EEF1DP29692 281 aaKnown RBP11.43□□□□□ -0.58
SATB1-204ENST00000417717 ZGPATQ8N5A5 531 aaKnown RBP11.43□□□□□ -0.58
SATB1-204ENST00000417717 ARIH1Q9Y4X5 557 aaPredicted RBP11.43□□□□□ -0.58
SATB1-204ENST00000417717 CCDC169A6NNP5 214 aa11.43□□□□□ -0.58
SATB1-204ENST00000417717 I3L4J1 428 aa11.43□□□□□ -0.58
SATB1-204ENST00000417717 OCA2Q04671 838 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms