RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 CITED4Q96RK1 184 aa6.3□□□□□ -1.4
VPS41-205ENST00000414632 BCL11AQ9H165 835 aa6.3□□□□□ -1.4
VPS41-205ENST00000414632 LAMB2P55268 1798 aa6.3□□□□□ -1.4
VPS41-205ENST00000414632 C10orf71Q711Q0 1435 aa6.3□□□□□ -1.4
VPS41-205ENST00000414632 CCDC88AQ3V6T2 1871 aa6.3□□□□□ -1.4
VPS41-205ENST00000414632 ARFGEF1Q9Y6D6 1849 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 PXDNLA1KZ92 1463 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 A0A0G2JLW4 131 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 POLRMTO00411 1230 aaKnown RBP6.29□□□□□ -1.4
VPS41-205ENST00000414632 WNT7AO00755 349 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 TCERG1O14776 1098 aaKnown RBP6.29□□□□□ -1.4
VPS41-205ENST00000414632 ZBTB39O15060 712 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 TREHO43280 583 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 FZD6O60353 706 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 SERPINB2P05120 415 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 ZNF853P0CG23 659 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 TM4SF1P30408 202 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 GNAI1P63096 354 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 PLCB3Q01970 1234 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 AIMP1Q12904 312 aaKnown RBP6.29□□□□□ -1.4
VPS41-205ENST00000414632 HLFQ16534 295 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 GPR162Q16538 588 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 DUSP27Q5VZP5 1158 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 C8orf58Q8NAV2 365 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 CNKSR1Q969H4 720 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 IFT57Q9NWB7 429 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 BABAM1Q9NWV8 329 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 CHPF2Q9P2E5 772 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 LRFN2Q9ULH4 789 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 USP3Q9Y6I4 520 aa6.29□□□□□ -1.4
VPS41-205ENST00000414632 TAF1P21675 1872 aa6.28□□□□□ -1.4
VPS41-205ENST00000414632 DPEP1P16444 411 aa6.28□□□□□ -1.4
VPS41-205ENST00000414632 YBX3P16989 372 aaKnown RBP eCLIP6.28□□□□□ -1.4
VPS41-205ENST00000414632 GPTP24298 496 aa6.28□□□□□ -1.4
VPS41-205ENST00000414632 CHRNA5P30532 468 aa6.28□□□□□ -1.4
VPS41-205ENST00000414632 CALD1Q05682 793 aaKnown RBP6.28□□□□□ -1.4
VPS41-205ENST00000414632 TLR1Q15399 786 aa6.28□□□□□ -1.4
VPS41-205ENST00000414632 KIF6Q6ZMV9 814 aa6.28□□□□□ -1.4
VPS41-205ENST00000414632 TSPYL6Q8N831 410 aa6.28□□□□□ -1.4
VPS41-205ENST00000414632 EMID1Q96A84 441 aaPredicted RBP6.28□□□□□ -1.4
VPS41-205ENST00000414632 MRGPRX2Q96LB1 330 aa6.28□□□□□ -1.4
VPS41-205ENST00000414632 ESYT1Q9BSJ8 1104 aa6.28□□□□□ -1.4
VPS41-205ENST00000414632 PLA2G2EQ9NZK7 142 aa6.28□□□□□ -1.4
VPS41-205ENST00000414632 IQSEC3Q9UPP2 1182 aaPredicted RBP6.28□□□□□ -1.4
VPS41-205ENST00000414632 CHMP3Q9Y3E7 222 aa6.28□□□□□ -1.4
VPS41-205ENST00000414632 CD2APQ9Y5K6 639 aa6.28□□□□□ -1.4
VPS41-205ENST00000414632 DDX60Q8IY21 1712 aaKnown RBP6.28□□□□□ -1.4
VPS41-205ENST00000414632 FANCIQ9NVI1 1328 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 SERTM1A2A2V5 107 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 CCER2I3L3R5 266 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 NPHP1O15259 732 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 RECKO95980 971 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 DSC3Q14574 896 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 TSNAXIP1Q2TAA8 658 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 FAM26DQ5JW98 314 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 IFFO2Q5TF58 517 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 COPS6Q7L5N1 327 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 LRP10Q7Z4F1 713 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 KDF1Q8NAX2 398 aaPredicted RBP6.27□□□□□ -1.41
VPS41-205ENST00000414632 XAGE3Q8WTP9 111 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 MYO19Q96H55 970 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 BACH2Q9BYV9 841 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 ZNF232Q9UNY5 417 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 NIP7Q9Y221 180 aaKnown RBP eCLIP6.27□□□□□ -1.41
VPS41-205ENST00000414632 HCN4Q9Y3Q4 1203 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 HRH3Q9Y5N1 445 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 CACNA1FO60840 1977 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 SLX4Q8IY92 1834 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 SPEF2Q9C093 1822 aa6.27□□□□□ -1.41
VPS41-205ENST00000414632 MAP3K15Q6ZN16 1313 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 UBN2Q6ZU65 1347 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 EML1O00423 815 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 ALDH1A1P00352 501 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 LDHBP07195 334 aaKnown RBP6.26□□□□□ -1.41
VPS41-205ENST00000414632 ADH1AP07327 375 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 BRD2P25440 801 aaKnown RBP6.26□□□□□ -1.41
VPS41-205ENST00000414632 SLC19A1P41440 591 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 MAPK8P45983 427 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 CENPCQ03188 943 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 EXOSC9Q06265 439 aaKnown RBP6.26□□□□□ -1.41
VPS41-205ENST00000414632 FMR1Q06787 632 aaKnown RBP eCLIP6.26□□□□□ -1.41
VPS41-205ENST00000414632 EHHADHQ08426 723 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 CBLBQ13191 982 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 CLN3Q13286 438 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 TEAD4Q15561 434 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 PRR5LQ6MZQ0 368 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 ATCAYQ86WG3 371 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 NBPF5PQ86XG9 351 aaPredicted RBP6.26□□□□□ -1.41
VPS41-205ENST00000414632 CNBD1Q8NA66 436 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 DMRTB1Q96MA1 342 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 SETDB2Q96T68 719 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 PRKD2Q9BZL6 878 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 PHAXQ9H814 394 aaKnown RBP6.26□□□□□ -1.41
VPS41-205ENST00000414632 DDX21Q9NR30 783 aaKnown RBP eCLIP6.26□□□□□ -1.41
VPS41-205ENST00000414632 BCS1LQ9Y276 419 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 ZNF652Q9Y2D9 606 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 SBF1O95248 1867 aa6.26□□□□□ -1.41
VPS41-205ENST00000414632 ERBB4Q15303 1308 aa6.25□□□□□ -1.41
VPS41-205ENST00000414632 TIAM2Q8IVF5 1701 aa6.25□□□□□ -1.41
VPS41-205ENST00000414632 IGHA2P01877 340 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms